RNA–Protein interactions for RNA: ENST00000535286.5

TDRD3-208, Transcript of tudor domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDRD3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-208ENST00000535286 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
TDRD3-208ENST00000535286 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
TDRD3-208ENST00000535286 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
TDRD3-208ENST00000535286 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
TDRD3-208ENST00000535286 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
TDRD3-208ENST00000535286 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
TDRD3-208ENST00000535286 ABCC9O60706 1549 aa19.24■□□□□ 0.67
TDRD3-208ENST00000535286 NACADO15069 1562 aa19.09■□□□□ 0.65
TDRD3-208ENST00000535286 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.64
TDRD3-208ENST00000535286 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
TDRD3-208ENST00000535286 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
TDRD3-208ENST00000535286 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
TDRD3-208ENST00000535286 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
TDRD3-208ENST00000535286 BICRAQ9NZM4 1560 aa18.25■□□□□ 0.51
TDRD3-208ENST00000535286 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
TDRD3-208ENST00000535286 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
TDRD3-208ENST00000535286 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
TDRD3-208ENST00000535286 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
TDRD3-208ENST00000535286 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
TDRD3-208ENST00000535286 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
TDRD3-208ENST00000535286 WIZO95785 1651 aa17.93■□□□□ 0.46
TDRD3-208ENST00000535286 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
TDRD3-208ENST00000535286 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
TDRD3-208ENST00000535286 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
TDRD3-208ENST00000535286 EIF4G1Q04637 1599 aaKnown RBP17.73■□□□□ 0.43
TDRD3-208ENST00000535286 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
TDRD3-208ENST00000535286 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
TDRD3-208ENST00000535286 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
TDRD3-208ENST00000535286 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
TDRD3-208ENST00000535286 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
TDRD3-208ENST00000535286 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.4
TDRD3-208ENST00000535286 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
TDRD3-208ENST00000535286 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
TDRD3-208ENST00000535286 CFTRP13569 1480 aa17.19■□□□□ 0.34
TDRD3-208ENST00000535286 ABCC8Q09428 1581 aa17.17■□□□□ 0.34
TDRD3-208ENST00000535286 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
TDRD3-208ENST00000535286 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
TDRD3-208ENST00000535286 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
TDRD3-208ENST00000535286 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
TDRD3-208ENST00000535286 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
TDRD3-208ENST00000535286 TOP2BQ02880 1626 aa17■□□□□ 0.31
TDRD3-208ENST00000535286 BIVM-ERCC5R4GMW8 1640 aa16.99■□□□□ 0.31
TDRD3-208ENST00000535286 EEA1Q15075 1411 aa16.99■□□□□ 0.31
TDRD3-208ENST00000535286 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
TDRD3-208ENST00000535286 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
TDRD3-208ENST00000535286 CUX1P39880 1505 aa16.91■□□□□ 0.3
TDRD3-208ENST00000535286 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
TDRD3-208ENST00000535286 NESP48681 1621 aa16.88■□□□□ 0.29
TDRD3-208ENST00000535286 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
TDRD3-208ENST00000535286 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
TDRD3-208ENST00000535286 SOGA1O94964 1423 aa16.86■□□□□ 0.29
TDRD3-208ENST00000535286 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.29
TDRD3-208ENST00000535286 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
TDRD3-208ENST00000535286 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
TDRD3-208ENST00000535286 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.27
TDRD3-208ENST00000535286 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
TDRD3-208ENST00000535286 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
TDRD3-208ENST00000535286 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
TDRD3-208ENST00000535286 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
TDRD3-208ENST00000535286 KIF21BO75037 1637 aa16.71■□□□□ 0.27
TDRD3-208ENST00000535286 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
TDRD3-208ENST00000535286 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
TDRD3-208ENST00000535286 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
TDRD3-208ENST00000535286 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
TDRD3-208ENST00000535286 CUX2O14529 1486 aa16.63■□□□□ 0.25
TDRD3-208ENST00000535286 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
TDRD3-208ENST00000535286 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
TDRD3-208ENST00000535286 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
TDRD3-208ENST00000535286 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
TDRD3-208ENST00000535286 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
TDRD3-208ENST00000535286 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.25
TDRD3-208ENST00000535286 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
TDRD3-208ENST00000535286 RAD54L2Q9Y4B4 1467 aa16.55■□□□□ 0.24
TDRD3-208ENST00000535286 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
TDRD3-208ENST00000535286 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
TDRD3-208ENST00000535286 WDR62O43379 1518 aa16.53■□□□□ 0.24
TDRD3-208ENST00000535286 IGF1RP08069 1367 aa16.53■□□□□ 0.24
TDRD3-208ENST00000535286 CEP162Q5TB80 1403 aa16.52■□□□□ 0.23
TDRD3-208ENST00000535286 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
TDRD3-208ENST00000535286 CUL7Q14999 1698 aa16.47■□□□□ 0.23
TDRD3-208ENST00000535286 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
TDRD3-208ENST00000535286 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
TDRD3-208ENST00000535286 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
TDRD3-208ENST00000535286 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
TDRD3-208ENST00000535286 GAPVD1Q14C86 1478 aa16.44■□□□□ 0.22
TDRD3-208ENST00000535286 CLIP1P30622 1438 aa16.4■□□□□ 0.22
TDRD3-208ENST00000535286 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
TDRD3-208ENST00000535286 PBRM1Q86U86 1689 aa16.35■□□□□ 0.21
TDRD3-208ENST00000535286 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
TDRD3-208ENST00000535286 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
TDRD3-208ENST00000535286 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
TDRD3-208ENST00000535286 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.2
TDRD3-208ENST00000535286 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.19
TDRD3-208ENST00000535286 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
TDRD3-208ENST00000535286 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
TDRD3-208ENST00000535286 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
TDRD3-208ENST00000535286 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
TDRD3-208ENST00000535286 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
TDRD3-208ENST00000535286 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
TDRD3-208ENST00000535286 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms