RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 CRBNQ96SW2 442 aa9.71□□□□□ -0.86
CFDP1-202ENST00000562602 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.86
CFDP1-202ENST00000562602 NKTRP30414 1462 aaKnown RBP9.71□□□□□ -0.86
CFDP1-202ENST00000562602 MYO3AQ8NEV4 1616 aa9.71□□□□□ -0.86
CFDP1-202ENST00000562602 KIF1BO60333 1816 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 KIF13AQ9H1H9 1805 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 ERVK-7P63135 1459 aa9.7□□□□□ -0.86
CFDP1-202ENST00000562602 ADGRB3O60242 1522 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 EVI5O60447 810 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 ZNF454Q8N9F8 522 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 MROH1Q8NDA8 1641 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 KDM2BQ8NHM5 1336 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
CFDP1-202ENST00000562602 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
CFDP1-202ENST00000562602 ADGRF5Q8IZF2 1346 aa9.68□□□□□ -0.86
CFDP1-202ENST00000562602 CCDC27Q2M243 656 aa9.68□□□□□ -0.86
CFDP1-202ENST00000562602 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
CFDP1-202ENST00000562602 KCNK17Q96T54 332 aa9.68□□□□□ -0.86
CFDP1-202ENST00000562602 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CFDP1-202ENST00000562602 NEO1Q92859 1461 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 CD109Q6YHK3 1445 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
CFDP1-202ENST00000562602 FAM161AQ3B820 660 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 MORC1Q86VD1 984 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 BCL2L12Q9HB09 334 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
CFDP1-202ENST00000562602 ARHGAP31Q2M1Z3 1444 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 ZMYM3Q14202 1370 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 IFT172Q9UG01 1749 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 APAF1O14727 1248 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 PLIN1O60240 522 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 SLC52A1Q9NWF4 448 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 MYOM1P52179 1685 aa9.66□□□□□ -0.86
CFDP1-202ENST00000562602 ZFYVE9O95405 1425 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 NOS1P29475 1434 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 MAPK8IP3Q9UPT6 1336 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 USP32Q8NFA0 1604 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
CFDP1-202ENST00000562602 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
CFDP1-202ENST00000562602 PNNQ9H307 717 aaKnown RBP9.65□□□□□ -0.86
CFDP1-202ENST00000562602 VPS9D1Q9Y2B5 631 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 DIP2BQ9P265 1576 aa9.65□□□□□ -0.86
CFDP1-202ENST00000562602 KIDINS220Q9ULH0 1771 aa9.65□□□□□ -0.87
CFDP1-202ENST00000562602 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
CFDP1-202ENST00000562602 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 MYH16Q9H6N6 1097 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 NPATQ14207 1427 aa9.64□□□□□ -0.87
CFDP1-202ENST00000562602 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
CFDP1-202ENST00000562602 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
CFDP1-202ENST00000562602 ADAM33Q9BZ11 813 aa9.63□□□□□ -0.87
CFDP1-202ENST00000562602 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
CFDP1-202ENST00000562602 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
CFDP1-202ENST00000562602 BHMG1C9JSJ3 638 aaPredicted RBP9.62□□□□□ -0.87
CFDP1-202ENST00000562602 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
CFDP1-202ENST00000562602 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
CFDP1-202ENST00000562602 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
CFDP1-202ENST00000562602 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
CFDP1-202ENST00000562602 ADGRB1O14514 1584 aa9.62□□□□□ -0.87
CFDP1-202ENST00000562602 ABCC3O15438 1527 aa9.61□□□□□ -0.87
CFDP1-202ENST00000562602 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
CFDP1-202ENST00000562602 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
CFDP1-202ENST00000562602 NBR1Q14596 966 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 C20orf194Q5TEA3 1177 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 GGT6Q6P531 493 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 TRAK1Q9UPV9 953 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 PPLO60437 1756 aa9.6□□□□□ -0.87
CFDP1-202ENST00000562602 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
CFDP1-202ENST00000562602 TERF2IPQ9NYB0 399 aa9.59□□□□□ -0.87
CFDP1-202ENST00000562602 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
CFDP1-202ENST00000562602 UGGT1Q9NYU2 1555 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 IL16Q14005 1332 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 PTPREP23469 700 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 TCP11L2Q8N4U5 519 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 RWDD1Q9H446 243 aaPredicted RBP9.58□□□□□ -0.88
CFDP1-202ENST00000562602 ABCC11Q96J66 1382 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 MED14O60244 1454 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
CFDP1-202ENST00000562602 NEFMP07197 916 aa9.57□□□□□ -0.88
CFDP1-202ENST00000562602 RARSP54136 660 aaKnown RBP9.57□□□□□ -0.88
CFDP1-202ENST00000562602 BECN1Q14457 450 aa9.57□□□□□ -0.88
CFDP1-202ENST00000562602 SLC12A5Q9H2X9 1139 aa9.57□□□□□ -0.88
CFDP1-202ENST00000562602 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
CFDP1-202ENST00000562602 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
CFDP1-202ENST00000562602 MROH2AA6NES4 1674 aa9.57□□□□□ -0.88
CFDP1-202ENST00000562602 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 QRICH2Q9H0J4 1663 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 IQSEC2Q5JU85 1478 aa9.56□□□□□ -0.88
CFDP1-202ENST00000562602 MTHFSP49914 203 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms