RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
SMAD5-210ENST00000515005 ABCC9O60706 1549 aa29.2■■■□□ 2.27
SMAD5-210ENST00000515005 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
SMAD5-210ENST00000515005 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
SMAD5-210ENST00000515005 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
SMAD5-210ENST00000515005 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
SMAD5-210ENST00000515005 NACADO15069 1562 aa26.88■■□□□ 1.89
SMAD5-210ENST00000515005 UNC13AQ9UPW8 1703 aa26.75■■□□□ 1.87
SMAD5-210ENST00000515005 DNAJC5Q9H3Z4 198 aa26.68■■□□□ 1.86
SMAD5-210ENST00000515005 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
SMAD5-210ENST00000515005 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
SMAD5-210ENST00000515005 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
SMAD5-210ENST00000515005 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
SMAD5-210ENST00000515005 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
SMAD5-210ENST00000515005 SHROOM4Q9ULL8 1493 aa26.03■■□□□ 1.76
SMAD5-210ENST00000515005 EIF4G1Q04637 1599 aaKnown RBP26■■□□□ 1.75
SMAD5-210ENST00000515005 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
SMAD5-210ENST00000515005 CUX2O14529 1486 aa25.51■■□□□ 1.67
SMAD5-210ENST00000515005 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
SMAD5-210ENST00000515005 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
SMAD5-210ENST00000515005 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
SMAD5-210ENST00000515005 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
SMAD5-210ENST00000515005 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
SMAD5-210ENST00000515005 NESP48681 1621 aa24.83■■□□□ 1.57
SMAD5-210ENST00000515005 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
SMAD5-210ENST00000515005 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
SMAD5-210ENST00000515005 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
SMAD5-210ENST00000515005 SMARCA2P51531 1590 aa24.53■■□□□ 1.52
SMAD5-210ENST00000515005 KIF21AQ7Z4S6 1674 aa24.45■■□□□ 1.5
SMAD5-210ENST00000515005 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
SMAD5-210ENST00000515005 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
SMAD5-210ENST00000515005 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
SMAD5-210ENST00000515005 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
SMAD5-210ENST00000515005 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
SMAD5-210ENST00000515005 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
SMAD5-210ENST00000515005 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
SMAD5-210ENST00000515005 WDR62O43379 1518 aa24.15■■□□□ 1.46
SMAD5-210ENST00000515005 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
SMAD5-210ENST00000515005 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
SMAD5-210ENST00000515005 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
SMAD5-210ENST00000515005 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
SMAD5-210ENST00000515005 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
SMAD5-210ENST00000515005 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
SMAD5-210ENST00000515005 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
SMAD5-210ENST00000515005 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
SMAD5-210ENST00000515005 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
SMAD5-210ENST00000515005 TRHP20396 242 aaPredicted RBP23.8■■□□□ 1.4
SMAD5-210ENST00000515005 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
SMAD5-210ENST00000515005 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
SMAD5-210ENST00000515005 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
SMAD5-210ENST00000515005 CFTRP13569 1480 aa23.56■■□□□ 1.36
SMAD5-210ENST00000515005 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
SMAD5-210ENST00000515005 WIZO95785 1651 aa23.55■■□□□ 1.36
SMAD5-210ENST00000515005 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
SMAD5-210ENST00000515005 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
SMAD5-210ENST00000515005 CHD1O14646 1710 aa23.38■■□□□ 1.33
SMAD5-210ENST00000515005 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
SMAD5-210ENST00000515005 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
SMAD5-210ENST00000515005 FBLN2P98095 1184 aa23.26■■□□□ 1.31
SMAD5-210ENST00000515005 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
SMAD5-210ENST00000515005 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
SMAD5-210ENST00000515005 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMAD5-210ENST00000515005 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
SMAD5-210ENST00000515005 TARBP1Q13395 1621 aaKnown RBP23.1■■□□□ 1.29
SMAD5-210ENST00000515005 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
SMAD5-210ENST00000515005 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
SMAD5-210ENST00000515005 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
SMAD5-210ENST00000515005 ILDR1Q86SU0 546 aaPredicted RBP22.98■■□□□ 1.27
SMAD5-210ENST00000515005 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
SMAD5-210ENST00000515005 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
SMAD5-210ENST00000515005 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
SMAD5-210ENST00000515005 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
SMAD5-210ENST00000515005 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
SMAD5-210ENST00000515005 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
SMAD5-210ENST00000515005 GAPVD1Q14C86 1478 aa22.9■■□□□ 1.26
SMAD5-210ENST00000515005 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
SMAD5-210ENST00000515005 SOGA1O94964 1423 aa22.81■■□□□ 1.24
SMAD5-210ENST00000515005 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
SMAD5-210ENST00000515005 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
SMAD5-210ENST00000515005 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
SMAD5-210ENST00000515005 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
SMAD5-210ENST00000515005 ERCC6L2Q5T890 1561 aa22.69■■□□□ 1.22
SMAD5-210ENST00000515005 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
SMAD5-210ENST00000515005 KDM4FA0A1W2PPD8 638 aa22.65■■□□□ 1.22
SMAD5-210ENST00000515005 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
SMAD5-210ENST00000515005 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
SMAD5-210ENST00000515005 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
SMAD5-210ENST00000515005 CUX1P39880 1505 aa22.48■■□□□ 1.19
SMAD5-210ENST00000515005 FAM69CQ0P6D2 419 aa22.45■■□□□ 1.18
SMAD5-210ENST00000515005 GRIN2AQ12879 1464 aa22.41■■□□□ 1.18
SMAD5-210ENST00000515005 ABCC10Q5T3U5 1492 aa22.4■■□□□ 1.18
SMAD5-210ENST00000515005 SHROOM2Q13796 1616 aa22.39■■□□□ 1.18
SMAD5-210ENST00000515005 NUP160Q12769 1436 aa22.38■■□□□ 1.17
SMAD5-210ENST00000515005 KDM6BO15054 1643 aa22.38■■□□□ 1.17
SMAD5-210ENST00000515005 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
SMAD5-210ENST00000515005 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
SMAD5-210ENST00000515005 DIP2BQ9P265 1576 aa22.31■■□□□ 1.16
SMAD5-210ENST00000515005 ADAMTS12P58397 1594 aa22.28■■□□□ 1.16
SMAD5-210ENST00000515005 TSPOAP1O95153 1857 aa22.27■■□□□ 1.16
SMAD5-210ENST00000515005 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms