RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CAPN15O75808 1086 aa17.8■□□□□ 0.44
SMAD5-210ENST00000515005 YBX3P16989 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMAD5-210ENST00000515005 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
SMAD5-210ENST00000515005 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
SMAD5-210ENST00000515005 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
SMAD5-210ENST00000515005 PAPPAQ13219 1627 aa17.78■□□□□ 0.44
SMAD5-210ENST00000515005 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
SMAD5-210ENST00000515005 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
SMAD5-210ENST00000515005 ABTB2Q8N961 1025 aa17.77■□□□□ 0.44
SMAD5-210ENST00000515005 USP19O94966 1318 aa17.76■□□□□ 0.43
SMAD5-210ENST00000515005 ZNF827Q17R98 1081 aa17.76■□□□□ 0.43
SMAD5-210ENST00000515005 ZNF526Q8TF50 670 aaPredicted RBP17.76■□□□□ 0.43
SMAD5-210ENST00000515005 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
SMAD5-210ENST00000515005 WNK3Q9BYP7 1800 aa17.76■□□□□ 0.43
SMAD5-210ENST00000515005 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
SMAD5-210ENST00000515005 GCP02774 474 aa17.75■□□□□ 0.43
SMAD5-210ENST00000515005 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
SMAD5-210ENST00000515005 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
SMAD5-210ENST00000515005 POLD1P28340 1107 aa17.74■□□□□ 0.43
SMAD5-210ENST00000515005 COL13A1Q5TAT6 717 aaPredicted RBP17.74■□□□□ 0.43
SMAD5-210ENST00000515005 COL24A1Q17RW2 1714 aa17.74■□□□□ 0.43
SMAD5-210ENST00000515005 ADGRB1O14514 1584 aa17.73■□□□□ 0.43
SMAD5-210ENST00000515005 ACEP12821 1306 aa17.72■□□□□ 0.43
SMAD5-210ENST00000515005 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
SMAD5-210ENST00000515005 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
SMAD5-210ENST00000515005 SLC16A10Q8TF71 515 aa17.71■□□□□ 0.43
SMAD5-210ENST00000515005 ADCY9O60503 1353 aa17.7■□□□□ 0.42
SMAD5-210ENST00000515005 NHSQ6T4R5 1651 aa17.69■□□□□ 0.42
SMAD5-210ENST00000515005 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
SMAD5-210ENST00000515005 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
SMAD5-210ENST00000515005 CDCA7Q9BWT1 371 aaPredicted RBP17.69■□□□□ 0.42
SMAD5-210ENST00000515005 LRRC4BQ9NT99 713 aa17.69■□□□□ 0.42
SMAD5-210ENST00000515005 APLP1P51693 650 aa17.68■□□□□ 0.42
SMAD5-210ENST00000515005 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
SMAD5-210ENST00000515005 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
SMAD5-210ENST00000515005 PRELPP51888 382 aa17.67■□□□□ 0.42
SMAD5-210ENST00000515005 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
SMAD5-210ENST00000515005 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
SMAD5-210ENST00000515005 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
SMAD5-210ENST00000515005 COL18A1P39060 1754 aa17.66■□□□□ 0.42
SMAD5-210ENST00000515005 EXOC5O00471 708 aa17.66■□□□□ 0.42
SMAD5-210ENST00000515005 KIF3CO14782 793 aa17.66■□□□□ 0.42
SMAD5-210ENST00000515005 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
SMAD5-210ENST00000515005 PNPLA7Q6ZV29 1317 aa17.66■□□□□ 0.42
SMAD5-210ENST00000515005 BTAF1O14981 1849 aa17.65■□□□□ 0.42
SMAD5-210ENST00000515005 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
SMAD5-210ENST00000515005 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
SMAD5-210ENST00000515005 TUBGCP6Q96RT7 1819 aa17.63■□□□□ 0.41
SMAD5-210ENST00000515005 TNS4Q8IZW8 715 aa17.63■□□□□ 0.41
SMAD5-210ENST00000515005 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
SMAD5-210ENST00000515005 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
SMAD5-210ENST00000515005 RGPD5Q99666 1765 aa17.62■□□□□ 0.41
SMAD5-210ENST00000515005 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
SMAD5-210ENST00000515005 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
SMAD5-210ENST00000515005 USP6P35125 1406 aa17.62■□□□□ 0.41
SMAD5-210ENST00000515005 CARD10Q9BWT7 1032 aa17.61■□□□□ 0.41
SMAD5-210ENST00000515005 SLC34A2O95436 690 aa17.6■□□□□ 0.41
SMAD5-210ENST00000515005 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
SMAD5-210ENST00000515005 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
SMAD5-210ENST00000515005 SLIT3O75094 1523 aa17.58■□□□□ 0.41
SMAD5-210ENST00000515005 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
SMAD5-210ENST00000515005 NLRP6P59044 892 aa17.58■□□□□ 0.4
SMAD5-210ENST00000515005 KCNQ4P56696 695 aa17.57■□□□□ 0.4
SMAD5-210ENST00000515005 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
SMAD5-210ENST00000515005 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
SMAD5-210ENST00000515005 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
SMAD5-210ENST00000515005 ABCC6O95255 1503 aa17.54■□□□□ 0.4
SMAD5-210ENST00000515005 HTRA3P83110 453 aa17.54■□□□□ 0.4
SMAD5-210ENST00000515005 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
SMAD5-210ENST00000515005 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
SMAD5-210ENST00000515005 TOMM70O94826 608 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 ARHGEF25Q86VW2 580 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 KLRG1Q96E93 195 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
SMAD5-210ENST00000515005 KDM2AQ9Y2K7 1162 aa17.52■□□□□ 0.4
SMAD5-210ENST00000515005 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.4
SMAD5-210ENST00000515005 MSH5O43196 834 aa17.51■□□□□ 0.39
SMAD5-210ENST00000515005 COL23A1Q86Y22 540 aaPredicted RBP17.51■□□□□ 0.39
SMAD5-210ENST00000515005 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
SMAD5-210ENST00000515005 PCNTO95613 3336 aa17.5■□□□□ 0.39
SMAD5-210ENST00000515005 PIK3C2AO00443 1686 aa17.49■□□□□ 0.39
SMAD5-210ENST00000515005 SOX12O15370 315 aa17.48■□□□□ 0.39
SMAD5-210ENST00000515005 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
SMAD5-210ENST00000515005 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
SMAD5-210ENST00000515005 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
SMAD5-210ENST00000515005 LY75O60449 1722 aa17.44■□□□□ 0.38
SMAD5-210ENST00000515005 IL2RBP14784 551 aa17.44■□□□□ 0.38
SMAD5-210ENST00000515005 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
SMAD5-210ENST00000515005 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
SMAD5-210ENST00000515005 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
SMAD5-210ENST00000515005 KCNH5Q8NCM2 988 aa17.42■□□□□ 0.38
SMAD5-210ENST00000515005 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
SMAD5-210ENST00000515005 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
SMAD5-210ENST00000515005 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SMAD5-210ENST00000515005 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
SMAD5-210ENST00000515005 NFAT5O94916 1531 aa17.39■□□□□ 0.37
SMAD5-210ENST00000515005 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
SMAD5-210ENST00000515005 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms