RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 GNAI1P63096 354 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
SPG11-215ENST00000559193 MBIPQ9NS73 344 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 AGLP35573 1532 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 HSCBQ8IWL3 235 aa20.83■□□□□ 0.93
SPG11-215ENST00000559193 C1orf115Q9H7X2 142 aa20.83■□□□□ 0.93
SPG11-215ENST00000559193 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.93
SPG11-215ENST00000559193 NRXN3Q9Y4C0 1643 aa20.83■□□□□ 0.92
SPG11-215ENST00000559193 NCOA3Q9Y6Q9 1424 aa20.83■□□□□ 0.92
SPG11-215ENST00000559193 BMP2KLQ5H9B9 411 aa20.82■□□□□ 0.92
SPG11-215ENST00000559193 ZNF692Q9BU19 519 aaPredicted RBP20.82■□□□□ 0.92
SPG11-215ENST00000559193 AATKQ6ZMQ8 1374 aa20.82■□□□□ 0.92
SPG11-215ENST00000559193 ABCC4O15439 1325 aa20.82■□□□□ 0.92
SPG11-215ENST00000559193 WASLO00401 505 aaPredicted RBP20.82■□□□□ 0.92
SPG11-215ENST00000559193 GCC1Q96CN9 775 aa20.81■□□□□ 0.92
SPG11-215ENST00000559193 CPS1P31327 1500 aa20.8■□□□□ 0.92
SPG11-215ENST00000559193 ELL2O00472 640 aaPredicted RBP20.8■□□□□ 0.92
SPG11-215ENST00000559193 ANKRD45Q5TZF3 282 aa20.8■□□□□ 0.92
SPG11-215ENST00000559193 CHMP4BQ9H444 224 aaKnown RBP20.8■□□□□ 0.92
SPG11-215ENST00000559193 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
SPG11-215ENST00000559193 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
SPG11-215ENST00000559193 L1TD1Q5T7N2 865 aaKnown RBP20.79■□□□□ 0.92
SPG11-215ENST00000559193 METP08581 1390 aa20.79■□□□□ 0.92
SPG11-215ENST00000559193 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
SPG11-215ENST00000559193 DDIT3P35638 169 aa20.78■□□□□ 0.92
SPG11-215ENST00000559193 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
SPG11-215ENST00000559193 SNX21Q969T3 373 aa20.78■□□□□ 0.92
SPG11-215ENST00000559193 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
SPG11-215ENST00000559193 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.92
SPG11-215ENST00000559193 CFAP44Q96MT7 982 aa20.77■□□□□ 0.92
SPG11-215ENST00000559193 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.92
SPG11-215ENST00000559193 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.91
SPG11-215ENST00000559193 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.91
SPG11-215ENST00000559193 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
SPG11-215ENST00000559193 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
SPG11-215ENST00000559193 LMOD3Q0VAK6 560 aa20.76■□□□□ 0.91
SPG11-215ENST00000559193 NUDT16Q96DE0 195 aaKnown RBP20.76■□□□□ 0.91
SPG11-215ENST00000559193 FAM83GA6ND36 823 aa20.75■□□□□ 0.91
SPG11-215ENST00000559193 COG3Q96JB2 828 aa20.75■□□□□ 0.91
SPG11-215ENST00000559193 TXNDC2Q86VQ3 553 aa20.75■□□□□ 0.91
SPG11-215ENST00000559193 KIF2CQ99661 725 aa20.75■□□□□ 0.91
SPG11-215ENST00000559193 C3P01024 1663 aa20.74■□□□□ 0.91
SPG11-215ENST00000559193 FSD2A1L4K1 749 aa20.74■□□□□ 0.91
SPG11-215ENST00000559193 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
SPG11-215ENST00000559193 TRAK2O60296 914 aa20.73■□□□□ 0.91
SPG11-215ENST00000559193 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
SPG11-215ENST00000559193 TBC1D9Q6ZT07 1266 aa20.73■□□□□ 0.91
SPG11-215ENST00000559193 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
SPG11-215ENST00000559193 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
SPG11-215ENST00000559193 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
SPG11-215ENST00000559193 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
SPG11-215ENST00000559193 NRKQ7Z2Y5 1582 aa20.72■□□□□ 0.91
SPG11-215ENST00000559193 CCDC61Q9Y6R9 512 aa20.72■□□□□ 0.91
SPG11-215ENST00000559193 MLECQ14165 292 aa20.71■□□□□ 0.91
SPG11-215ENST00000559193 TECPR2O15040 1411 aa20.71■□□□□ 0.91
SPG11-215ENST00000559193 GOLGA6L3A6NEY3 463 aa20.71■□□□□ 0.91
SPG11-215ENST00000559193 TSPOAP1O95153 1857 aa20.71■□□□□ 0.91
SPG11-215ENST00000559193 ITSN1Q15811 1721 aa20.7■□□□□ 0.9
SPG11-215ENST00000559193 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.9
SPG11-215ENST00000559193 PRKCSHP14314 528 aaPredicted RBP20.7■□□□□ 0.9
SPG11-215ENST00000559193 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.7■□□□□ 0.9
SPG11-215ENST00000559193 KIF24Q5T7B8 1368 aa20.69■□□□□ 0.9
SPG11-215ENST00000559193 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
SPG11-215ENST00000559193 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.69■□□□□ 0.9
SPG11-215ENST00000559193 ARXQ96QS3 562 aa20.69■□□□□ 0.9
SPG11-215ENST00000559193 PRR36Q9H6K5 1346 aa20.69■□□□□ 0.9
SPG11-215ENST00000559193 CD2BP2O95400 341 aaKnown RBP20.69■□□□□ 0.9
SPG11-215ENST00000559193 HSP90AB1P08238 724 aaKnown RBP20.68■□□□□ 0.9
SPG11-215ENST00000559193 AEBP1Q8IUX7 1158 aa20.67■□□□□ 0.9
SPG11-215ENST00000559193 SIRT1Q96EB6 747 aa20.67■□□□□ 0.9
SPG11-215ENST00000559193 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
SPG11-215ENST00000559193 RGS12O14924 1447 aa20.66■□□□□ 0.9
SPG11-215ENST00000559193 GSPT1P15170 499 aaKnown RBP20.66■□□□□ 0.9
SPG11-215ENST00000559193 TNPO1Q92973 898 aaKnown RBP20.66■□□□□ 0.9
SPG11-215ENST00000559193 CDC45O75419 566 aa20.65■□□□□ 0.9
SPG11-215ENST00000559193 EIF4A2Q14240 407 aaKnown RBP20.65■□□□□ 0.9
SPG11-215ENST00000559193 INTS3Q68E01 1043 aaKnown RBP20.65■□□□□ 0.9
SPG11-215ENST00000559193 ATP10DQ9P241 1426 aa20.65■□□□□ 0.9
SPG11-215ENST00000559193 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.9
SPG11-215ENST00000559193 PLEKHM2Q8IWE5 1019 aa20.64■□□□□ 0.9
SPG11-215ENST00000559193 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.9
SPG11-215ENST00000559193 KRT24Q2M2I5 525 aa20.64■□□□□ 0.89
SPG11-215ENST00000559193 PANK2Q9BZ23 570 aa20.64■□□□□ 0.89
SPG11-215ENST00000559193 DCTPP1Q9H773 170 aa20.64■□□□□ 0.89
SPG11-215ENST00000559193 SULT6B1Q6IMI4 303 aa20.63■□□□□ 0.89
SPG11-215ENST00000559193 RRAGDQ9NQL2 400 aaPredicted RBP20.63■□□□□ 0.89
SPG11-215ENST00000559193 K7ELQ4 463 aaPredicted RBP20.63■□□□□ 0.89
SPG11-215ENST00000559193 ROBO2Q9HCK4 1378 aa20.62■□□□□ 0.89
SPG11-215ENST00000559193 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
SPG11-215ENST00000559193 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
SPG11-215ENST00000559193 CHL1O00533 1208 aa20.61■□□□□ 0.89
SPG11-215ENST00000559193 TTC21BQ7Z4L5 1316 aa20.61■□□□□ 0.89
SPG11-215ENST00000559193 ANKRD44Q8N8A2 993 aa20.6■□□□□ 0.89
SPG11-215ENST00000559193 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
SPG11-215ENST00000559193 TTC22Q5TAA0 569 aa20.6■□□□□ 0.89
SPG11-215ENST00000559193 PEAK1Q9H792 1746 aa20.59■□□□□ 0.89
SPG11-215ENST00000559193 MCM10Q7L590 875 aa20.59■□□□□ 0.89
SPG11-215ENST00000559193 GBP4Q96PP9 640 aa20.59■□□□□ 0.89
SPG11-215ENST00000559193 MSH6P52701 1360 aa20.59■□□□□ 0.89
SPG11-215ENST00000559193 TOPAZ1Q8N9V7 1692 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms