RNA–Protein interactions for RNA: ENST00000519445.5

KCNQ3-202, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-202ENST00000519445 PMFBP1Q8TBY8 1022 aa29.3■■■□□ 2.28
KCNQ3-202ENST00000519445 ATF7IPQ6VMQ6 1270 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 COG3Q96JB2 828 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 CCDC61Q9Y6R9 512 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 ADGRB2O60241 1585 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 ROBO2Q9HCK4 1378 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 FCHSD2O94868 740 aa29.29■■■□□ 2.28
KCNQ3-202ENST00000519445 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
KCNQ3-202ENST00000519445 CALD1Q05682 793 aaKnown RBP29.28■■■□□ 2.28
KCNQ3-202ENST00000519445 CPS1P31327 1500 aa29.28■■■□□ 2.28
KCNQ3-202ENST00000519445 LRRC7Q96NW7 1537 aa29.28■■■□□ 2.28
KCNQ3-202ENST00000519445 SPATA31D1Q6ZQQ2 1576 aa29.27■■■□□ 2.28
KCNQ3-202ENST00000519445 IL13P35225 146 aa29.27■■■□□ 2.28
KCNQ3-202ENST00000519445 ANTXR1Q9H6X2 564 aa29.26■■■□□ 2.28
KCNQ3-202ENST00000519445 KRT24Q2M2I5 525 aa29.26■■■□□ 2.27
KCNQ3-202ENST00000519445 FGD1P98174 961 aa29.26■■■□□ 2.27
KCNQ3-202ENST00000519445 KIAA1211Q6ZU35 1233 aa29.25■■■□□ 2.27
KCNQ3-202ENST00000519445 TRIM44Q96DX7 344 aaPredicted RBP29.25■■■□□ 2.27
KCNQ3-202ENST00000519445 RWDD1Q9H446 243 aaPredicted RBP29.25■■■□□ 2.27
KCNQ3-202ENST00000519445 TNRQ92752 1358 aa29.25■■■□□ 2.27
KCNQ3-202ENST00000519445 MAP2P11137 1827 aaKnown RBP29.24■■■□□ 2.27
KCNQ3-202ENST00000519445 PPP6R1Q9UPN7 881 aa29.23■■■□□ 2.27
KCNQ3-202ENST00000519445 TPM2P07951 284 aa29.23■■■□□ 2.27
KCNQ3-202ENST00000519445 RBM33Q96EV2 1170 aaKnown RBP29.23■■■□□ 2.27
KCNQ3-202ENST00000519445 AGLP35573 1532 aa29.22■■■□□ 2.27
KCNQ3-202ENST00000519445 NFE2L2Q16236 605 aa29.22■■■□□ 2.27
KCNQ3-202ENST00000519445 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.22■■■□□ 2.27
KCNQ3-202ENST00000519445 NRXN3Q9Y4C0 1643 aa29.22■■■□□ 2.27
KCNQ3-202ENST00000519445 MCM4P33991 863 aa29.21■■■□□ 2.27
KCNQ3-202ENST00000519445 MRE11P49959 708 aa29.21■■■□□ 2.27
KCNQ3-202ENST00000519445 GRPEL1Q9HAV7 217 aa29.21■■■□□ 2.27
KCNQ3-202ENST00000519445 MBIPQ9NS73 344 aa29.21■■■□□ 2.27
KCNQ3-202ENST00000519445 NUTM2GQ5VZR2 741 aa29.2■■■□□ 2.27
KCNQ3-202ENST00000519445 TRAK2O60296 914 aa29.2■■■□□ 2.26
KCNQ3-202ENST00000519445 ACEP12821 1306 aa29.19■■■□□ 2.26
KCNQ3-202ENST00000519445 HSP90AB2PQ58FF8 381 aa29.19■■■□□ 2.26
KCNQ3-202ENST00000519445 C8orf58Q8NAV2 365 aa29.19■■■□□ 2.26
KCNQ3-202ENST00000519445 SULT6B1Q6IMI4 303 aa29.19■■■□□ 2.26
KCNQ3-202ENST00000519445 CPSF1Q10570 1443 aaKnown RBP29.18■■■□□ 2.26
KCNQ3-202ENST00000519445 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
KCNQ3-202ENST00000519445 KIF20BQ96Q89 1820 aa29.18■■■□□ 2.26
KCNQ3-202ENST00000519445 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
KCNQ3-202ENST00000519445 TMEM2Q9UHN6 1383 aa29.17■■■□□ 2.26
KCNQ3-202ENST00000519445 MIS18AQ9NYP9 233 aa29.16■■■□□ 2.26
KCNQ3-202ENST00000519445 MED14O60244 1454 aa29.16■■■□□ 2.26
KCNQ3-202ENST00000519445 MCM10Q7L590 875 aa29.16■■■□□ 2.26
KCNQ3-202ENST00000519445 LNPKQ9C0E8 428 aa29.16■■■□□ 2.26
KCNQ3-202ENST00000519445 FAM13BQ9NYF5 915 aa29.16■■■□□ 2.26
KCNQ3-202ENST00000519445 EDC4Q6P2E9 1401 aaKnown RBP29.15■■■□□ 2.26
KCNQ3-202ENST00000519445 VAMP4O75379 141 aa29.15■■■□□ 2.26
KCNQ3-202ENST00000519445 TBC1D2Q9BYX2 928 aa29.15■■■□□ 2.26
KCNQ3-202ENST00000519445 ATP7BP35670 1465 aa29.14■■■□□ 2.26
KCNQ3-202ENST00000519445 ANKRD26Q9UPS8 1709 aa29.14■■■□□ 2.26
KCNQ3-202ENST00000519445 DDX19BQ9UMR2 479 aa29.14■■■□□ 2.26
KCNQ3-202ENST00000519445 KIF13AQ9H1H9 1805 aa29.13■■■□□ 2.25
KCNQ3-202ENST00000519445 EIF4A2Q14240 407 aaKnown RBP29.13■■■□□ 2.25
KCNQ3-202ENST00000519445 ZHX1Q9UKY1 873 aaPredicted RBP29.12■■■□□ 2.25
KCNQ3-202ENST00000519445 ZBTB40Q9NUA8 1239 aa29.12■■■□□ 2.25
KCNQ3-202ENST00000519445 MFAP1P55081 439 aaKnown RBP29.12■■■□□ 2.25
KCNQ3-202ENST00000519445 IL16Q14005 1332 aa29.11■■■□□ 2.25
KCNQ3-202ENST00000519445 FOXO3O43524 673 aa29.11■■■□□ 2.25
KCNQ3-202ENST00000519445 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
KCNQ3-202ENST00000519445 AMOTL2Q9Y2J4 779 aa29.1■■■□□ 2.25
KCNQ3-202ENST00000519445 PRDM10Q9NQV6 1147 aa29.1■■■□□ 2.25
KCNQ3-202ENST00000519445 DLC1Q96QB1 1528 aa29.1■■■□□ 2.25
KCNQ3-202ENST00000519445 HDGFP51858 240 aaKnown RBP29.09■■■□□ 2.25
KCNQ3-202ENST00000519445 TWISTNBQ3B726 338 aaPredicted RBP29.09■■■□□ 2.25
KCNQ3-202ENST00000519445 ADAMTS13Q76LX8 1427 aa29.08■■■□□ 2.25
KCNQ3-202ENST00000519445 REREQ9P2R6 1566 aa29.08■■■□□ 2.25
KCNQ3-202ENST00000519445 CT47B1P0C2W7 299 aaPredicted RBP29.07■■■□□ 2.24
KCNQ3-202ENST00000519445 MRPL50Q8N5N7 158 aaKnown RBP29.07■■■□□ 2.24
KCNQ3-202ENST00000519445 PDE4CQ08493 712 aa29.06■■■□□ 2.24
KCNQ3-202ENST00000519445 KIF16BQ96L93 1317 aa29.06■■■□□ 2.24
KCNQ3-202ENST00000519445 IPO8O15397 1037 aaKnown RBP29.05■■■□□ 2.24
KCNQ3-202ENST00000519445 PTPRUQ92729 1446 aa29.05■■■□□ 2.24
KCNQ3-202ENST00000519445 NCBP3Q53F19 620 aaKnown RBP29.03■■■□□ 2.24
KCNQ3-202ENST00000519445 GNAI1P63096 354 aa29.03■■■□□ 2.24
KCNQ3-202ENST00000519445 GAS2L3Q86XJ1 694 aa29.03■■■□□ 2.24
KCNQ3-202ENST00000519445 NGDNQ8NEJ9 315 aaKnown RBP29.02■■■□□ 2.24
KCNQ3-202ENST00000519445 ANKRD45Q5TZF3 282 aa29.01■■■□□ 2.23
KCNQ3-202ENST00000519445 TRHP20396 242 aaPredicted RBP29■■■□□ 2.23
KCNQ3-202ENST00000519445 LTV1Q96GA3 475 aaPredicted RBP29■■■□□ 2.23
KCNQ3-202ENST00000519445 APBB1O00213 710 aa29■■■□□ 2.23
KCNQ3-202ENST00000519445 ZNF692Q9BU19 519 aaPredicted RBP29■■■□□ 2.23
KCNQ3-202ENST00000519445 IFT57Q9NWB7 429 aa29■■■□□ 2.23
KCNQ3-202ENST00000519445 ZBTB7BO15156 539 aaPredicted RBP28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 EID1Q9Y6B2 187 aa28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 ZNF853P0CG23 659 aa28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 HDAC1Q13547 482 aaPredicted RBP28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 ALDH1L2Q3SY69 923 aa28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 C14orf37Q86TY3 774 aa28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 CFAP44Q96MT7 982 aa28.99■■■□□ 2.23
KCNQ3-202ENST00000519445 CDC42BPGQ6DT37 1551 aa28.98■■■□□ 2.23
KCNQ3-202ENST00000519445 SIRT2Q8IXJ6 389 aa28.98■■■□□ 2.23
KCNQ3-202ENST00000519445 UPF2Q9HAU5 1272 aaKnown RBP28.97■■■□□ 2.23
KCNQ3-202ENST00000519445 R3HCC1Q9Y3T6 440 aaKnown RBP28.97■■■□□ 2.23
KCNQ3-202ENST00000519445 SMC5Q8IY18 1101 aa28.96■■■□□ 2.23
KCNQ3-202ENST00000519445 NECTIN2Q92692 538 aa28.96■■■□□ 2.23
KCNQ3-202ENST00000519445 CDK12Q9NYV4 1490 aaPredicted RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms