RNA–Protein interactions for RNA: ENST00000520931.5

TNIP1-208, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-208ENST00000520931 RIMS2Q9UQ26 1411 aa21.78■■□□□ 1.08
TNIP1-208ENST00000520931 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
TNIP1-208ENST00000520931 ATP7BP35670 1465 aa21.77■■□□□ 1.08
TNIP1-208ENST00000520931 IFT57Q9NWB7 429 aa21.77■■□□□ 1.08
TNIP1-208ENST00000520931 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.08
TNIP1-208ENST00000520931 FOXD4L1Q9NU39 408 aa21.76■■□□□ 1.07
TNIP1-208ENST00000520931 TSPOAP1O95153 1857 aa21.76■■□□□ 1.07
TNIP1-208ENST00000520931 CALD1Q05682 793 aaKnown RBP21.75■■□□□ 1.07
TNIP1-208ENST00000520931 ZNF428Q96B54 188 aa21.75■■□□□ 1.07
TNIP1-208ENST00000520931 NUDT16Q96DE0 195 aaKnown RBP21.75■■□□□ 1.07
TNIP1-208ENST00000520931 COG3Q96JB2 828 aa21.75■■□□□ 1.07
TNIP1-208ENST00000520931 BRPF1P55201 1214 aaPredicted RBP21.75■■□□□ 1.07
TNIP1-208ENST00000520931 BMP2KLQ5H9B9 411 aa21.75■■□□□ 1.07
TNIP1-208ENST00000520931 METP08581 1390 aa21.75■■□□□ 1.07
TNIP1-208ENST00000520931 RBM25P49756 843 aaKnown RBP21.74■■□□□ 1.07
TNIP1-208ENST00000520931 TRAK2O60296 914 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 ZNF853P0CG23 659 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 KRT24Q2M2I5 525 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
TNIP1-208ENST00000520931 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 EDC4Q6P2E9 1401 aaKnown RBP21.73■■□□□ 1.07
TNIP1-208ENST00000520931 NUTM2FA1L443 756 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 HSP90AB1P08238 724 aaKnown RBP21.73■■□□□ 1.07
TNIP1-208ENST00000520931 TBC1D9Q6ZT07 1266 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 AEBP1Q8IUX7 1158 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 ARHGAP45Q92619 1136 aa21.73■■□□□ 1.07
TNIP1-208ENST00000520931 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
TNIP1-208ENST00000520931 CD2BP2O95400 341 aaKnown RBP21.72■■□□□ 1.07
TNIP1-208ENST00000520931 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
TNIP1-208ENST00000520931 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
TNIP1-208ENST00000520931 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
TNIP1-208ENST00000520931 ABCC4O15439 1325 aa21.72■■□□□ 1.07
TNIP1-208ENST00000520931 CPSF1Q10570 1443 aaKnown RBP21.72■■□□□ 1.07
TNIP1-208ENST00000520931 CPS1P31327 1500 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 GOLGA6L3A6NEY3 463 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 PANK2Q9BZ23 570 aa21.71■■□□□ 1.07
TNIP1-208ENST00000520931 XRCC6P12956 609 aaKnown RBP eCLIP21.7■■□□□ 1.06
TNIP1-208ENST00000520931 KIF2CQ99661 725 aa21.7■■□□□ 1.06
TNIP1-208ENST00000520931 SOX12O15370 315 aa21.7■■□□□ 1.06
TNIP1-208ENST00000520931 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
TNIP1-208ENST00000520931 CDK12Q9NYV4 1490 aaPredicted RBP21.69■■□□□ 1.06
TNIP1-208ENST00000520931 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
TNIP1-208ENST00000520931 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
TNIP1-208ENST00000520931 HSP90AA1P07900 732 aaKnown RBP21.69■■□□□ 1.06
TNIP1-208ENST00000520931 SETD1AO15047 1707 aaKnown RBP21.68■■□□□ 1.06
TNIP1-208ENST00000520931 FAM43AQ8N2R8 423 aa21.68■■□□□ 1.06
TNIP1-208ENST00000520931 CHMP4BQ9H444 224 aaKnown RBP21.68■■□□□ 1.06
TNIP1-208ENST00000520931 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
TNIP1-208ENST00000520931 SULT6B1Q6IMI4 303 aa21.67■■□□□ 1.06
TNIP1-208ENST00000520931 APBB1O00213 710 aa21.67■■□□□ 1.06
TNIP1-208ENST00000520931 SNX21Q969T3 373 aa21.66■■□□□ 1.06
TNIP1-208ENST00000520931 API5Q9BZZ5 524 aaKnown RBP21.66■■□□□ 1.06
TNIP1-208ENST00000520931 MCM10Q7L590 875 aa21.66■■□□□ 1.06
TNIP1-208ENST00000520931 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
TNIP1-208ENST00000520931 TNPO1Q92973 898 aaKnown RBP21.66■■□□□ 1.06
TNIP1-208ENST00000520931 DDIT3P35638 169 aa21.65■■□□□ 1.06
TNIP1-208ENST00000520931 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
TNIP1-208ENST00000520931 GSPT1P15170 499 aaKnown RBP21.64■■□□□ 1.06
TNIP1-208ENST00000520931 NCOA3Q9Y6Q9 1424 aa21.64■■□□□ 1.06
TNIP1-208ENST00000520931 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.05
TNIP1-208ENST00000520931 FSD2A1L4K1 749 aa21.63■■□□□ 1.05
TNIP1-208ENST00000520931 RRAGDQ9NQL2 400 aaPredicted RBP21.63■■□□□ 1.05
TNIP1-208ENST00000520931 EIF4A2Q14240 407 aaKnown RBP21.63■■□□□ 1.05
TNIP1-208ENST00000520931 NRXN3Q9Y4C0 1643 aa21.63■■□□□ 1.05
TNIP1-208ENST00000520931 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
TNIP1-208ENST00000520931 OTUD7AQ8TE49 926 aaPredicted RBP21.62■■□□□ 1.05
TNIP1-208ENST00000520931 PLEKHM2Q8IWE5 1019 aa21.62■■□□□ 1.05
TNIP1-208ENST00000520931 SPATA31D1Q6ZQQ2 1576 aa21.62■■□□□ 1.05
TNIP1-208ENST00000520931 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
TNIP1-208ENST00000520931 EIF5BO60841 1220 aaKnown RBP21.61■■□□□ 1.05
TNIP1-208ENST00000520931 CDC45O75419 566 aa21.61■■□□□ 1.05
TNIP1-208ENST00000520931 ESF1Q9H501 851 aaKnown RBP21.61■■□□□ 1.05
TNIP1-208ENST00000520931 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
TNIP1-208ENST00000520931 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
TNIP1-208ENST00000520931 K7ELQ4 463 aaPredicted RBP21.59■■□□□ 1.05
TNIP1-208ENST00000520931 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
TNIP1-208ENST00000520931 GAS2L2Q8NHY3 880 aa21.59■■□□□ 1.05
TNIP1-208ENST00000520931 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.05
TNIP1-208ENST00000520931 DCTPP1Q9H773 170 aa21.58■■□□□ 1.05
TNIP1-208ENST00000520931 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.04
TNIP1-208ENST00000520931 AK9Q5TCS8 1911 aa21.57■■□□□ 1.04
TNIP1-208ENST00000520931 MON2Q7Z3U7 1717 aa21.57■■□□□ 1.04
TNIP1-208ENST00000520931 RAB3GAP1Q15042 981 aa21.57■■□□□ 1.04
TNIP1-208ENST00000520931 MEIS3Q99687 375 aa21.56■■□□□ 1.04
TNIP1-208ENST00000520931 ACEP12821 1306 aa21.56■■□□□ 1.04
TNIP1-208ENST00000520931 MSH6P52701 1360 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 ROBO2Q9HCK4 1378 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 SSFA2P28290 1259 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 INTS3Q68E01 1043 aaKnown RBP21.55■■□□□ 1.04
TNIP1-208ENST00000520931 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 TTC22Q5TAA0 569 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 GBP4Q96PP9 640 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 AGLP35573 1532 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 ITSN1Q15811 1721 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 DIP2BQ9P265 1576 aa21.55■■□□□ 1.04
TNIP1-208ENST00000520931 FOXO3O43524 673 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms