RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 FCHSD2O94868 740 aa18.52■□□□□ 0.56
ABR-228ENST00000574437 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
ABR-228ENST00000574437 SNX21Q969T3 373 aa18.52■□□□□ 0.56
ABR-228ENST00000574437 TRIM44Q96DX7 344 aaPredicted RBP18.52■□□□□ 0.56
ABR-228ENST00000574437 TBC1D9Q6ZT07 1266 aa18.52■□□□□ 0.55
ABR-228ENST00000574437 RIMS2Q9UQ26 1411 aa18.51■□□□□ 0.55
ABR-228ENST00000574437 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
ABR-228ENST00000574437 ZBTB7BO15156 539 aaPredicted RBP18.51■□□□□ 0.55
ABR-228ENST00000574437 TNRQ92752 1358 aa18.5■□□□□ 0.55
ABR-228ENST00000574437 TXNDC2Q86VQ3 553 aa18.5■□□□□ 0.55
ABR-228ENST00000574437 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
ABR-228ENST00000574437 VAMP4O75379 141 aa18.49■□□□□ 0.55
ABR-228ENST00000574437 GAS2L3Q86XJ1 694 aa18.49■□□□□ 0.55
ABR-228ENST00000574437 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
ABR-228ENST00000574437 K7ELQ4 463 aaPredicted RBP18.48■□□□□ 0.55
ABR-228ENST00000574437 LTKP29376 864 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
ABR-228ENST00000574437 CLCN1P35523 988 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 MRPL50Q8N5N7 158 aaKnown RBP18.48■□□□□ 0.55
ABR-228ENST00000574437 SLC26A8Q96RN1 970 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 KIF2CQ99661 725 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 ARHGEF28Q8N1W1 1705 aaKnown RBP18.48■□□□□ 0.55
ABR-228ENST00000574437 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
ABR-228ENST00000574437 POLKQ9UBT6 870 aa18.48■□□□□ 0.55
ABR-228ENST00000574437 APBB1O00213 710 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 SSFA2P28290 1259 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 DDIT3P35638 169 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 RAB3GAP1Q15042 981 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 CIZ1Q9ULV3 898 aaPredicted RBP18.47■□□□□ 0.55
ABR-228ENST00000574437 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
ABR-228ENST00000574437 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
ABR-228ENST00000574437 TWISTNBQ3B726 338 aaPredicted RBP18.46■□□□□ 0.55
ABR-228ENST00000574437 SIRT2Q8IXJ6 389 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 UBE2Q2Q8WVN8 375 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 METP08581 1390 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 ESPNB1AK53 854 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
ABR-228ENST00000574437 GNAI1P63096 354 aa18.45■□□□□ 0.54
ABR-228ENST00000574437 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
ABR-228ENST00000574437 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
ABR-228ENST00000574437 CDC45O75419 566 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
ABR-228ENST00000574437 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 SKOR2Q2VWA4 1001 aaPredicted RBP18.44■□□□□ 0.54
ABR-228ENST00000574437 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
ABR-228ENST00000574437 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
ABR-228ENST00000574437 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
ABR-228ENST00000574437 NCKAP5LQ9HCH0 1330 aa18.43■□□□□ 0.54
ABR-228ENST00000574437 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
ABR-228ENST00000574437 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
ABR-228ENST00000574437 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
ABR-228ENST00000574437 C16orf71Q8IYS4 520 aaPredicted RBP18.41■□□□□ 0.54
ABR-228ENST00000574437 PTPRMP28827 1452 aa18.41■□□□□ 0.54
ABR-228ENST00000574437 PNPLA6Q8IY17 1366 aa18.41■□□□□ 0.54
ABR-228ENST00000574437 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
ABR-228ENST00000574437 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
ABR-228ENST00000574437 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
ABR-228ENST00000574437 CD163L1Q9NR16 1453 aa18.4■□□□□ 0.54
ABR-228ENST00000574437 NME9Q86XW9 330 aa18.4■□□□□ 0.54
ABR-228ENST00000574437 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
ABR-228ENST00000574437 IFT57Q9NWB7 429 aa18.4■□□□□ 0.54
ABR-228ENST00000574437 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
ABR-228ENST00000574437 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
ABR-228ENST00000574437 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
ABR-228ENST00000574437 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.53
ABR-228ENST00000574437 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
ABR-228ENST00000574437 ANP32BQ92688 251 aaKnown RBP18.38■□□□□ 0.53
ABR-228ENST00000574437 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
ABR-228ENST00000574437 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
ABR-228ENST00000574437 PTMSP20962 102 aa18.38■□□□□ 0.53
ABR-228ENST00000574437 PLEKHM2Q8IWE5 1019 aa18.38■□□□□ 0.53
ABR-228ENST00000574437 BAG4O95429 457 aaKnown RBP18.37■□□□□ 0.53
ABR-228ENST00000574437 ABCC4O15439 1325 aa18.37■□□□□ 0.53
ABR-228ENST00000574437 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
ABR-228ENST00000574437 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
ABR-228ENST00000574437 NASPP49321 788 aaPredicted RBP18.36■□□□□ 0.53
ABR-228ENST00000574437 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
ABR-228ENST00000574437 MED14O60244 1454 aa18.36■□□□□ 0.53
ABR-228ENST00000574437 SMARCA5O60264 1052 aaPredicted RBP18.36■□□□□ 0.53
ABR-228ENST00000574437 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
ABR-228ENST00000574437 IL13P35225 146 aa18.35■□□□□ 0.53
ABR-228ENST00000574437 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
ABR-228ENST00000574437 RABEP1Q15276 862 aa18.34■□□□□ 0.53
ABR-228ENST00000574437 PTCH1Q13635 1447 aa18.34■□□□□ 0.53
ABR-228ENST00000574437 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
ABR-228ENST00000574437 HSP90AA2PQ14568 343 aaPredicted RBP18.33■□□□□ 0.53
ABR-228ENST00000574437 TTC22Q5TAA0 569 aa18.33■□□□□ 0.53
ABR-228ENST00000574437 ZNF853P0CG23 659 aa18.33■□□□□ 0.52
ABR-228ENST00000574437 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
ABR-228ENST00000574437 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
ABR-228ENST00000574437 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
ABR-228ENST00000574437 PKP1Q13835 747 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms