RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
TDRD3-208ENST00000535286 TRPM3Q9HCF6 1732 aaPredicted RBP13.57□□□□□ -0.24
TDRD3-208ENST00000535286 KRT28Q7Z3Y7 464 aa13.57□□□□□ -0.24
TDRD3-208ENST00000535286 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
TDRD3-208ENST00000535286 IL16Q14005 1332 aa13.57□□□□□ -0.24
TDRD3-208ENST00000535286 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 SOX12O15370 315 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 RIPK4P57078 832 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
TDRD3-208ENST00000535286 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
TDRD3-208ENST00000535286 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
TDRD3-208ENST00000535286 NFE2L2Q16236 605 aa13.55□□□□□ -0.24
TDRD3-208ENST00000535286 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
TDRD3-208ENST00000535286 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
TDRD3-208ENST00000535286 HMOX1P09601 288 aa13.55□□□□□ -0.24
TDRD3-208ENST00000535286 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
TDRD3-208ENST00000535286 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.55□□□□□ -0.24
TDRD3-208ENST00000535286 SLIT3O75094 1523 aa13.55□□□□□ -0.24
TDRD3-208ENST00000535286 NFAT5O94916 1531 aa13.54□□□□□ -0.24
TDRD3-208ENST00000535286 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
TDRD3-208ENST00000535286 LTN1O94822 1766 aa13.54□□□□□ -0.24
TDRD3-208ENST00000535286 HOXC9P31274 260 aa13.53□□□□□ -0.24
TDRD3-208ENST00000535286 PPP4R2Q9NY27 417 aa13.53□□□□□ -0.24
TDRD3-208ENST00000535286 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
TDRD3-208ENST00000535286 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
TDRD3-208ENST00000535286 USP19O94966 1318 aa13.53□□□□□ -0.24
TDRD3-208ENST00000535286 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.24
TDRD3-208ENST00000535286 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.24
TDRD3-208ENST00000535286 IP6K1Q92551 441 aa13.52□□□□□ -0.24
TDRD3-208ENST00000535286 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.24
TDRD3-208ENST00000535286 IRX6P78412 446 aaPredicted RBP13.52□□□□□ -0.25
TDRD3-208ENST00000535286 KDRP35968 1356 aa13.51□□□□□ -0.25
TDRD3-208ENST00000535286 IGSF1Q8N6C5 1336 aa13.51□□□□□ -0.25
TDRD3-208ENST00000535286 GCP02774 474 aa13.5□□□□□ -0.25
TDRD3-208ENST00000535286 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
TDRD3-208ENST00000535286 PHACTR3Q96KR7 559 aa13.5□□□□□ -0.25
TDRD3-208ENST00000535286 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
TDRD3-208ENST00000535286 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
TDRD3-208ENST00000535286 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
TDRD3-208ENST00000535286 PXDNQ92626 1479 aa13.48□□□□□ -0.25
TDRD3-208ENST00000535286 DLG5Q8TDM6 1919 aa13.48□□□□□ -0.25
TDRD3-208ENST00000535286 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
TDRD3-208ENST00000535286 EYA1Q99502 592 aa13.48□□□□□ -0.25
TDRD3-208ENST00000535286 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
TDRD3-208ENST00000535286 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
TDRD3-208ENST00000535286 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
TDRD3-208ENST00000535286 GNAI1P63096 354 aa13.46□□□□□ -0.25
TDRD3-208ENST00000535286 GAS2L2Q8NHY3 880 aa13.46□□□□□ -0.25
TDRD3-208ENST00000535286 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
TDRD3-208ENST00000535286 ABCC6O95255 1503 aa13.46□□□□□ -0.25
TDRD3-208ENST00000535286 IFT57Q9NWB7 429 aa13.46□□□□□ -0.26
TDRD3-208ENST00000535286 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
TDRD3-208ENST00000535286 ZNF428Q96B54 188 aa13.44□□□□□ -0.26
TDRD3-208ENST00000535286 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
TDRD3-208ENST00000535286 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
TDRD3-208ENST00000535286 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
TDRD3-208ENST00000535286 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
TDRD3-208ENST00000535286 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
TDRD3-208ENST00000535286 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
TDRD3-208ENST00000535286 ZBTB7CA1YPR0 619 aa13.42□□□□□ -0.26
TDRD3-208ENST00000535286 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
TDRD3-208ENST00000535286 PDE3AQ14432 1141 aa13.41□□□□□ -0.26
TDRD3-208ENST00000535286 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
TDRD3-208ENST00000535286 TSR2Q969E8 191 aaKnown RBP13.41□□□□□ -0.26
TDRD3-208ENST00000535286 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
TDRD3-208ENST00000535286 CRYBG1Q9Y4K1 1723 aa13.41□□□□□ -0.26
TDRD3-208ENST00000535286 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
TDRD3-208ENST00000535286 EXOSC9Q06265 439 aaKnown RBP13.41□□□□□ -0.26
TDRD3-208ENST00000535286 CPDO75976 1380 aa13.41□□□□□ -0.26
TDRD3-208ENST00000535286 PLIN1O60240 522 aa13.4□□□□□ -0.26
TDRD3-208ENST00000535286 MS4A1P11836 297 aa13.4□□□□□ -0.26
TDRD3-208ENST00000535286 CANXP27824 592 aaKnown RBP13.4□□□□□ -0.26
TDRD3-208ENST00000535286 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
TDRD3-208ENST00000535286 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
TDRD3-208ENST00000535286 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
TDRD3-208ENST00000535286 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
TDRD3-208ENST00000535286 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.27
TDRD3-208ENST00000535286 BCAR3O75815 825 aa13.39□□□□□ -0.27
TDRD3-208ENST00000535286 LAS1LQ9Y4W2 734 aaKnown RBP13.39□□□□□ -0.27
TDRD3-208ENST00000535286 FAM208AQ9UK61 1670 aaKnown RBP13.39□□□□□ -0.27
TDRD3-208ENST00000535286 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
TDRD3-208ENST00000535286 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
TDRD3-208ENST00000535286 ZC3H6P61129 1189 aaKnown RBP13.38□□□□□ -0.27
TDRD3-208ENST00000535286 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 AMOTQ4VCS5 1084 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 LTBP4Q8N2S1 1624 aa13.38□□□□□ -0.27
TDRD3-208ENST00000535286 AAMPQ13685 434 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
TDRD3-208ENST00000535286 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 COL18A1P39060 1754 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 ERBB3P21860 1342 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
TDRD3-208ENST00000535286 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms