RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 VAMP4O75379 141 aa24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 IL13P35225 146 aa24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 CALD1Q05682 793 aaKnown RBP24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 EIF5BO60841 1220 aaKnown RBP24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 SPRYD3Q8NCJ5 442 aa24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
NKX2-1-202ENST00000498187 CDK12Q9NYV4 1490 aaPredicted RBP24.74■■□□□ 1.55
NKX2-1-202ENST00000498187 LNPKQ9C0E8 428 aa24.74■■□□□ 1.55
NKX2-1-202ENST00000498187 ZRANB1Q9UGI0 708 aa24.74■■□□□ 1.55
NKX2-1-202ENST00000498187 MRPL50Q8N5N7 158 aaKnown RBP24.74■■□□□ 1.55
NKX2-1-202ENST00000498187 GNAI1P63096 354 aa24.73■■□□□ 1.55
NKX2-1-202ENST00000498187 TSPYL6Q8N831 410 aa24.73■■□□□ 1.55
NKX2-1-202ENST00000498187 FSD2A1L4K1 749 aa24.73■■□□□ 1.55
NKX2-1-202ENST00000498187 MLECQ14165 292 aa24.73■■□□□ 1.55
NKX2-1-202ENST00000498187 IFT57Q9NWB7 429 aa24.73■■□□□ 1.55
NKX2-1-202ENST00000498187 CHD1LQ86WJ1 897 aa24.72■■□□□ 1.55
NKX2-1-202ENST00000498187 HSCBQ8IWL3 235 aa24.72■■□□□ 1.55
NKX2-1-202ENST00000498187 PTCH1Q13635 1447 aa24.72■■□□□ 1.55
NKX2-1-202ENST00000498187 ZBTB7BO15156 539 aaPredicted RBP24.71■■□□□ 1.55
NKX2-1-202ENST00000498187 ARHGAP45Q92619 1136 aa24.71■■□□□ 1.55
NKX2-1-202ENST00000498187 MBIPQ9NS73 344 aa24.71■■□□□ 1.55
NKX2-1-202ENST00000498187 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
NKX2-1-202ENST00000498187 METP08581 1390 aa24.71■■□□□ 1.55
NKX2-1-202ENST00000498187 XRCC6P12956 609 aaKnown RBP eCLIP24.7■■□□□ 1.55
NKX2-1-202ENST00000498187 AATKQ6ZMQ8 1374 aa24.7■■□□□ 1.55
NKX2-1-202ENST00000498187 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.7■■□□□ 1.54
NKX2-1-202ENST00000498187 PIK3R4Q99570 1358 aa24.7■■□□□ 1.54
NKX2-1-202ENST00000498187 ELL2O00472 640 aaPredicted RBP24.69■■□□□ 1.54
NKX2-1-202ENST00000498187 ZNF853P0CG23 659 aa24.69■■□□□ 1.54
NKX2-1-202ENST00000498187 TXNDC2Q86VQ3 553 aa24.69■■□□□ 1.54
NKX2-1-202ENST00000498187 NUDT16Q96DE0 195 aaKnown RBP24.69■■□□□ 1.54
NKX2-1-202ENST00000498187 CPS1P31327 1500 aa24.69■■□□□ 1.54
NKX2-1-202ENST00000498187 MON2Q7Z3U7 1717 aa24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 TRAK2O60296 914 aa24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 C1orf115Q9H7X2 142 aa24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 NCKAP5LQ9HCH0 1330 aa24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 COG3Q96JB2 828 aa24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 CHMP4BQ9H444 224 aaKnown RBP24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 RRAGDQ9NQL2 400 aaPredicted RBP24.68■■□□□ 1.54
NKX2-1-202ENST00000498187 RRS1Q15050 365 aaKnown RBP24.67■■□□□ 1.54
NKX2-1-202ENST00000498187 DDX11L8A8MPP1 907 aa24.66■■□□□ 1.54
NKX2-1-202ENST00000498187 TWISTNBQ3B726 338 aaPredicted RBP24.66■■□□□ 1.54
NKX2-1-202ENST00000498187 GCC1Q96CN9 775 aa24.66■■□□□ 1.54
NKX2-1-202ENST00000498187 ABCC4O15439 1325 aa24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 RBM25P49756 843 aaKnown RBP24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 LMOD3Q0VAK6 560 aa24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 GZF1Q9H116 711 aaPredicted RBP24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
NKX2-1-202ENST00000498187 CFAP44Q96MT7 982 aa24.64■■□□□ 1.54
NKX2-1-202ENST00000498187 CCDC61Q9Y6R9 512 aa24.64■■□□□ 1.54
NKX2-1-202ENST00000498187 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.54
NKX2-1-202ENST00000498187 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.53
NKX2-1-202ENST00000498187 AKAP12Q02952 1782 aa24.64■■□□□ 1.53
NKX2-1-202ENST00000498187 BMP2KLQ5H9B9 411 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 C8orf58Q8NAV2 365 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 SNX21Q969T3 373 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 ITSN1Q15811 1721 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 C3P01024 1663 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 MRE11P49959 708 aa24.63■■□□□ 1.53
NKX2-1-202ENST00000498187 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
NKX2-1-202ENST00000498187 ARXQ96QS3 562 aa24.62■■□□□ 1.53
NKX2-1-202ENST00000498187 ZNF692Q9BU19 519 aaPredicted RBP24.61■■□□□ 1.53
NKX2-1-202ENST00000498187 ISY1Q9ULR0 285 aaKnown RBP24.61■■□□□ 1.53
NKX2-1-202ENST00000498187 SIRT2Q8IXJ6 389 aa24.61■■□□□ 1.53
NKX2-1-202ENST00000498187 SIRT1Q96EB6 747 aa24.61■■□□□ 1.53
NKX2-1-202ENST00000498187 TECPR2O15040 1411 aa24.6■■□□□ 1.53
NKX2-1-202ENST00000498187 NCOA3Q9Y6Q9 1424 aa24.6■■□□□ 1.53
NKX2-1-202ENST00000498187 DCTN1Q14203 1278 aa24.6■■□□□ 1.53
NKX2-1-202ENST00000498187 DDIT3P35638 169 aa24.58■■□□□ 1.53
NKX2-1-202ENST00000498187 API5Q9BZZ5 524 aaKnown RBP24.58■■□□□ 1.53
NKX2-1-202ENST00000498187 CIZ1Q9ULV3 898 aaPredicted RBP24.58■■□□□ 1.53
NKX2-1-202ENST00000498187 TNRQ92752 1358 aa24.58■■□□□ 1.52
NKX2-1-202ENST00000498187 PRR36Q9H6K5 1346 aa24.57■■□□□ 1.52
NKX2-1-202ENST00000498187 PANK2Q9BZ23 570 aa24.56■■□□□ 1.52
NKX2-1-202ENST00000498187 NRKQ7Z2Y5 1582 aa24.56■■□□□ 1.52
NKX2-1-202ENST00000498187 CLCN1P35523 988 aa24.53■■□□□ 1.52
NKX2-1-202ENST00000498187 AEBP1Q8IUX7 1158 aa24.53■■□□□ 1.52
NKX2-1-202ENST00000498187 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
NKX2-1-202ENST00000498187 UBE2Q2Q8WVN8 375 aa24.53■■□□□ 1.52
NKX2-1-202ENST00000498187 GBP4Q96PP9 640 aa24.53■■□□□ 1.52
NKX2-1-202ENST00000498187 PTMSP20962 102 aa24.52■■□□□ 1.52
NKX2-1-202ENST00000498187 TBC1D9Q6ZT07 1266 aa24.52■■□□□ 1.52
NKX2-1-202ENST00000498187 GRPEL1Q9HAV7 217 aa24.52■■□□□ 1.52
NKX2-1-202ENST00000498187 EIF4A2Q14240 407 aaKnown RBP24.52■■□□□ 1.52
NKX2-1-202ENST00000498187 UBR1Q8IWV7 1749 aa24.52■■□□□ 1.52
NKX2-1-202ENST00000498187 SULT6B1Q6IMI4 303 aa24.51■■□□□ 1.51
NKX2-1-202ENST00000498187 KIF24Q5T7B8 1368 aa24.51■■□□□ 1.51
NKX2-1-202ENST00000498187 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
NKX2-1-202ENST00000498187 TMEM2Q9UHN6 1383 aa24.5■■□□□ 1.51
NKX2-1-202ENST00000498187 TNPO1Q92973 898 aaKnown RBP24.5■■□□□ 1.51
NKX2-1-202ENST00000498187 KIF2CQ99661 725 aa24.5■■□□□ 1.51
NKX2-1-202ENST00000498187 SKOR2Q2VWA4 1001 aaPredicted RBP24.5■■□□□ 1.51
NKX2-1-202ENST00000498187 TTC21BQ7Z4L5 1316 aa24.49■■□□□ 1.51
NKX2-1-202ENST00000498187 RAB3GAP1Q15042 981 aa24.48■■□□□ 1.51
NKX2-1-202ENST00000498187 KRT24Q2M2I5 525 aa24.47■■□□□ 1.51
NKX2-1-202ENST00000498187 INTS3Q68E01 1043 aaKnown RBP24.46■■□□□ 1.51
NKX2-1-202ENST00000498187 HSP90AA1P07900 732 aaKnown RBP24.46■■□□□ 1.51
NKX2-1-202ENST00000498187 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.46■■□□□ 1.51
NKX2-1-202ENST00000498187 OVOS2A0A0J9YW53 1432 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms