RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 KDM4AO75164 1064 aa9.08□□□□□ -0.96
FOXN3-218ENST00000557718 FOXC1Q12948 553 aa9.08□□□□□ -0.96
FOXN3-218ENST00000557718 MSS51Q4VC12 460 aa9.08□□□□□ -0.96
FOXN3-218ENST00000557718 KIDINS220Q9ULH0 1771 aa9.08□□□□□ -0.96
FOXN3-218ENST00000557718 ABCC5O15440 1437 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 DAPK1P53355 1430 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 KDM6BO15054 1643 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
FOXN3-218ENST00000557718 Q3C1V9 767 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 CCDC102AQ96A19 550 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 CFDP1Q9UEE9 299 aaPredicted RBP9.07□□□□□ -0.96
FOXN3-218ENST00000557718 NEO1Q92859 1461 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 KDM5CP41229 1560 aa9.07□□□□□ -0.96
FOXN3-218ENST00000557718 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
FOXN3-218ENST00000557718 FAM69CQ0P6D2 419 aa9.06□□□□□ -0.96
FOXN3-218ENST00000557718 ADGRL1O94910 1474 aa9.06□□□□□ -0.96
FOXN3-218ENST00000557718 SHANK2Q9UPX8 1470 aa9.06□□□□□ -0.96
FOXN3-218ENST00000557718 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 PLXNC1O60486 1568 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 CCDC141Q6ZP82 1450 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
FOXN3-218ENST00000557718 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
FOXN3-218ENST00000557718 ADGRL2O95490 1459 aa9.04□□□□□ -0.96
FOXN3-218ENST00000557718 USP46P62068 366 aa9.04□□□□□ -0.96
FOXN3-218ENST00000557718 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
FOXN3-218ENST00000557718 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-218ENST00000557718 SIGLEC1Q9BZZ2 1709 aa9.04□□□□□ -0.96
FOXN3-218ENST00000557718 ABCA6Q8N139 1617 aa9.04□□□□□ -0.96
FOXN3-218ENST00000557718 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 COL17A1Q9UMD9 1497 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-218ENST00000557718 MMP16P51512 607 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 EFCAB2Q5VUJ9 269 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 HLA-CQ95604 372 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 ZMYM4Q5VZL5 1548 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 POGZQ7Z3K3 1410 aa9.03□□□□□ -0.96
FOXN3-218ENST00000557718 TEX14Q8IWB6 1497 aa9.02□□□□□ -0.96
FOXN3-218ENST00000557718 ATP7AQ04656 1500 aa9.02□□□□□ -0.97
FOXN3-218ENST00000557718 ZBTB24O43167 697 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-218ENST00000557718 CLCN1P35523 988 aa9.02□□□□□ -0.97
FOXN3-218ENST00000557718 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.976e-7■■■■□ 20.3
FOXN3-218ENST00000557718 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
FOXN3-218ENST00000557718 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
FOXN3-218ENST00000557718 C9orf84Q5VXU9 1444 aa9.02□□□□□ -0.97
FOXN3-218ENST00000557718 SCAPERQ9BY12 1400 aa9.02□□□□□ -0.97
FOXN3-218ENST00000557718 HOXA2O43364 376 aa9.01□□□□□ -0.97
FOXN3-218ENST00000557718 FAM217BQ9NTX9 383 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-218ENST00000557718 DIP2CQ9Y2E4 1556 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 NAIPQ13075 1403 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 POTECB2RU33 542 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 ST8SIA5O15466 376 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 DXOO77932 396 aaKnown RBP9□□□□□ -0.97
FOXN3-218ENST00000557718 ITGAEP38570 1179 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 AAASQ9NRG9 546 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 ZNF518AQ6AHZ1 1483 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
FOXN3-218ENST00000557718 HFM1A2PYH4 1435 aa8.99□□□□□ -0.97
FOXN3-218ENST00000557718 NCOA1Q15788 1441 aa8.99□□□□□ -0.97
FOXN3-218ENST00000557718 CYP4X1Q8N118 509 aa8.99□□□□□ -0.97
FOXN3-218ENST00000557718 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
FOXN3-218ENST00000557718 DENND4BO75064 1496 aaPredicted RBP8.99□□□□□ -0.97
FOXN3-218ENST00000557718 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
FOXN3-218ENST00000557718 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
FOXN3-218ENST00000557718 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
FOXN3-218ENST00000557718 DEPDC5O75140 1603 aa8.98□□□□□ -0.97
FOXN3-218ENST00000557718 MLH3Q9UHC1 1453 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 ARHGEF40Q8TER5 1519 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 TRIM32Q13049 653 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 AFAP1Q8N556 730 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 CHIC2Q9UKJ5 165 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 UNC13BO14795 1591 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 MROH1Q8NDA8 1641 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 EIF2AK4Q9P2K8 1649 aaKnown RBP8.97□□□□□ -0.97
FOXN3-218ENST00000557718 RTEL1-TNFRSF6BF6WH68 1400 aa8.97□□□□□ -0.97
FOXN3-218ENST00000557718 WNT7AO00755 349 aa8.96□□□□□ -0.98
FOXN3-218ENST00000557718 AVPP01185 164 aa8.96□□□□□ -0.98
FOXN3-218ENST00000557718 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.98
FOXN3-218ENST00000557718 REPIN1Q9BWE0 567 aaKnown RBP8.96□□□□□ -0.98
FOXN3-218ENST00000557718 RNF17Q9BXT8 1623 aaKnown RBP8.95□□□□□ -0.98
FOXN3-218ENST00000557718 RAPGEF3O95398 923 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 RAB3GAP2Q9H2M9 1393 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 SETD5Q9C0A6 1442 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 YEATS2Q9ULM3 1422 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 DUOX2Q9NRD8 1548 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 REREQ9P2R6 1566 aa8.95□□□□□ -0.98
FOXN3-218ENST00000557718 CEP152O94986 1710 aa8.94□□□□□ -0.98
FOXN3-218ENST00000557718 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
FOXN3-218ENST00000557718 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
FOXN3-218ENST00000557718 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
FOXN3-218ENST00000557718 RRP7BPQ9NSQ0 103 aa8.94□□□□□ -0.98
FOXN3-218ENST00000557718 KIF15Q9NS87 1388 aa8.94□□□□□ -0.98
FOXN3-218ENST00000557718 BARGINQ6ZT62 677 aa8.93□□□□□ -0.98
FOXN3-218ENST00000557718 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
FOXN3-218ENST00000557718 SPAG9O60271 1321 aaKnown RBP8.93□□□□□ -0.98
FOXN3-218ENST00000557718 ANKRD30AQ9BXX3 1397 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms