RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 LTKP29376 864 aa18.4■□□□□ 0.54
DDR1-271ENST00000513240 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
DDR1-271ENST00000513240 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
DDR1-271ENST00000513240 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
DDR1-271ENST00000513240 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
DDR1-271ENST00000513240 LTV1Q96GA3 475 aaPredicted RBP18.4■□□□□ 0.54
DDR1-271ENST00000513240 CCDC61Q9Y6R9 512 aa18.4■□□□□ 0.54
DDR1-271ENST00000513240 NLRP1Q9C000 1473 aa18.39■□□□□ 0.53
DDR1-271ENST00000513240 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
DDR1-271ENST00000513240 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
DDR1-271ENST00000513240 C22orf23Q9BZE7 217 aa18.39■□□□□ 0.53
DDR1-271ENST00000513240 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
DDR1-271ENST00000513240 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
DDR1-271ENST00000513240 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
DDR1-271ENST00000513240 PRDM4Q9UKN5 801 aa18.38■□□□□ 0.53
DDR1-271ENST00000513240 ZMYM3Q14202 1370 aa18.38■□□□□ 0.53
DDR1-271ENST00000513240 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
DDR1-271ENST00000513240 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
DDR1-271ENST00000513240 RICTORQ6R327 1708 aa18.37■□□□□ 0.53
DDR1-271ENST00000513240 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
DDR1-271ENST00000513240 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
DDR1-271ENST00000513240 CFAP74Q9C0B2 1584 aa18.37■□□□□ 0.53
DDR1-271ENST00000513240 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
DDR1-271ENST00000513240 FGD1P98174 961 aa18.36■□□□□ 0.53
DDR1-271ENST00000513240 BECN1Q14457 450 aa18.36■□□□□ 0.53
DDR1-271ENST00000513240 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
DDR1-271ENST00000513240 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
DDR1-271ENST00000513240 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
DDR1-271ENST00000513240 PREX1Q8TCU6 1659 aa18.35■□□□□ 0.53
DDR1-271ENST00000513240 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
DDR1-271ENST00000513240 ACEP12821 1306 aa18.35■□□□□ 0.53
DDR1-271ENST00000513240 ERBB4Q15303 1308 aa18.35■□□□□ 0.53
DDR1-271ENST00000513240 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
DDR1-271ENST00000513240 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
DDR1-271ENST00000513240 SMARCA5O60264 1052 aaPredicted RBP18.34■□□□□ 0.53
DDR1-271ENST00000513240 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
DDR1-271ENST00000513240 CHD1LQ86WJ1 897 aa18.33■□□□□ 0.53
DDR1-271ENST00000513240 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
DDR1-271ENST00000513240 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
DDR1-271ENST00000513240 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.52
DDR1-271ENST00000513240 ZFYVE9O95405 1425 aa18.33■□□□□ 0.52
DDR1-271ENST00000513240 F6X3S4 739 aa18.32■□□□□ 0.52
DDR1-271ENST00000513240 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
DDR1-271ENST00000513240 CPS1P31327 1500 aa18.32■□□□□ 0.52
DDR1-271ENST00000513240 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
DDR1-271ENST00000513240 LRRC7Q96NW7 1537 aa18.32■□□□□ 0.52
DDR1-271ENST00000513240 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
DDR1-271ENST00000513240 ESPNB1AK53 854 aa18.31■□□□□ 0.52
DDR1-271ENST00000513240 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
DDR1-271ENST00000513240 GNAI1P63096 354 aa18.31■□□□□ 0.52
DDR1-271ENST00000513240 SMC5Q8IY18 1101 aa18.31■□□□□ 0.52
DDR1-271ENST00000513240 NUCB1Q02818 461 aa18.3■□□□□ 0.52
DDR1-271ENST00000513240 CLTCQ00610 1675 aaKnown RBP18.3■□□□□ 0.52
DDR1-271ENST00000513240 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
DDR1-271ENST00000513240 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
DDR1-271ENST00000513240 USHBP1Q8N6Y0 703 aa18.29■□□□□ 0.52
DDR1-271ENST00000513240 TSHZ3Q63HK5 1081 aa18.28■□□□□ 0.52
DDR1-271ENST00000513240 IL16Q14005 1332 aa18.28■□□□□ 0.52
DDR1-271ENST00000513240 TTC21BQ7Z4L5 1316 aa18.28■□□□□ 0.52
DDR1-271ENST00000513240 CD2BP2O95400 341 aaKnown RBP18.28■□□□□ 0.52
DDR1-271ENST00000513240 G2E3Q7L622 706 aa18.28■□□□□ 0.52
DDR1-271ENST00000513240 ARID3AQ99856 593 aa18.28■□□□□ 0.52
DDR1-271ENST00000513240 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
DDR1-271ENST00000513240 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
DDR1-271ENST00000513240 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
DDR1-271ENST00000513240 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.51
DDR1-271ENST00000513240 PDE4CQ08493 712 aa18.26■□□□□ 0.51
DDR1-271ENST00000513240 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
DDR1-271ENST00000513240 IFT57Q9NWB7 429 aa18.26■□□□□ 0.51
DDR1-271ENST00000513240 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
DDR1-271ENST00000513240 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
DDR1-271ENST00000513240 ADGRB2O60241 1585 aa18.24■□□□□ 0.51
DDR1-271ENST00000513240 TPM2P07951 284 aa18.24■□□□□ 0.51
DDR1-271ENST00000513240 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
DDR1-271ENST00000513240 MEIS3Q99687 375 aa18.24■□□□□ 0.51
DDR1-271ENST00000513240 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
DDR1-271ENST00000513240 ZNF853P0CG23 659 aa18.24■□□□□ 0.51
DDR1-271ENST00000513240 AMPHP49418 695 aa18.24■□□□□ 0.51
DDR1-271ENST00000513240 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
DDR1-271ENST00000513240 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
DDR1-271ENST00000513240 USP32Q8NFA0 1604 aa18.23■□□□□ 0.51
DDR1-271ENST00000513240 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
DDR1-271ENST00000513240 TNRQ92752 1358 aa18.22■□□□□ 0.51
DDR1-271ENST00000513240 NLRP6P59044 892 aa18.22■□□□□ 0.51
DDR1-271ENST00000513240 XPCQ01831 940 aaPredicted RBP18.22■□□□□ 0.51
DDR1-271ENST00000513240 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
DDR1-271ENST00000513240 CPSF1Q10570 1443 aaKnown RBP18.21■□□□□ 0.51
DDR1-271ENST00000513240 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
DDR1-271ENST00000513240 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
DDR1-271ENST00000513240 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
DDR1-271ENST00000513240 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
DDR1-271ENST00000513240 HSCBQ8IWL3 235 aa18.2■□□□□ 0.5
DDR1-271ENST00000513240 TRIM44Q96DX7 344 aaPredicted RBP18.2■□□□□ 0.5
DDR1-271ENST00000513240 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
DDR1-271ENST00000513240 GSPT1P15170 499 aaKnown RBP18.19■□□□□ 0.5
DDR1-271ENST00000513240 ZHX1Q9UKY1 873 aaPredicted RBP18.19■□□□□ 0.5
DDR1-271ENST00000513240 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
DDR1-271ENST00000513240 MED14O60244 1454 aa18.19■□□□□ 0.5
DDR1-271ENST00000513240 MRE11P49959 708 aa18.18■□□□□ 0.5
DDR1-271ENST00000513240 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms