RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 PRPF38BQ5VTL8 546 aaKnown RBP5.91□□□□□ -1.46
HMGN1P11-201ENST00000508668 SPSB2Q99619 263 aa5.91□□□□□ -1.46
HMGN1P11-201ENST00000508668 ATP10AO60312 1499 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 ZNF518AQ6AHZ1 1483 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 ARHGEF40Q8TER5 1519 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 RFC5P40937 340 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 KCNC4Q03721 635 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 BRICD5Q6PL45 260 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 RETREG3Q86VR2 466 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 PRR7Q8TB68 274 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 THAP11Q96EK4 314 aa5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 USB1Q9BQ65 265 aaKnown RBP5.9□□□□□ -1.46
HMGN1P11-201ENST00000508668 MYO5CQ9NQX4 1742 aa5.9□□□□□ -1.47
HMGN1P11-201ENST00000508668 TROQ12816 1431 aaPredicted RBP5.9□□□□□ -1.47
HMGN1P11-201ENST00000508668 C9orf84Q5VXU9 1444 aa5.9□□□□□ -1.47
HMGN1P11-201ENST00000508668 MADDQ8WXG6 1647 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 RIMS1Q86UR5 1692 aaKnown RBP5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 BCORL1Q5H9F3 1711 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 SPDYE5A6NIY4 337 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 CFAP99D6REC4 459 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 HSPA2P54652 639 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 Q6ZNB5 142 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 AFAP1Q8N556 730 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 NKX2-3Q8TAU0 364 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 CFDP1Q9UEE9 299 aaPredicted RBP5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 SALL2Q9Y467 1007 aaPredicted RBP5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 GTF3C3Q9Y5Q9 886 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 MTUS2Q5JR59 1369 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 PCF11O94913 1555 aaKnown RBP5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 TTC37Q6PGP7 1564 aa5.89□□□□□ -1.47
HMGN1P11-201ENST00000508668 ITGBL1O95965 494 aaPredicted RBP5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 ADH1BP00325 375 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 PPP2R2DQ66LE6 453 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 PRDM9Q9NQV7 894 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 SPAG9O60271 1321 aaKnown RBP5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 CCNB3Q8WWL7 1395 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 UHRF1BP1Q6BDS2 1440 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 ADAMTSL3P82987 1691 aa5.88□□□□□ -1.47
HMGN1P11-201ENST00000508668 AP1G2O75843 785 aa5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 FAM160A2Q8N612 972 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 HELBQ8NG08 1087 aaPredicted RBP5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 SLC6A16Q9GZN6 736 aa5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 CASKIN1Q8WXD9 1431 aa5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 ARHGAP35Q9NRY4 1499 aa5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 ZMYM4Q5VZL5 1548 aa5.87□□□□□ -1.47
HMGN1P11-201ENST00000508668 FER1L4A9Z1Z3 1794 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 RICTORQ6R327 1708 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 PLEKHH2Q8IVE3 1493 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 YEATS2Q9ULM3 1422 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 S1PR4O95977 384 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 CEBPAP49715 358 aaPredicted RBP5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 MSS51Q4VC12 460 aa5.86□□□□□ -1.47
HMGN1P11-201ENST00000508668 FRMPD1Q5SYB0 1578 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 FYCO1Q9BQS8 1478 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 CNTLNQ9NXG0 1405 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 TSPY4P0CV99 314 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 TSPY10P0CW01 314 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 JUNDP17535 347 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 CTDSPL2Q05D32 466 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 TMEM259Q4ZIN3 620 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 GGT6Q6P531 493 aa5.85□□□□□ -1.47
HMGN1P11-201ENST00000508668 LMTK3Q96Q04 1460 aa5.84□□□□□ -1.47
HMGN1P11-201ENST00000508668 PER1O15534 1290 aaPredicted RBP5.84□□□□□ -1.47
HMGN1P11-201ENST00000508668 USP17L8P0C7I0 530 aa5.84□□□□□ -1.47
HMGN1P11-201ENST00000508668 HNRNPMP52272 730 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGN1P11-201ENST00000508668 PPEF1O14829 653 aaPredicted RBP5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 DXOO77932 396 aaKnown RBP5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 DESI1Q6ICB0 168 aa5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 CCDC24Q8N4L8 307 aa5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 LRRN4Q8WUT4 740 aa5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 MLH3Q9UHC1 1453 aa5.83□□□□□ -1.48
HMGN1P11-201ENST00000508668 PREX1Q8TCU6 1659 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 A0A0G2JS52 829 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 MMP16P51512 607 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 PPP1R18Q6NYC8 613 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 NUDT12Q9BQG2 462 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 SNRKQ9NRH2 765 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 TRAPPC8Q9Y2L5 1435 aa5.82□□□□□ -1.48
HMGN1P11-201ENST00000508668 PREX2Q70Z35 1606 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 WASHC2CQ9Y4E1 1318 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 ARHGEF12Q9NZN5 1544 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 CTHP32929 405 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 GGCXP38435 758 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 PTPRNQ16849 979 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 IFFO2Q5TF58 517 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 LYPD8Q6UX82 237 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 BANK1Q8NDB2 785 aa5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 HMX1Q9NP08 348 aaPredicted RBP5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 FCF1Q9Y324 198 aaKnown RBP5.81□□□□□ -1.48
HMGN1P11-201ENST00000508668 ABCC1P33527 1531 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 CCNYL3P0C7X3 344 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 MCM6Q14566 821 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 KDM5CP41229 1560 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 ZMYM3Q14202 1370 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 DISP3Q9P2K9 1392 aa5.8□□□□□ -1.48
HMGN1P11-201ENST00000508668 SYCP2Q9BX26 1530 aa5.79□□□□□ -1.48
HMGN1P11-201ENST00000508668 A2MP01023 1474 aa5.79□□□□□ -1.48
HMGN1P11-201ENST00000508668 KIF3BO15066 747 aa5.79□□□□□ -1.48
HMGN1P11-201ENST00000508668 FLIIQ13045 1269 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms