RNA–Protein interactions for RNA: ENST00000515200.5

GRAMD2B-217, Transcript of GRAM domain containing 2B, humanhuman

TSL 5 BASIC

Gene GRAMD2B, Length 3,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-217ENST00000515200 IL13P35225 146 aa20.41■□□□□ 0.86
GRAMD2B-217ENST00000515200 MFAP1P55081 439 aaKnown RBP20.41■□□□□ 0.86
GRAMD2B-217ENST00000515200 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
GRAMD2B-217ENST00000515200 NSD2O96028 1365 aa20.4■□□□□ 0.86
GRAMD2B-217ENST00000515200 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.4■□□□□ 0.86
GRAMD2B-217ENST00000515200 ZFYVE9O95405 1425 aa20.4■□□□□ 0.86
GRAMD2B-217ENST00000515200 CPS1P31327 1500 aa20.4■□□□□ 0.86
GRAMD2B-217ENST00000515200 FCHSD2O94868 740 aa20.39■□□□□ 0.85
GRAMD2B-217ENST00000515200 NLRP1Q9C000 1473 aa20.39■□□□□ 0.85
GRAMD2B-217ENST00000515200 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.85
GRAMD2B-217ENST00000515200 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
GRAMD2B-217ENST00000515200 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
GRAMD2B-217ENST00000515200 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
GRAMD2B-217ENST00000515200 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
GRAMD2B-217ENST00000515200 HSP90AA1P07900 732 aaKnown RBP20.38■□□□□ 0.85
GRAMD2B-217ENST00000515200 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
GRAMD2B-217ENST00000515200 TMEM2Q9UHN6 1383 aa20.36■□□□□ 0.85
GRAMD2B-217ENST00000515200 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
GRAMD2B-217ENST00000515200 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
GRAMD2B-217ENST00000515200 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
GRAMD2B-217ENST00000515200 KCNA6P17658 529 aa20.35■□□□□ 0.85
GRAMD2B-217ENST00000515200 HDGFP51858 240 aaKnown RBP20.35■□□□□ 0.85
GRAMD2B-217ENST00000515200 NLRP6P59044 892 aa20.35■□□□□ 0.85
GRAMD2B-217ENST00000515200 AMPHP49418 695 aa20.34■□□□□ 0.85
GRAMD2B-217ENST00000515200 NGEFQ8N5V2 710 aa20.34■□□□□ 0.85
GRAMD2B-217ENST00000515200 LRRC7Q96NW7 1537 aa20.34■□□□□ 0.85
GRAMD2B-217ENST00000515200 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.85
GRAMD2B-217ENST00000515200 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
GRAMD2B-217ENST00000515200 ANKRD45Q5TZF3 282 aa20.33■□□□□ 0.84
GRAMD2B-217ENST00000515200 VAMP4O75379 141 aa20.32■□□□□ 0.84
GRAMD2B-217ENST00000515200 MAP2P11137 1827 aaKnown RBP20.32■□□□□ 0.84
GRAMD2B-217ENST00000515200 NINLQ9Y2I6 1382 aa20.3■□□□□ 0.84
GRAMD2B-217ENST00000515200 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
GRAMD2B-217ENST00000515200 F6X3S4 739 aa20.29■□□□□ 0.84
GRAMD2B-217ENST00000515200 DDX19BQ9UMR2 479 aa20.29■□□□□ 0.84
GRAMD2B-217ENST00000515200 SETD1BQ9UPS6 1966 aaKnown RBP20.29■□□□□ 0.84
GRAMD2B-217ENST00000515200 FOXD4L1Q9NU39 408 aa20.29■□□□□ 0.84
GRAMD2B-217ENST00000515200 USP19O94966 1318 aa20.28■□□□□ 0.84
GRAMD2B-217ENST00000515200 MAP3K19Q56UN5 1328 aa20.28■□□□□ 0.84
GRAMD2B-217ENST00000515200 DDRGK1Q96HY6 314 aa20.28■□□□□ 0.84
GRAMD2B-217ENST00000515200 RRP9O43818 475 aaKnown RBP20.27■□□□□ 0.84
GRAMD2B-217ENST00000515200 ABTB2Q8N961 1025 aa20.27■□□□□ 0.84
GRAMD2B-217ENST00000515200 PTPRUQ92729 1446 aa20.27■□□□□ 0.84
GRAMD2B-217ENST00000515200 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
GRAMD2B-217ENST00000515200 EDC4Q6P2E9 1401 aaKnown RBP20.26■□□□□ 0.83
GRAMD2B-217ENST00000515200 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
GRAMD2B-217ENST00000515200 IPO8O15397 1037 aaKnown RBP20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 GNAI1P63096 354 aa20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 ADAMTS13Q76LX8 1427 aa20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 MRPL50Q8N5N7 158 aaKnown RBP20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 ZBTB40Q9NUA8 1239 aa20.25■□□□□ 0.83
GRAMD2B-217ENST00000515200 KIF13AQ9H1H9 1805 aa20.24■□□□□ 0.83
GRAMD2B-217ENST00000515200 MTHFSDQ2M296 383 aaKnown RBP20.24■□□□□ 0.83
GRAMD2B-217ENST00000515200 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
GRAMD2B-217ENST00000515200 CPSF1Q10570 1443 aaKnown RBP20.23■□□□□ 0.83
GRAMD2B-217ENST00000515200 FAM135BQ49AJ0 1406 aa20.23■□□□□ 0.83
GRAMD2B-217ENST00000515200 SMARCA5O60264 1052 aaPredicted RBP20.23■□□□□ 0.83
GRAMD2B-217ENST00000515200 AAMPQ13685 434 aa20.22■□□□□ 0.83
GRAMD2B-217ENST00000515200 G2E3Q7L622 706 aa20.22■□□□□ 0.83
GRAMD2B-217ENST00000515200 ZNF692Q9BU19 519 aaPredicted RBP20.22■□□□□ 0.83
GRAMD2B-217ENST00000515200 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
GRAMD2B-217ENST00000515200 NRXN3Q9Y4C0 1643 aa20.22■□□□□ 0.83
GRAMD2B-217ENST00000515200 ESCO1Q5FWF5 840 aa20.21■□□□□ 0.83
GRAMD2B-217ENST00000515200 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
GRAMD2B-217ENST00000515200 ATP7BP35670 1465 aa20.21■□□□□ 0.83
GRAMD2B-217ENST00000515200 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
GRAMD2B-217ENST00000515200 EYA1Q99502 592 aa20.21■□□□□ 0.83
GRAMD2B-217ENST00000515200 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
GRAMD2B-217ENST00000515200 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
GRAMD2B-217ENST00000515200 TSPYL4Q9UJ04 414 aa20.2■□□□□ 0.82
GRAMD2B-217ENST00000515200 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.82
GRAMD2B-217ENST00000515200 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
GRAMD2B-217ENST00000515200 DDX17Q92841 729 aaKnown RBP20.19■□□□□ 0.82
GRAMD2B-217ENST00000515200 SIRT2Q8IXJ6 389 aa20.19■□□□□ 0.82
GRAMD2B-217ENST00000515200 AGLP35573 1532 aa20.19■□□□□ 0.82
GRAMD2B-217ENST00000515200 USP32Q8NFA0 1604 aa20.19■□□□□ 0.82
GRAMD2B-217ENST00000515200 THEMISQ8N1K5 641 aaPredicted RBP20.18■□□□□ 0.82
GRAMD2B-217ENST00000515200 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
GRAMD2B-217ENST00000515200 ZBTB7BO15156 539 aaPredicted RBP20.18■□□□□ 0.82
GRAMD2B-217ENST00000515200 ANXA1P04083 346 aa20.18■□□□□ 0.82
GRAMD2B-217ENST00000515200 LRRC59Q96AG4 307 aaKnown RBP20.17■□□□□ 0.82
GRAMD2B-217ENST00000515200 ADGRB2O60241 1585 aa20.16■□□□□ 0.82
GRAMD2B-217ENST00000515200 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
GRAMD2B-217ENST00000515200 FGD1P98174 961 aa20.16■□□□□ 0.82
GRAMD2B-217ENST00000515200 MEIS3Q99687 375 aa20.16■□□□□ 0.82
GRAMD2B-217ENST00000515200 KIF20BQ96Q89 1820 aa20.16■□□□□ 0.82
GRAMD2B-217ENST00000515200 CHD1LQ86WJ1 897 aa20.15■□□□□ 0.82
GRAMD2B-217ENST00000515200 MED14O60244 1454 aa20.15■□□□□ 0.82
GRAMD2B-217ENST00000515200 IL16Q14005 1332 aa20.14■□□□□ 0.82
GRAMD2B-217ENST00000515200 ORAI2Q96SN7 254 aa20.14■□□□□ 0.82
GRAMD2B-217ENST00000515200 PDE4CQ08493 712 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 ARID3AQ99856 593 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 RBM42Q9BTD8 480 aaKnown RBP20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 TBC1D2Q9BYX2 928 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 C22orf23Q9BZE7 217 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 PANK2Q9BZ23 570 aa20.13■□□□□ 0.81
GRAMD2B-217ENST00000515200 GZF1Q9H116 711 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms