RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	ATP10D	Q9P241	1426 aa		14.07	□□□□□ -0.16
PABPN1-208	ENST00000557702	COL5A2	P05997	1499 aa	Predicted RBP	14.07	□□□□□ -0.16
PABPN1-208	ENST00000557702	GC	P02774	474 aa		14.07	□□□□□ -0.16
PABPN1-208	ENST00000557702	TOM1L2	Q6ZVM7	507 aa		14.07	□□□□□ -0.16
PABPN1-208	ENST00000557702	CDCA7	Q9BWT1	371 aa	Predicted RBP	14.07	□□□□□ -0.16
PABPN1-208	ENST00000557702	SLC16A10	Q8TF71	515 aa		14.06	□□□□□ -0.16
PABPN1-208	ENST00000557702	NUDT16	Q96DE0	195 aa	Known RBP	14.06	□□□□□ -0.16
PABPN1-208	ENST00000557702	LMO7	Q8WWI1	1683 aa		14.06	□□□□□ -0.16
PABPN1-208	ENST00000557702	NLRP13	Q86W25	1043 aa		14.05	□□□□□ -0.16
PABPN1-208	ENST00000557702	NLGN2	Q8NFZ4	835 aa		14.05	□□□□□ -0.16
PABPN1-208	ENST00000557702	YBX3	P16989	372 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
PABPN1-208	ENST00000557702	USP19	O94966	1318 aa		14.04	□□□□□ -0.16
PABPN1-208	ENST00000557702	LRRC37A3	O60309	1634 aa		14.04	□□□□□ -0.16
PABPN1-208	ENST00000557702	ZBTB7C	A1YPR0	619 aa		14.03	□□□□□ -0.16
PABPN1-208	ENST00000557702	CAPN15	O75808	1086 aa		14.03	□□□□□ -0.16
PABPN1-208	ENST00000557702	APLP1	P51693	650 aa		14.03	□□□□□ -0.16
PABPN1-208	ENST00000557702	ACE	P12821	1306 aa		14.02	□□□□□ -0.17
PABPN1-208	ENST00000557702	EXOC5	O00471	708 aa		14.02	□□□□□ -0.17
PABPN1-208	ENST00000557702	ZNF526	Q8TF50	670 aa	Predicted RBP	14.02	□□□□□ -0.17
PABPN1-208	ENST00000557702	POLR3A	O14802	1390 aa	Predicted RBP	14.01	□□□□□ -0.17
PABPN1-208	ENST00000557702	ZNF827	Q17R98	1081 aa		14.01	□□□□□ -0.17
PABPN1-208	ENST00000557702	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.99	□□□□□ -0.17
PABPN1-208	ENST00000557702	DNAJC5G	Q8N7S2	189 aa		13.99	□□□□□ -0.17
PABPN1-208	ENST00000557702	CCDC61	Q9Y6R9	512 aa		13.99	□□□□□ -0.17
PABPN1-208	ENST00000557702	WDR17	Q8IZU2	1322 aa		13.98	□□□□□ -0.17
PABPN1-208	ENST00000557702	PLEKHG3	A1L390	1219 aa		13.98	□□□□□ -0.17
PABPN1-208	ENST00000557702	PRELP	P51888	382 aa		13.98	□□□□□ -0.17
PABPN1-208	ENST00000557702	ACSBG1	Q96GR2	724 aa		13.98	□□□□□ -0.17
PABPN1-208	ENST00000557702	CDK19	Q9BWU1	502 aa		13.98	□□□□□ -0.17
PABPN1-208	ENST00000557702	AKT1S1	Q96B36	256 aa		13.97	□□□□□ -0.17
PABPN1-208	ENST00000557702	MPHOSPH9	Q99550	1183 aa		13.97	□□□□□ -0.17
PABPN1-208	ENST00000557702	ITSN1	Q15811	1721 aa		13.97	□□□□□ -0.17
PABPN1-208	ENST00000557702	ADCY9	O60503	1353 aa		13.96	□□□□□ -0.17
PABPN1-208	ENST00000557702	AKAP12	Q02952	1782 aa		13.96	□□□□□ -0.17
PABPN1-208	ENST00000557702	CARD10	Q9BWT7	1032 aa		13.96	□□□□□ -0.17
PABPN1-208	ENST00000557702	LRRC4B	Q9NT99	713 aa		13.96	□□□□□ -0.17
PABPN1-208	ENST00000557702	ADGRB1	O14514	1584 aa		13.96	□□□□□ -0.18
PABPN1-208	ENST00000557702	PNPLA7	Q6ZV29	1317 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	PAPPA	Q13219	1627 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	KIF3C	O14782	793 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	CSB-PGBD3	P0DP91	1061 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	TNS4	Q8IZW8	715 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	TFCP2L1	Q9NZI6	479 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	AXIN2	Q9Y2T1	843 aa		13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	BRD4	O60885	1362 aa	Predicted RBP	13.95	□□□□□ -0.18
PABPN1-208	ENST00000557702	NLRP6	P59044	892 aa		13.94	□□□□□ -0.18
PABPN1-208	ENST00000557702	TOPAZ1	Q8N9V7	1692 aa		13.94	□□□□□ -0.18
PABPN1-208	ENST00000557702	USP6	P35125	1406 aa		13.93	□□□□□ -0.18
PABPN1-208	ENST00000557702	SLC27A3	Q5K4L6	730 aa		13.93	□□□□□ -0.18
PABPN1-208	ENST00000557702	KAT6B	Q8WYB5	2073 aa		13.91	□□□□□ -0.18
PABPN1-208	ENST00000557702	TOMM70	O94826	608 aa		13.9	□□□□□ -0.18
PABPN1-208	ENST00000557702	COL24A1	Q17RW2	1714 aa		13.9	□□□□□ -0.18
PABPN1-208	ENST00000557702	TNS2	Q63HR2	1409 aa		13.9	□□□□□ -0.19
PABPN1-208	ENST00000557702	NHS	Q6T4R5	1651 aa		13.89	□□□□□ -0.19
PABPN1-208	ENST00000557702	CCDC7	Q96M83	1385 aa		13.89	□□□□□ -0.19
PABPN1-208	ENST00000557702	SLC34A2	O95436	690 aa		13.89	□□□□□ -0.19
PABPN1-208	ENST00000557702	CD2AP	Q9Y5K6	639 aa		13.89	□□□□□ -0.19
PABPN1-208	ENST00000557702	WNK3	Q9BYP7	1800 aa		13.89	□□□□□ -0.19
PABPN1-208	ENST00000557702	MSH5	O43196	834 aa		13.88	□□□□□ -0.19
PABPN1-208	ENST00000557702	KLRG1	Q96E93	195 aa		13.88	□□□□□ -0.19
PABPN1-208	ENST00000557702	KDM2A	Q9Y2K7	1162 aa		13.88	□□□□□ -0.19
PABPN1-208	ENST00000557702	ARHGEF25	Q86VW2	580 aa		13.87	□□□□□ -0.19
PABPN1-208	ENST00000557702	JMY	Q8N9B5	988 aa		13.87	□□□□□ -0.19
PABPN1-208	ENST00000557702	CPSF1	Q10570	1443 aa	Known RBP	13.86	□□□□□ -0.19
PABPN1-208	ENST00000557702	QSER1	Q2KHR3	1735 aa		13.86	□□□□□ -0.19
PABPN1-208	ENST00000557702	COL18A1	P39060	1754 aa		13.86	□□□□□ -0.19
PABPN1-208	ENST00000557702	SLIT3	O75094	1523 aa		13.85	□□□□□ -0.19
PABPN1-208	ENST00000557702	PPIP5K1	Q6PFW1	1433 aa		13.85	□□□□□ -0.19
PABPN1-208	ENST00000557702	KCNQ4	P56696	695 aa		13.85	□□□□□ -0.19
PABPN1-208	ENST00000557702	KCNH5	Q8NCM2	988 aa		13.85	□□□□□ -0.19
PABPN1-208	ENST00000557702	BTAF1	O14981	1849 aa		13.85	□□□□□ -0.19
PABPN1-208	ENST00000557702	SRPK2	P78362	688 aa	Known RBP	13.84	□□□□□ -0.19
PABPN1-208	ENST00000557702	MSL1	Q68DK7	614 aa		13.84	□□□□□ -0.19
PABPN1-208	ENST00000557702	DCAF11	Q8TEB1	546 aa		13.84	□□□□□ -0.19
PABPN1-208	ENST00000557702	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.84	□□□□□ -0.19
PABPN1-208	ENST00000557702	SOX12	O15370	315 aa		13.83	□□□□□ -0.2
PABPN1-208	ENST00000557702	IL2RB	P14784	551 aa		13.83	□□□□□ -0.2
PABPN1-208	ENST00000557702	COL23A1	Q86Y22	540 aa	Predicted RBP	13.83	□□□□□ -0.2
PABPN1-208	ENST00000557702	STAC3	Q96MF2	364 aa		13.83	□□□□□ -0.2
PABPN1-208	ENST00000557702	ABCC6	O95255	1503 aa		13.82	□□□□□ -0.2
PABPN1-208	ENST00000557702	WWC3	Q9ULE0	1092 aa		13.82	□□□□□ -0.2
PABPN1-208	ENST00000557702	HTRA3	P83110	453 aa		13.81	□□□□□ -0.2
PABPN1-208	ENST00000557702	NLRP2	Q9NX02	1062 aa		13.81	□□□□□ -0.2
PABPN1-208	ENST00000557702	TRPM1	Q7Z4N2	1603 aa		13.8	□□□□□ -0.2
PABPN1-208	ENST00000557702	CABP1	Q9NZU7	370 aa		13.8	□□□□□ -0.2
PABPN1-208	ENST00000557702	IGSF1	Q8N6C5	1336 aa		13.8	□□□□□ -0.2
PABPN1-208	ENST00000557702	PCNT	O95613	3336 aa		13.79	□□□□□ -0.2
PABPN1-208	ENST00000557702	RBM46	Q8TBY0	533 aa	Known RBP	13.79	□□□□□ -0.2
PABPN1-208	ENST00000557702	SYTL4	Q96C24	671 aa	Predicted RBP	13.79	□□□□□ -0.2
PABPN1-208	ENST00000557702	CABP2	Q9NPB3	220 aa		13.79	□□□□□ -0.2
PABPN1-208	ENST00000557702	RGPD5	Q99666	1765 aa		13.78	□□□□□ -0.2
PABPN1-208	ENST00000557702	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPN1-208	ENST00000557702	PCDH10	Q9P2E7	1040 aa		13.78	□□□□□ -0.2
PABPN1-208	ENST00000557702	CCNL1	Q9UK58	526 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPN1-208	ENST00000557702	TUBGCP6	Q96RT7	1819 aa		13.78	□□□□□ -0.2
PABPN1-208	ENST00000557702	DDX54	Q8TDD1	881 aa	Known RBP	13.77	□□□□□ -0.21
PABPN1-208	ENST00000557702	NMRK2	Q9NPI5	230 aa		13.77	□□□□□ -0.21
PABPN1-208	ENST00000557702	WDR90	Q96KV7	1748 aa		13.76	□□□□□ -0.21
PABPN1-208	ENST00000557702	PRIM1	P49642	420 aa	Known RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms