RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 ABTB2Q8N961 1025 aa19.77■□□□□ 0.76
ABCD4-224ENST00000556119 USP19O94966 1318 aa19.76■□□□□ 0.75
ABCD4-224ENST00000556119 BCL9O00512 1426 aa19.76■□□□□ 0.75
ABCD4-224ENST00000556119 ACEP12821 1306 aa19.76■□□□□ 0.75
ABCD4-224ENST00000556119 POLR3AO14802 1390 aaPredicted RBP19.75■□□□□ 0.75
ABCD4-224ENST00000556119 WNK3Q9BYP7 1800 aa19.75■□□□□ 0.75
ABCD4-224ENST00000556119 GCP02774 474 aa19.75■□□□□ 0.75
ABCD4-224ENST00000556119 AATKQ6ZMQ8 1374 aa19.72■□□□□ 0.75
ABCD4-224ENST00000556119 TOPAZ1Q8N9V7 1692 aa19.71■□□□□ 0.75
ABCD4-224ENST00000556119 NLRP13Q86W25 1043 aa19.7■□□□□ 0.74
ABCD4-224ENST00000556119 TOM1L2Q6ZVM7 507 aa19.69■□□□□ 0.74
ABCD4-224ENST00000556119 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
ABCD4-224ENST00000556119 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
ABCD4-224ENST00000556119 ARHGEF28Q8N1W1 1705 aaKnown RBP19.68■□□□□ 0.74
ABCD4-224ENST00000556119 COL18A1P39060 1754 aa19.68■□□□□ 0.74
ABCD4-224ENST00000556119 PLEKHG3A1L390 1219 aa19.68■□□□□ 0.74
ABCD4-224ENST00000556119 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
ABCD4-224ENST00000556119 PAPPAQ13219 1627 aa19.68■□□□□ 0.74
ABCD4-224ENST00000556119 CCDC61Q9Y6R9 512 aa19.67■□□□□ 0.74
ABCD4-224ENST00000556119 COL24A1Q17RW2 1714 aa19.66■□□□□ 0.74
ABCD4-224ENST00000556119 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
ABCD4-224ENST00000556119 CDCA7Q9BWT1 371 aaPredicted RBP19.65■□□□□ 0.74
ABCD4-224ENST00000556119 RGPD5Q99666 1765 aa19.65■□□□□ 0.74
ABCD4-224ENST00000556119 HSPA6P17066 643 aa19.64■□□□□ 0.73
ABCD4-224ENST00000556119 ZNF827Q17R98 1081 aa19.64■□□□□ 0.73
ABCD4-224ENST00000556119 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
ABCD4-224ENST00000556119 NHSQ6T4R5 1651 aa19.63■□□□□ 0.73
ABCD4-224ENST00000556119 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
ABCD4-224ENST00000556119 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
ABCD4-224ENST00000556119 KAT6BQ8WYB5 2073 aa19.63■□□□□ 0.73
ABCD4-224ENST00000556119 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
ABCD4-224ENST00000556119 EXOC5O00471 708 aa19.61■□□□□ 0.73
ABCD4-224ENST00000556119 YBX3P16989 372 aaKnown RBP eCLIP19.61■□□□□ 0.73
ABCD4-224ENST00000556119 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
ABCD4-224ENST00000556119 BTAF1O14981 1849 aa19.6■□□□□ 0.73
ABCD4-224ENST00000556119 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
ABCD4-224ENST00000556119 SLC16A10Q8TF71 515 aa19.59■□□□□ 0.73
ABCD4-224ENST00000556119 LRRC4BQ9NT99 713 aa19.59■□□□□ 0.73
ABCD4-224ENST00000556119 SLIT3O75094 1523 aa19.59■□□□□ 0.73
ABCD4-224ENST00000556119 GRIN3BO60391 1043 aa19.58■□□□□ 0.72
ABCD4-224ENST00000556119 POLD1P28340 1107 aa19.58■□□□□ 0.72
ABCD4-224ENST00000556119 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.72
ABCD4-224ENST00000556119 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
ABCD4-224ENST00000556119 NLRP6P59044 892 aa19.57■□□□□ 0.72
ABCD4-224ENST00000556119 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
ABCD4-224ENST00000556119 GPBP1L1Q9HC44 474 aaPredicted RBP19.56■□□□□ 0.72
ABCD4-224ENST00000556119 DCAF11Q8TEB1 546 aa19.55■□□□□ 0.72
ABCD4-224ENST00000556119 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
ABCD4-224ENST00000556119 PNPLA7Q6ZV29 1317 aa19.53■□□□□ 0.72
ABCD4-224ENST00000556119 USP6P35125 1406 aa19.53■□□□□ 0.72
ABCD4-224ENST00000556119 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
ABCD4-224ENST00000556119 PPIP5K1Q6PFW1 1433 aa19.53■□□□□ 0.72
ABCD4-224ENST00000556119 BRD4O60885 1362 aaPredicted RBP19.53■□□□□ 0.72
ABCD4-224ENST00000556119 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
ABCD4-224ENST00000556119 CPSF1Q10570 1443 aaKnown RBP19.51■□□□□ 0.71
ABCD4-224ENST00000556119 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
ABCD4-224ENST00000556119 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
ABCD4-224ENST00000556119 PIK3C2AO00443 1686 aa19.51■□□□□ 0.71
ABCD4-224ENST00000556119 ZNF526Q8TF50 670 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-224ENST00000556119 ADCY9O60503 1353 aa19.49■□□□□ 0.71
ABCD4-224ENST00000556119 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
ABCD4-224ENST00000556119 PCNTO95613 3336 aa19.48■□□□□ 0.71
ABCD4-224ENST00000556119 ABCC6O95255 1503 aa19.47■□□□□ 0.71
ABCD4-224ENST00000556119 SRPK2P78362 688 aaKnown RBP19.47■□□□□ 0.71
ABCD4-224ENST00000556119 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
ABCD4-224ENST00000556119 CABP2Q9NPB3 220 aa19.47■□□□□ 0.71
ABCD4-224ENST00000556119 DNAJC5GQ8N7S2 189 aa19.46■□□□□ 0.71
ABCD4-224ENST00000556119 TFCP2L1Q9NZI6 479 aa19.46■□□□□ 0.71
ABCD4-224ENST00000556119 SLC27A3Q5K4L6 730 aa19.45■□□□□ 0.7
ABCD4-224ENST00000556119 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
ABCD4-224ENST00000556119 KCNQ4P56696 695 aa19.44■□□□□ 0.7
ABCD4-224ENST00000556119 SOX12O15370 315 aa19.43■□□□□ 0.7
ABCD4-224ENST00000556119 KIF3CO14782 793 aa19.42■□□□□ 0.7
ABCD4-224ENST00000556119 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
ABCD4-224ENST00000556119 APLP1P51693 650 aa19.41■□□□□ 0.7
ABCD4-224ENST00000556119 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
ABCD4-224ENST00000556119 IL2RBP14784 551 aa19.39■□□□□ 0.69
ABCD4-224ENST00000556119 COL13A1Q5TAT6 717 aaPredicted RBP19.39■□□□□ 0.69
ABCD4-224ENST00000556119 NFAT5O94916 1531 aa19.39■□□□□ 0.69
ABCD4-224ENST00000556119 LY75O60449 1722 aa19.39■□□□□ 0.69
ABCD4-224ENST00000556119 CAPN15O75808 1086 aa19.38■□□□□ 0.69
ABCD4-224ENST00000556119 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
ABCD4-224ENST00000556119 COL23A1Q86Y22 540 aaPredicted RBP19.37■□□□□ 0.69
ABCD4-224ENST00000556119 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
ABCD4-224ENST00000556119 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
ABCD4-224ENST00000556119 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
ABCD4-224ENST00000556119 KIAA1210Q9ULL0 1709 aa19.36■□□□□ 0.69
ABCD4-224ENST00000556119 ERBB3P21860 1342 aa19.34■□□□□ 0.69
ABCD4-224ENST00000556119 MSH5O43196 834 aa19.34■□□□□ 0.69
ABCD4-224ENST00000556119 NBPF1Q3BBV0 1214 aa19.34■□□□□ 0.69
ABCD4-224ENST00000556119 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.69
ABCD4-224ENST00000556119 DDX54Q8TDD1 881 aaKnown RBP19.31■□□□□ 0.68
ABCD4-224ENST00000556119 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
ABCD4-224ENST00000556119 LTN1O94822 1766 aa19.3■□□□□ 0.68
ABCD4-224ENST00000556119 TOMM70O94826 608 aa19.3■□□□□ 0.68
ABCD4-224ENST00000556119 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
ABCD4-224ENST00000556119 PRELPP51888 382 aa19.3■□□□□ 0.68
ABCD4-224ENST00000556119 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
ABCD4-224ENST00000556119 SYTL4Q96C24 671 aaPredicted RBP19.29■□□□□ 0.68
ABCD4-224ENST00000556119 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms