RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	NISCH	Q9Y2I1	1504 aa		27.65	■■■□□ 2.02
SORBS3-222	ENST00000524057	ABCC9	O60706	1549 aa		25.74	■■□□□ 1.71
SORBS3-222	ENST00000524057	CCDC180	Q9P1Z9	1646 aa		24.97	■■□□□ 1.59
SORBS3-222	ENST00000524057	DNAJC5B	Q9UF47	199 aa		24.87	■■□□□ 1.57
SORBS3-222	ENST00000524057	RB1CC1	Q8TDY2	1594 aa		24.14	■■□□□ 1.45
SORBS3-222	ENST00000524057	PABPN1	Q86U42	306 aa	Known RBP eCLIP	23.96	■■□□□ 1.43
SORBS3-222	ENST00000524057	NACAD	O15069	1562 aa		23.83	■■□□□ 1.41
SORBS3-222	ENST00000524057	DCAF8L2	P0C7V8	631 aa		23.76	■■□□□ 1.39
SORBS3-222	ENST00000524057	UNC13A	Q9UPW8	1703 aa		23.55	■■□□□ 1.36
SORBS3-222	ENST00000524057	BICRA	Q9NZM4	1560 aa		23.51	■■□□□ 1.35
SORBS3-222	ENST00000524057	MYO15B	Q96JP2	1530 aa		23.29	■■□□□ 1.32
SORBS3-222	ENST00000524057	DNAJC5	Q9H3Z4	198 aa		23.27	■■□□□ 1.32
SORBS3-222	ENST00000524057	CECR2	Q9BXF3	1484 aa		23.24	■■□□□ 1.31
SORBS3-222	ENST00000524057	CC2D2A	Q9P2K1	1620 aa		23.18	■■□□□ 1.3
SORBS3-222	ENST00000524057	SHROOM4	Q9ULL8	1493 aa		23.04	■■□□□ 1.28
SORBS3-222	ENST00000524057	EIF4G1	Q04637	1599 aa	Known RBP	22.96	■■□□□ 1.27
SORBS3-222	ENST00000524057	SCRIB	Q14160	1630 aa		22.77	■■□□□ 1.24
SORBS3-222	ENST00000524057	DCAF1	Q9Y4B6	1507 aa		22.75	■■□□□ 1.23
SORBS3-222	ENST00000524057	ZCCHC6	Q5VYS8	1495 aa	Known RBP	22.73	■■□□□ 1.23
SORBS3-222	ENST00000524057	CUX2	O14529	1486 aa		22.39	■■□□□ 1.17
SORBS3-222	ENST00000524057	ERCC6	Q03468	1493 aa		22.23	■■□□□ 1.15
SORBS3-222	ENST00000524057	NCAPD3	P42695	1498 aa		22.08	■■□□□ 1.12
SORBS3-222	ENST00000524057	TRIM41	Q8WV44	630 aa		21.96	■■□□□ 1.11
SORBS3-222	ENST00000524057	NES	P48681	1621 aa		21.94	■■□□□ 1.1
SORBS3-222	ENST00000524057	ATAD2B	Q9ULI0	1458 aa		21.9	■■□□□ 1.1
SORBS3-222	ENST00000524057	HMGXB3	Q12766	1538 aa		21.75	■■□□□ 1.07
SORBS3-222	ENST00000524057	SMARCA2	P51531	1590 aa		21.74	■■□□□ 1.07
SORBS3-222	ENST00000524057	THOC2	Q8NI27	1593 aa	Known RBP	21.74	■■□□□ 1.07
SORBS3-222	ENST00000524057	SMARCA4	P51532	1647 aa		21.66	■■□□□ 1.06
SORBS3-222	ENST00000524057	BAZ1B	Q9UIG0	1483 aa	Known RBP	21.62	■■□□□ 1.05
SORBS3-222	ENST00000524057	LAMC3	Q9Y6N6	1575 aa		21.6	■■□□□ 1.05
SORBS3-222	ENST00000524057	PDS5B	Q9NTI5	1447 aa		21.56	■■□□□ 1.04
SORBS3-222	ENST00000524057	KIF21A	Q7Z4S6	1674 aa		21.53	■■□□□ 1.04
SORBS3-222	ENST00000524057	PEG3	Q9GZU2	1588 aa		21.45	■■□□□ 1.02
SORBS3-222	ENST00000524057	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	21.45	■■□□□ 1.02
SORBS3-222	ENST00000524057	OSCAR	Q8IYS5	282 aa		21.4	■■□□□ 1.02
SORBS3-222	ENST00000524057	CADPS	Q9ULU8	1353 aa		21.39	■■□□□ 1.02
SORBS3-222	ENST00000524057	MRC2	Q9UBG0	1479 aa		21.38	■■□□□ 1.01
SORBS3-222	ENST00000524057	WDR62	O43379	1518 aa		21.33	■■□□□ 1
SORBS3-222	ENST00000524057	MROH2B	Q7Z745	1585 aa		21.31	■■□□□ 1
SORBS3-222	ENST00000524057	CEP164	Q9UPV0	1460 aa		21.15	■□□□□ 0.98
SORBS3-222	ENST00000524057	FANCD2	Q9BXW9	1451 aa		21.1	■□□□□ 0.97
SORBS3-222	ENST00000524057	RIMBP3C	A6NJZ7	1639 aa		21.06	■□□□□ 0.96
SORBS3-222	ENST00000524057	RIMBP3B	A6NNM3	1639 aa		21.06	■□□□□ 0.96
SORBS3-222	ENST00000524057	RIMBP3	Q9UFD9	1639 aa		21.06	■□□□□ 0.96
SORBS3-222	ENST00000524057	WIZ	O95785	1651 aa		20.99	■□□□□ 0.95
SORBS3-222	ENST00000524057	CFTR	P13569	1480 aa		20.98	■□□□□ 0.95
SORBS3-222	ENST00000524057	URB2	Q14146	1524 aa	Known RBP	20.98	■□□□□ 0.95
SORBS3-222	ENST00000524057	CYB5RL	Q6IPT4	315 aa		20.96	■□□□□ 0.95
SORBS3-222	ENST00000524057	ARHGEF11	O15085	1522 aa		20.94	■□□□□ 0.94
SORBS3-222	ENST00000524057	TRH	P20396	242 aa	Predicted RBP	20.91	■□□□□ 0.94
SORBS3-222	ENST00000524057	ZNF608	Q9ULD9	1512 aa	Predicted RBP	20.85	■□□□□ 0.93
SORBS3-222	ENST00000524057	IFT140	Q96RY7	1462 aa		20.77	■□□□□ 0.92
SORBS3-222	ENST00000524057	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.76	■□□□□ 0.91
SORBS3-222	ENST00000524057	ARAP1	Q96P48	1450 aa		20.7	■□□□□ 0.9
SORBS3-222	ENST00000524057	RSF1	Q96T23	1441 aa	Predicted RBP	20.66	■□□□□ 0.9
SORBS3-222	ENST00000524057	TOP2A	P11388	1531 aa	Known RBP	20.64	■□□□□ 0.9
SORBS3-222	ENST00000524057	FBLN2	P98095	1184 aa		20.64	■□□□□ 0.89
SORBS3-222	ENST00000524057	TOPBP1	Q92547	1522 aa		20.63	■□□□□ 0.89
SORBS3-222	ENST00000524057	AQR	O60306	1485 aa	Known RBP eCLIP	20.61	■□□□□ 0.89	3e-7	■■□□□ 11.5
SORBS3-222	ENST00000524057	EIF4G3	O43432	1585 aa	Known RBP	20.6	■□□□□ 0.89
SORBS3-222	ENST00000524057	CHD1	O14646	1710 aa		20.56	■□□□□ 0.88
SORBS3-222	ENST00000524057	PRDM2	Q13029	1718 aa		20.55	■□□□□ 0.88
SORBS3-222	ENST00000524057	ABCC8	Q09428	1581 aa		20.53	■□□□□ 0.88
SORBS3-222	ENST00000524057	CCDC88B	A6NC98	1476 aa		20.51	■□□□□ 0.87
SORBS3-222	ENST00000524057	TARBP1	Q13395	1621 aa	Known RBP	20.47	■□□□□ 0.87
SORBS3-222	ENST00000524057	DNMBP	Q6XZF7	1577 aa		20.45	■□□□□ 0.86
SORBS3-222	ENST00000524057	TDRD9	Q8NDG6	1382 aa	Known RBP	20.4	■□□□□ 0.86
SORBS3-222	ENST00000524057	POLA1	P09884	1462 aa	Predicted RBP	20.37	■□□□□ 0.85
SORBS3-222	ENST00000524057	CHMP7	Q8WUX9	453 aa	Predicted RBP	20.37	■□□□□ 0.85
SORBS3-222	ENST00000524057	RAD54L2	Q9Y4B4	1467 aa		20.37	■□□□□ 0.85
SORBS3-222	ENST00000524057	CLASP1	Q7Z460	1538 aa		20.35	■□□□□ 0.85
SORBS3-222	ENST00000524057	SOGA1	O94964	1423 aa		20.33	■□□□□ 0.84
SORBS3-222	ENST00000524057	SNAPC4	Q5SXM2	1469 aa		20.3	■□□□□ 0.84
SORBS3-222	ENST00000524057	SYNJ1	O43426	1573 aa		20.26	■□□□□ 0.83
SORBS3-222	ENST00000524057	GAPVD1	Q14C86	1478 aa		20.23	■□□□□ 0.83
SORBS3-222	ENST00000524057	MAGI1	Q96QZ7	1491 aa	Predicted RBP	20.21	■□□□□ 0.83
SORBS3-222	ENST00000524057	SYNJ2	O15056	1496 aa		20.18	■□□□□ 0.82
SORBS3-222	ENST00000524057	GRIN2B	Q13224	1484 aa		20.17	■□□□□ 0.82
SORBS3-222	ENST00000524057	FGD5	Q6ZNL6	1462 aa		20.16	■□□□□ 0.82
SORBS3-222	ENST00000524057	WDR97	A6NE52	1622 aa		20.15	■□□□□ 0.82
SORBS3-222	ENST00000524057	CUX1	P39880	1505 aa		20.04	■□□□□ 0.8
SORBS3-222	ENST00000524057	ERCC6L2	Q5T890	1561 aa		20.04	■□□□□ 0.8
SORBS3-222	ENST00000524057	ILDR1	Q86SU0	546 aa	Predicted RBP	19.96	■□□□□ 0.79
SORBS3-222	ENST00000524057	PBRM1	Q86U86	1689 aa		19.95	■□□□□ 0.78
SORBS3-222	ENST00000524057	CEP170	Q5SW79	1584 aa		19.91	■□□□□ 0.78
SORBS3-222	ENST00000524057	KDM4F	A0A1W2PPD8	638 aa		19.9	■□□□□ 0.78
SORBS3-222	ENST00000524057	GRIN2A	Q12879	1464 aa		19.9	■□□□□ 0.78
SORBS3-222	ENST00000524057	KIF13A	Q9H1H9	1805 aa		19.9	■□□□□ 0.78
SORBS3-222	ENST00000524057	ABCA10	Q8WWZ4	1543 aa		19.88	■□□□□ 0.77
SORBS3-222	ENST00000524057	NUP160	Q12769	1436 aa		19.87	■□□□□ 0.77
SORBS3-222	ENST00000524057	FAM69C	Q0P6D2	419 aa		19.87	■□□□□ 0.77
SORBS3-222	ENST00000524057	ABCA5	Q8WWZ7	1642 aa		19.86	■□□□□ 0.77
SORBS3-222	ENST00000524057	SHROOM2	Q13796	1616 aa		19.81	■□□□□ 0.76
SORBS3-222	ENST00000524057	ABCC10	Q5T3U5	1492 aa		19.78	■□□□□ 0.76
SORBS3-222	ENST00000524057	PRG4	Q92954	1404 aa	Predicted RBP	19.77	■□□□□ 0.76
SORBS3-222	ENST00000524057	JPH4	Q96JJ6	628 aa		19.77	■□□□□ 0.76
SORBS3-222	ENST00000524057	NPM1	P06748	294 aa	Known RBP eCLIP	19.76	■□□□□ 0.75
SORBS3-222	ENST00000524057	ADAMTS12	P58397	1594 aa		19.75	■□□□□ 0.75
SORBS3-222	ENST00000524057	FHAD1	B1AJZ9	1412 aa		19.75	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms