RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 IGHDP01880 384 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 KCNA6P17658 529 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 SLKQ9H2G2 1235 aaPredicted RBP12.37□□□□□ -0.43
USP35-201ENST00000526425 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 C1orf115Q9H7X2 142 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 PRDM4Q9UKN5 801 aa12.37□□□□□ -0.43
USP35-201ENST00000526425 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
USP35-201ENST00000526425 NKTRP30414 1462 aaKnown RBP12.36□□□□□ -0.43
USP35-201ENST00000526425 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
USP35-201ENST00000526425 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
USP35-201ENST00000526425 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 QRICH2Q9H0J4 1663 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 RLBP1P12271 317 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 SIRT1Q96EB6 747 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
USP35-201ENST00000526425 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
USP35-201ENST00000526425 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
USP35-201ENST00000526425 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 PTPRMP28827 1452 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 IFT172Q9UG01 1749 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 FAM83GA6ND36 823 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 MS4A1P11836 297 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
USP35-201ENST00000526425 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
USP35-201ENST00000526425 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
USP35-201ENST00000526425 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 ACEP12821 1306 aa12.34□□□□□ -0.43
USP35-201ENST00000526425 NGEFQ8N5V2 710 aa12.33□□□□□ -0.43
USP35-201ENST00000526425 MYO5BQ9ULV0 1848 aa12.33□□□□□ -0.44
USP35-201ENST00000526425 TULP4Q9NRJ4 1543 aa12.33□□□□□ -0.44
USP35-201ENST00000526425 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
USP35-201ENST00000526425 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
USP35-201ENST00000526425 NLRP6P59044 892 aa12.33□□□□□ -0.44
USP35-201ENST00000526425 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
USP35-201ENST00000526425 POLR3AO14802 1390 aaPredicted RBP12.33□□□□□ -0.44
USP35-201ENST00000526425 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 ESCO1Q5FWF5 840 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
USP35-201ENST00000526425 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
USP35-201ENST00000526425 PSME1Q06323 249 aa12.31□□□□□ -0.44
USP35-201ENST00000526425 POLKQ9UBT6 870 aa12.31□□□□□ -0.44
USP35-201ENST00000526425 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
USP35-201ENST00000526425 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
USP35-201ENST00000526425 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
USP35-201ENST00000526425 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
USP35-201ENST00000526425 MCM10Q7L590 875 aa12.3□□□□□ -0.44
USP35-201ENST00000526425 ZNF830Q96NB3 372 aaPredicted RBP12.3□□□□□ -0.44
USP35-201ENST00000526425 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
USP35-201ENST00000526425 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
USP35-201ENST00000526425 GOLGA6L3A6NEY3 463 aa12.29□□□□□ -0.44
USP35-201ENST00000526425 ADAMTS13Q76LX8 1427 aa12.29□□□□□ -0.44
USP35-201ENST00000526425 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
USP35-201ENST00000526425 ZNF428Q96B54 188 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 TTC21BQ7Z4L5 1316 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 ZNF521Q96K83 1311 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 HSPA2P54652 639 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 FCHSD2O94868 740 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 TRIM27P14373 513 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 MVPQ14764 893 aaKnown RBP12.28□□□□□ -0.44
USP35-201ENST00000526425 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 ATF7IPQ6VMQ6 1270 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 SECISBP2LQ93073 1101 aaKnown RBP12.28□□□□□ -0.44
USP35-201ENST00000526425 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
USP35-201ENST00000526425 ZBTB22O15209 634 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 IGSF3O75054 1194 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 ATF3P18847 181 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.44
USP35-201ENST00000526425 BECN1Q14457 450 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 DDX19BQ9UMR2 479 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 FER1L4A9Z1Z3 1794 aa12.27□□□□□ -0.44
USP35-201ENST00000526425 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.45
USP35-201ENST00000526425 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
USP35-201ENST00000526425 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.45
USP35-201ENST00000526425 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
USP35-201ENST00000526425 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.45
USP35-201ENST00000526425 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 GNAI1P63096 354 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
USP35-201ENST00000526425 CLCN1P35523 988 aa12.25□□□□□ -0.45
USP35-201ENST00000526425 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
USP35-201ENST00000526425 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
USP35-201ENST00000526425 TRIM35Q9UPQ4 493 aa12.25□□□□□ -0.45
USP35-201ENST00000526425 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
USP35-201ENST00000526425 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
USP35-201ENST00000526425 APPP05067 770 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 INSRP06213 1382 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 ATP7BP35670 1465 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
USP35-201ENST00000526425 ESPNB1AK53 854 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 FOXO3O43524 673 aa12.24□□□□□ -0.45
USP35-201ENST00000526425 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms