RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	PLEKHG3	A1L390	1219 aa		15.89	■□□□□ 0.13
SORBS3-222	ENST00000524057	NLRP13	Q86W25	1043 aa		15.89	■□□□□ 0.13
SORBS3-222	ENST00000524057	CCDC61	Q9Y6R9	512 aa		15.88	■□□□□ 0.13
SORBS3-222	ENST00000524057	TOM1L2	Q6ZVM7	507 aa		15.87	■□□□□ 0.13
SORBS3-222	ENST00000524057	MAP3K5	Q99683	1374 aa		15.87	■□□□□ 0.13
SORBS3-222	ENST00000524057	BCL9	O00512	1426 aa		15.86	■□□□□ 0.13
SORBS3-222	ENST00000524057	ZBTB7C	A1YPR0	619 aa		15.86	■□□□□ 0.13
SORBS3-222	ENST00000524057	KDM2A	Q9Y2K7	1162 aa		15.86	■□□□□ 0.13
SORBS3-222	ENST00000524057	RAB3GAP2	Q9H2M9	1393 aa		15.85	■□□□□ 0.13
SORBS3-222	ENST00000524057	AXIN2	Q9Y2T1	843 aa		15.84	■□□□□ 0.13
SORBS3-222	ENST00000524057	LRRC37A3	O60309	1634 aa		15.83	■□□□□ 0.13
SORBS3-222	ENST00000524057	CDCA7	Q9BWT1	371 aa	Predicted RBP	15.83	■□□□□ 0.12
SORBS3-222	ENST00000524057	AATK	Q6ZMQ8	1374 aa		15.83	■□□□□ 0.12
SORBS3-222	ENST00000524057	ITSN1	Q15811	1721 aa		15.82	■□□□□ 0.12
SORBS3-222	ENST00000524057	GOLGB1	Q14789	3259 aa	Known RBP	15.82	■□□□□ 0.12
SORBS3-222	ENST00000524057	DCAF11	Q8TEB1	546 aa		15.82	■□□□□ 0.12
SORBS3-222	ENST00000524057	EXOC5	O00471	708 aa		15.81	■□□□□ 0.12
SORBS3-222	ENST00000524057	PELP1	Q8IZL8	1130 aa	Known RBP	15.81	■□□□□ 0.12
SORBS3-222	ENST00000524057	WDR17	Q8IZU2	1322 aa		15.8	■□□□□ 0.12
SORBS3-222	ENST00000524057	NLRP6	P59044	892 aa		15.8	■□□□□ 0.12
SORBS3-222	ENST00000524057	KLHL34	Q8N239	644 aa		15.8	■□□□□ 0.12
SORBS3-222	ENST00000524057	ZNF827	Q17R98	1081 aa		15.78	■□□□□ 0.12
SORBS3-222	ENST00000524057	SHANK3	Q9BYB0	1731 aa		15.77	■□□□□ 0.12
SORBS3-222	ENST00000524057	ACSBG1	Q96GR2	724 aa		15.77	■□□□□ 0.12
SORBS3-222	ENST00000524057	CARD10	Q9BWT7	1032 aa		15.77	■□□□□ 0.12
SORBS3-222	ENST00000524057	NLGN2	Q8NFZ4	835 aa		15.76	■□□□□ 0.11
SORBS3-222	ENST00000524057	SLC16A10	Q8TF71	515 aa		15.76	■□□□□ 0.11
SORBS3-222	ENST00000524057	LRRC4B	Q9NT99	713 aa		15.76	■□□□□ 0.11
SORBS3-222	ENST00000524057	STAC3	Q96MF2	364 aa		15.75	■□□□□ 0.11
SORBS3-222	ENST00000524057	TOPAZ1	Q8N9V7	1692 aa		15.75	■□□□□ 0.11
SORBS3-222	ENST00000524057	GRIN3B	O60391	1043 aa		15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	YBX3	P16989	372 aa	Known RBP eCLIP	15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	HSPA6	P17066	643 aa		15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	POLD1	P28340	1107 aa		15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	ARHGEF25	Q86VW2	580 aa		15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	COL18A1	P39060	1754 aa		15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	ARHGEF28	Q8N1W1	1705 aa	Known RBP	15.74	■□□□□ 0.11
SORBS3-222	ENST00000524057	CSB-PGBD3	P0DP91	1061 aa		15.73	■□□□□ 0.11
SORBS3-222	ENST00000524057	AKT1S1	Q96B36	256 aa		15.73	■□□□□ 0.11
SORBS3-222	ENST00000524057	PPIP5K1	Q6PFW1	1433 aa		15.73	■□□□□ 0.11
SORBS3-222	ENST00000524057	BRD4	O60885	1362 aa	Predicted RBP	15.73	■□□□□ 0.11
SORBS3-222	ENST00000524057	AKAP12	Q02952	1782 aa		15.72	■□□□□ 0.11
SORBS3-222	ENST00000524057	SRPK2	P78362	688 aa	Known RBP	15.72	■□□□□ 0.11
SORBS3-222	ENST00000524057	CABP2	Q9NPB3	220 aa		15.72	■□□□□ 0.11
SORBS3-222	ENST00000524057	CABP1	Q9NZU7	370 aa		15.72	■□□□□ 0.11
SORBS3-222	ENST00000524057	SLIT3	O75094	1523 aa		15.71	■□□□□ 0.11
SORBS3-222	ENST00000524057	PAPPA	Q13219	1627 aa		15.71	■□□□□ 0.11
SORBS3-222	ENST00000524057	ATP10D	Q9P241	1426 aa		15.7	■□□□□ 0.1
SORBS3-222	ENST00000524057	GPBP1L1	Q9HC44	474 aa	Predicted RBP	15.7	■□□□□ 0.1
SORBS3-222	ENST00000524057	PNPLA7	Q6ZV29	1317 aa		15.69	■□□□□ 0.1
SORBS3-222	ENST00000524057	USP6	P35125	1406 aa		15.69	■□□□□ 0.1
SORBS3-222	ENST00000524057	WNK3	Q9BYP7	1800 aa		15.69	■□□□□ 0.1
SORBS3-222	ENST00000524057	CPSF1	Q10570	1443 aa	Known RBP	15.68	■□□□□ 0.1
SORBS3-222	ENST00000524057	CCDC7	Q96M83	1385 aa		15.67	■□□□□ 0.1
SORBS3-222	ENST00000524057	SOX12	O15370	315 aa		15.67	■□□□□ 0.1
SORBS3-222	ENST00000524057	KCNH5	Q8NCM2	988 aa		15.67	■□□□□ 0.1
SORBS3-222	ENST00000524057	NHS	Q6T4R5	1651 aa		15.67	■□□□□ 0.1
SORBS3-222	ENST00000524057	TFCP2L1	Q9NZI6	479 aa		15.66	■□□□□ 0.1
SORBS3-222	ENST00000524057	TNS2	Q63HR2	1409 aa		15.66	■□□□□ 0.1
SORBS3-222	ENST00000524057	KCNQ4	P56696	695 aa		15.65	■□□□□ 0.1
SORBS3-222	ENST00000524057	SLC27A3	Q5K4L6	730 aa		15.65	■□□□□ 0.1
SORBS3-222	ENST00000524057	ZNF526	Q8TF50	670 aa	Predicted RBP	15.65	■□□□□ 0.1
SORBS3-222	ENST00000524057	COL24A1	Q17RW2	1714 aa		15.65	■□□□□ 0.1
SORBS3-222	ENST00000524057	RGPD5	Q99666	1765 aa		15.64	■□□□□ 0.1
SORBS3-222	ENST00000524057	NBPF1	Q3BBV0	1214 aa		15.64	■□□□□ 0.09
SORBS3-222	ENST00000524057	TTC21B	Q7Z4L5	1316 aa		15.63	■□□□□ 0.09
SORBS3-222	ENST00000524057	IL2RB	P14784	551 aa		15.62	■□□□□ 0.09
SORBS3-222	ENST00000524057	NLRP2	Q9NX02	1062 aa		15.62	■□□□□ 0.09
SORBS3-222	ENST00000524057	BTAF1	O14981	1849 aa		15.61	■□□□□ 0.09
SORBS3-222	ENST00000524057	TRPM1	Q7Z4N2	1603 aa		15.61	■□□□□ 0.09
SORBS3-222	ENST00000524057	PIK3C2A	O00443	1686 aa		15.61	■□□□□ 0.09
SORBS3-222	ENST00000524057	DNAJC5G	Q8N7S2	189 aa		15.61	■□□□□ 0.09
SORBS3-222	ENST00000524057	CENPJ	Q9HC77	1338 aa	Predicted RBP	15.61	■□□□□ 0.09
SORBS3-222	ENST00000524057	TRIM26	Q12899	539 aa	Predicted RBP	15.6	■□□□□ 0.09
SORBS3-222	ENST00000524057	ZNF692	Q9BU19	519 aa	Predicted RBP	15.6	■□□□□ 0.09
SORBS3-222	ENST00000524057	ADCY9	O60503	1353 aa		15.6	■□□□□ 0.09
SORBS3-222	ENST00000524057	ABCC6	O95255	1503 aa		15.59	■□□□□ 0.09
SORBS3-222	ENST00000524057	COL23A1	Q86Y22	540 aa	Predicted RBP	15.59	■□□□□ 0.09
SORBS3-222	ENST00000524057	QSER1	Q2KHR3	1735 aa		15.59	■□□□□ 0.09
SORBS3-222	ENST00000524057	KIF3C	O14782	793 aa		15.58	■□□□□ 0.08
SORBS3-222	ENST00000524057	MSH5	O43196	834 aa		15.58	■□□□□ 0.08
SORBS3-222	ENST00000524057	CD2AP	Q9Y5K6	639 aa		15.58	■□□□□ 0.08
SORBS3-222	ENST00000524057	KAT6B	Q8WYB5	2073 aa		15.57	■□□□□ 0.08
SORBS3-222	ENST00000524057	DDX54	Q8TDD1	881 aa	Known RBP	15.57	■□□□□ 0.08
SORBS3-222	ENST00000524057	ERBB3	P21860	1342 aa		15.57	■□□□□ 0.08
SORBS3-222	ENST00000524057	PRIM1	P49642	420 aa	Known RBP	15.56	■□□□□ 0.08
SORBS3-222	ENST00000524057	APLP1	P51693	650 aa		15.56	■□□□□ 0.08
SORBS3-222	ENST00000524057	MSL1	Q68DK7	614 aa		15.56	■□□□□ 0.08
SORBS3-222	ENST00000524057	NFAT5	O94916	1531 aa		15.55	■□□□□ 0.08
SORBS3-222	ENST00000524057	TTC21A	Q8NDW8	1320 aa		15.55	■□□□□ 0.08
SORBS3-222	ENST00000524057	SYTL4	Q96C24	671 aa	Predicted RBP	15.55	■□□□□ 0.08
SORBS3-222	ENST00000524057	ANKRD24	Q8TF21	1146 aa		15.54	■□□□□ 0.08
SORBS3-222	ENST00000524057	TUBGCP6	Q96RT7	1819 aa		15.53	■□□□□ 0.08
SORBS3-222	ENST00000524057	COL13A1	Q5TAT6	717 aa	Predicted RBP	15.53	■□□□□ 0.08
SORBS3-222	ENST00000524057	CCNL1	Q9UK58	526 aa	Predicted RBP	15.53	■□□□□ 0.08
SORBS3-222	ENST00000524057	EVC2	Q86UK5	1308 aa		15.51	■□□□□ 0.07
SORBS3-222	ENST00000524057	CAPN15	O75808	1086 aa		15.5	■□□□□ 0.07
SORBS3-222	ENST00000524057	WWC3	Q9ULE0	1092 aa		15.5	■□□□□ 0.07
SORBS3-222	ENST00000524057	KIAA1210	Q9ULL0	1709 aa		15.5	■□□□□ 0.07
SORBS3-222	ENST00000524057	QRICH2	Q9H0J4	1663 aa		15.5	■□□□□ 0.07

Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms