RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
SNRPF-205ENST00000553192 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
SNRPF-205ENST00000553192 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
SNRPF-205ENST00000553192 GCP02774 474 aa17.66■□□□□ 0.42
SNRPF-205ENST00000553192 ATP10DQ9P241 1426 aa17.65■□□□□ 0.42
SNRPF-205ENST00000553192 ABTB2Q8N961 1025 aa17.65■□□□□ 0.42
SNRPF-205ENST00000553192 NLGN2Q8NFZ4 835 aa17.65■□□□□ 0.42
SNRPF-205ENST00000553192 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
SNRPF-205ENST00000553192 YBX3P16989 372 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNRPF-205ENST00000553192 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
SNRPF-205ENST00000553192 ACEP12821 1306 aa17.64■□□□□ 0.41
SNRPF-205ENST00000553192 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
SNRPF-205ENST00000553192 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
SNRPF-205ENST00000553192 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
SNRPF-205ENST00000553192 ITSN1Q15811 1721 aa17.59■□□□□ 0.41
SNRPF-205ENST00000553192 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
SNRPF-205ENST00000553192 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
SNRPF-205ENST00000553192 GPBP1L1Q9HC44 474 aaPredicted RBP17.59■□□□□ 0.41
SNRPF-205ENST00000553192 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
SNRPF-205ENST00000553192 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
SNRPF-205ENST00000553192 CDCA7Q9BWT1 371 aaPredicted RBP17.58■□□□□ 0.4
SNRPF-205ENST00000553192 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.4
SNRPF-205ENST00000553192 WDR17Q8IZU2 1322 aa17.57■□□□□ 0.4
SNRPF-205ENST00000553192 ZBTB7CA1YPR0 619 aa17.57■□□□□ 0.4
SNRPF-205ENST00000553192 CDK19Q9BWU1 502 aa17.57■□□□□ 0.4
SNRPF-205ENST00000553192 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
SNRPF-205ENST00000553192 WNK3Q9BYP7 1800 aa17.56■□□□□ 0.4
SNRPF-205ENST00000553192 ADCY9O60503 1353 aa17.56■□□□□ 0.4
SNRPF-205ENST00000553192 COL24A1Q17RW2 1714 aa17.56■□□□□ 0.4
SNRPF-205ENST00000553192 SLC16A10Q8TF71 515 aa17.56■□□□□ 0.4
SNRPF-205ENST00000553192 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
SNRPF-205ENST00000553192 TOPAZ1Q8N9V7 1692 aa17.55■□□□□ 0.4
SNRPF-205ENST00000553192 POLD1P28340 1107 aa17.55■□□□□ 0.4
SNRPF-205ENST00000553192 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
SNRPF-205ENST00000553192 COL18A1P39060 1754 aa17.54■□□□□ 0.4
SNRPF-205ENST00000553192 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
SNRPF-205ENST00000553192 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
SNRPF-205ENST00000553192 PNPLA7Q6ZV29 1317 aa17.53■□□□□ 0.4
SNRPF-205ENST00000553192 EXOC5O00471 708 aa17.53■□□□□ 0.4
SNRPF-205ENST00000553192 ZNF526Q8TF50 670 aaPredicted RBP17.53■□□□□ 0.4
SNRPF-205ENST00000553192 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
SNRPF-205ENST00000553192 SLIT3O75094 1523 aa17.52■□□□□ 0.39
SNRPF-205ENST00000553192 NHSQ6T4R5 1651 aa17.52■□□□□ 0.39
SNRPF-205ENST00000553192 COL13A1Q5TAT6 717 aaPredicted RBP17.51■□□□□ 0.39
SNRPF-205ENST00000553192 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
SNRPF-205ENST00000553192 KIF3CO14782 793 aa17.5■□□□□ 0.39
SNRPF-205ENST00000553192 USP6P35125 1406 aa17.49■□□□□ 0.39
SNRPF-205ENST00000553192 TNS2Q63HR2 1409 aa17.49■□□□□ 0.39
SNRPF-205ENST00000553192 CAPN15O75808 1086 aa17.49■□□□□ 0.39
SNRPF-205ENST00000553192 BRD4O60885 1362 aaPredicted RBP17.49■□□□□ 0.39
SNRPF-205ENST00000553192 NLRP6P59044 892 aa17.48■□□□□ 0.39
SNRPF-205ENST00000553192 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
SNRPF-205ENST00000553192 APLP1P51693 650 aa17.46■□□□□ 0.39
SNRPF-205ENST00000553192 ARHGEF25Q86VW2 580 aa17.46■□□□□ 0.39
SNRPF-205ENST00000553192 QSER1Q2KHR3 1735 aa17.45■□□□□ 0.38
SNRPF-205ENST00000553192 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
SNRPF-205ENST00000553192 KDM2AQ9Y2K7 1162 aa17.44■□□□□ 0.38
SNRPF-205ENST00000553192 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
SNRPF-205ENST00000553192 BTAF1O14981 1849 aa17.44■□□□□ 0.38
SNRPF-205ENST00000553192 CCDC7Q96M83 1385 aa17.43■□□□□ 0.38
SNRPF-205ENST00000553192 KCNQ4P56696 695 aa17.43■□□□□ 0.38
SNRPF-205ENST00000553192 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
SNRPF-205ENST00000553192 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
SNRPF-205ENST00000553192 ABCC6O95255 1503 aa17.42■□□□□ 0.38
SNRPF-205ENST00000553192 PRELPP51888 382 aa17.42■□□□□ 0.38
SNRPF-205ENST00000553192 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
SNRPF-205ENST00000553192 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
SNRPF-205ENST00000553192 DCAF11Q8TEB1 546 aa17.4■□□□□ 0.38
SNRPF-205ENST00000553192 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SNRPF-205ENST00000553192 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
SNRPF-205ENST00000553192 PIK3C2AO00443 1686 aa17.38■□□□□ 0.37
SNRPF-205ENST00000553192 TNS4Q8IZW8 715 aa17.37■□□□□ 0.37
SNRPF-205ENST00000553192 CABP2Q9NPB3 220 aa17.37■□□□□ 0.37
SNRPF-205ENST00000553192 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
SNRPF-205ENST00000553192 MSL1Q68DK7 614 aa17.36■□□□□ 0.37
SNRPF-205ENST00000553192 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
SNRPF-205ENST00000553192 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
SNRPF-205ENST00000553192 SOX12O15370 315 aa17.35■□□□□ 0.37
SNRPF-205ENST00000553192 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
SNRPF-205ENST00000553192 TOMM70O94826 608 aa17.34■□□□□ 0.37
SNRPF-205ENST00000553192 SLC34A2O95436 690 aa17.34■□□□□ 0.37
SNRPF-205ENST00000553192 IL2RBP14784 551 aa17.34■□□□□ 0.37
SNRPF-205ENST00000553192 HTRA3P83110 453 aa17.34■□□□□ 0.37
SNRPF-205ENST00000553192 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
SNRPF-205ENST00000553192 KLRG1Q96E93 195 aa17.33■□□□□ 0.36
SNRPF-205ENST00000553192 NFAT5O94916 1531 aa17.32■□□□□ 0.36
SNRPF-205ENST00000553192 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
SNRPF-205ENST00000553192 MSH5O43196 834 aa17.31■□□□□ 0.36
SNRPF-205ENST00000553192 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
SNRPF-205ENST00000553192 NSD2O96028 1365 aa17.3■□□□□ 0.36
SNRPF-205ENST00000553192 ERBB3P21860 1342 aa17.3■□□□□ 0.36
SNRPF-205ENST00000553192 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
SNRPF-205ENST00000553192 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
SNRPF-205ENST00000553192 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
SNRPF-205ENST00000553192 WDR90Q96KV7 1748 aa17.28■□□□□ 0.36
SNRPF-205ENST00000553192 PRIM1P49642 420 aaKnown RBP17.27■□□□□ 0.36
SNRPF-205ENST00000553192 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.36
SNRPF-205ENST00000553192 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
SNRPF-205ENST00000553192 LY75O60449 1722 aa17.26■□□□□ 0.35
SNRPF-205ENST00000553192 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms