RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
DDR1-262ENST00000508312 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.1
DDR1-262ENST00000508312 PLEKHF1Q96S99 279 aa15.71■□□□□ 0.1
DDR1-262ENST00000508312 SHPRHQ149N8 1683 aa15.71■□□□□ 0.1
DDR1-262ENST00000508312 PPLO60437 1756 aa15.7■□□□□ 0.1
DDR1-262ENST00000508312 TMEM57Q8N5G2 664 aa15.7■□□□□ 0.1
DDR1-262ENST00000508312 BBXQ8WY36 941 aaPredicted RBP15.7■□□□□ 0.1
DDR1-262ENST00000508312 CFAP74Q9C0B2 1584 aa15.7■□□□□ 0.1
DDR1-262ENST00000508312 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
DDR1-262ENST00000508312 KIAA1210Q9ULL0 1709 aa15.7■□□□□ 0.1
DDR1-262ENST00000508312 DYNC1I1O14576 645 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 MCTP1Q6DN14 999 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 NEXMIFQ5QGS0 1516 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
DDR1-262ENST00000508312 HDGFL2Q7Z4V5 671 aaPredicted RBP15.69■□□□□ 0.1
DDR1-262ENST00000508312 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
DDR1-262ENST00000508312 SLC52A1Q9NWF4 448 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
DDR1-262ENST00000508312 LMTK2Q8IWU2 1503 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 PTMAP06454 111 aaKnown RBP15.69■□□□□ 0.1
DDR1-262ENST00000508312 SMC5Q8IY18 1101 aa15.69■□□□□ 0.1
DDR1-262ENST00000508312 CBX1P83916 185 aa15.68■□□□□ 0.1
DDR1-262ENST00000508312 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
DDR1-262ENST00000508312 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
DDR1-262ENST00000508312 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
DDR1-262ENST00000508312 CSPP1Q1MSJ5 1256 aa15.67■□□□□ 0.1
DDR1-262ENST00000508312 TSC1Q92574 1164 aa15.67■□□□□ 0.1
DDR1-262ENST00000508312 MYO5BQ9ULV0 1848 aa15.67■□□□□ 0.1
DDR1-262ENST00000508312 DIP2CQ9Y2E4 1556 aa15.67■□□□□ 0.1
DDR1-262ENST00000508312 IQSEC2Q5JU85 1478 aa15.67■□□□□ 0.1
DDR1-262ENST00000508312 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
DDR1-262ENST00000508312 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 APBB1O00213 710 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
DDR1-262ENST00000508312 KLHL40Q2TBA0 621 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
DDR1-262ENST00000508312 RBSNQ9H1K0 784 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 DDIT3P35638 169 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 SASS6Q6UVJ0 657 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 MPNDQ8N594 471 aa15.66■□□□□ 0.1
DDR1-262ENST00000508312 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
DDR1-262ENST00000508312 TSPOAP1O95153 1857 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 ZNF500O60304 480 aaPredicted RBP15.65■□□□□ 0.1
DDR1-262ENST00000508312 BAG4O95429 457 aaKnown RBP15.65■□□□□ 0.1
DDR1-262ENST00000508312 DMTNQ08495 405 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 ATAD2Q6PL18 1390 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 RNF214Q8ND24 703 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 ZKSCAN5Q9Y2L8 839 aa15.65■□□□□ 0.1
DDR1-262ENST00000508312 ZSCAN23Q3MJ62 389 aa15.64■□□□□ 0.09
DDR1-262ENST00000508312 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
DDR1-262ENST00000508312 NEO1Q92859 1461 aa15.64■□□□□ 0.09
DDR1-262ENST00000508312 SNX21Q969T3 373 aa15.64■□□□□ 0.09
DDR1-262ENST00000508312 K7ELQ4 463 aaPredicted RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 CEBPAP49715 358 aaPredicted RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 AEBP1Q8IUX7 1158 aa15.63■□□□□ 0.09
DDR1-262ENST00000508312 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
DDR1-262ENST00000508312 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
DDR1-262ENST00000508312 RBM27Q9P2N5 1060 aaKnown RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
DDR1-262ENST00000508312 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
DDR1-262ENST00000508312 FAM177BA6PVY3 158 aa15.62■□□□□ 0.09
DDR1-262ENST00000508312 MYO3AQ8NEV4 1616 aa15.62■□□□□ 0.09
DDR1-262ENST00000508312 PTPRMP28827 1452 aa15.62■□□□□ 0.09
DDR1-262ENST00000508312 CD163L1Q9NR16 1453 aa15.62■□□□□ 0.09
DDR1-262ENST00000508312 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
DDR1-262ENST00000508312 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
DDR1-262ENST00000508312 HS1BP3Q53T59 392 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 ESF1Q9H501 851 aaKnown RBP15.61■□□□□ 0.09
DDR1-262ENST00000508312 RBM25P49756 843 aaKnown RBP15.61■□□□□ 0.09
DDR1-262ENST00000508312 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 SLC26A8Q96RN1 970 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 MIS18AQ9NYP9 233 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 METP08581 1390 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 ZMYM3Q14202 1370 aa15.61■□□□□ 0.09
DDR1-262ENST00000508312 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
DDR1-262ENST00000508312 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
DDR1-262ENST00000508312 IGSF3O75054 1194 aa15.6■□□□□ 0.09
DDR1-262ENST00000508312 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
DDR1-262ENST00000508312 PRPF40AO75400 957 aaKnown RBP15.59■□□□□ 0.09
DDR1-262ENST00000508312 PPP4R3BQ5MIZ7 849 aa15.59■□□□□ 0.09
DDR1-262ENST00000508312 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
DDR1-262ENST00000508312 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
DDR1-262ENST00000508312 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
DDR1-262ENST00000508312 FOXD4L5Q5VV16 416 aaPredicted RBP15.59■□□□□ 0.09
DDR1-262ENST00000508312 FOXD4L4Q8WXT5 416 aaPredicted RBP15.59■□□□□ 0.09
DDR1-262ENST00000508312 NUTM2GQ5VZR2 741 aa15.58■□□□□ 0.08
DDR1-262ENST00000508312 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
DDR1-262ENST00000508312 ZNF445P59923 1031 aa15.58■□□□□ 0.08
DDR1-262ENST00000508312 NGEFQ8N5V2 710 aa15.58■□□□□ 0.08
DDR1-262ENST00000508312 SYCE3A1L190 88 aa15.57■□□□□ 0.08
DDR1-262ENST00000508312 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
DDR1-262ENST00000508312 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
DDR1-262ENST00000508312 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms