RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 LCE2BO14633 110 aa12.56□□□□□ -0.4
VPS45-210ENST00000497638 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
VPS45-210ENST00000497638 LIAT1Q6ZQX7 453 aa12.56□□□□□ -0.4
VPS45-210ENST00000497638 ZNF598Q86UK7 904 aaKnown RBP12.56□□□□□ -0.4
VPS45-210ENST00000497638 CLTCQ00610 1675 aaKnown RBP12.56□□□□□ -0.4
VPS45-210ENST00000497638 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
VPS45-210ENST00000497638 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
VPS45-210ENST00000497638 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
VPS45-210ENST00000497638 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
VPS45-210ENST00000497638 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
VPS45-210ENST00000497638 SLC27A5Q9Y2P5 690 aa12.54□□□□□ -0.4
VPS45-210ENST00000497638 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
VPS45-210ENST00000497638 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
VPS45-210ENST00000497638 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
VPS45-210ENST00000497638 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
VPS45-210ENST00000497638 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
VPS45-210ENST00000497638 ATP7AQ04656 1500 aa12.52□□□□□ -0.4
VPS45-210ENST00000497638 IRF6O14896 467 aa12.52□□□□□ -0.41
VPS45-210ENST00000497638 SHANK2Q9UPX8 1470 aa12.52□□□□□ -0.41
VPS45-210ENST00000497638 SYCP2Q9BX26 1530 aa12.52□□□□□ -0.41
VPS45-210ENST00000497638 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
VPS45-210ENST00000497638 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
VPS45-210ENST00000497638 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
VPS45-210ENST00000497638 A2MP01023 1474 aa12.51□□□□□ -0.41
VPS45-210ENST00000497638 INO80Q9ULG1 1556 aaPredicted RBP12.51□□□□□ -0.41
VPS45-210ENST00000497638 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
VPS45-210ENST00000497638 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
VPS45-210ENST00000497638 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
VPS45-210ENST00000497638 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
VPS45-210ENST00000497638 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
VPS45-210ENST00000497638 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
VPS45-210ENST00000497638 KIAA1107Q9UPP5 1409 aa12.48□□□□□ -0.41
VPS45-210ENST00000497638 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
VPS45-210ENST00000497638 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
VPS45-210ENST00000497638 CASKIN1Q8WXD9 1431 aa12.47□□□□□ -0.41
VPS45-210ENST00000497638 GGT6Q6P531 493 aa12.47□□□□□ -0.41
VPS45-210ENST00000497638 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
VPS45-210ENST00000497638 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
VPS45-210ENST00000497638 ADGBQ8N7X0 1667 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 TNFRSF10AO00220 468 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 CD46P15529 392 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 PRR20EP86478 221 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 PRR20CP86479 221 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 PRR20DP86480 221 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 PRR20BP86481 221 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 PRR20AP86496 221 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 FAM160A2Q8N612 972 aaPredicted RBP12.46□□□□□ -0.41
VPS45-210ENST00000497638 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
VPS45-210ENST00000497638 ALKQ9UM73 1620 aa12.46□□□□□ -0.41
VPS45-210ENST00000497638 VWDEQ8N2E2 1590 aa12.46□□□□□ -0.42
VPS45-210ENST00000497638 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
VPS45-210ENST00000497638 GPATCH8Q9UKJ3 1502 aaKnown RBP12.45□□□□□ -0.42
VPS45-210ENST00000497638 TNRQ92752 1358 aa12.44□□□□□ -0.42
VPS45-210ENST00000497638 FAM135AQ9P2D6 1515 aa12.44□□□□□ -0.42
VPS45-210ENST00000497638 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS45-210ENST00000497638 RNF19BQ6ZMZ0 732 aa12.44□□□□□ -0.42
VPS45-210ENST00000497638 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
VPS45-210ENST00000497638 GDF9O60383 454 aa12.43□□□□□ -0.42
VPS45-210ENST00000497638 KDM4AO75164 1064 aa12.43□□□□□ -0.42
VPS45-210ENST00000497638 FOXC1Q12948 553 aa12.43□□□□□ -0.42
VPS45-210ENST00000497638 ANKLE2Q86XL3 938 aa12.43□□□□□ -0.42
VPS45-210ENST00000497638 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
VPS45-210ENST00000497638 MED14O60244 1454 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 PZPP20742 1482 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 FYCO1Q9BQS8 1478 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 DEPDC5O75140 1603 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 RNF17Q9BXT8 1623 aaKnown RBP12.42□□□□□ -0.42
VPS45-210ENST00000497638 DGAT1O75907 488 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 RPIAP49247 311 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 Q3C1V9 767 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 ZNF787Q6DD87 383 aa12.42□□□□□ -0.42
VPS45-210ENST00000497638 KRI1Q8N9T8 703 aaKnown RBP12.42□□□□□ -0.42
VPS45-210ENST00000497638 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
VPS45-210ENST00000497638 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
VPS45-210ENST00000497638 SYNMO15061 1565 aa12.41□□□□□ -0.42
VPS45-210ENST00000497638 CD2BP2O95400 341 aaKnown RBP12.41□□□□□ -0.42
VPS45-210ENST00000497638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS45-210ENST00000497638 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
VPS45-210ENST00000497638 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
VPS45-210ENST00000497638 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
VPS45-210ENST00000497638 THEMISQ8N1K5 641 aaPredicted RBP12.4□□□□□ -0.42
VPS45-210ENST00000497638 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
VPS45-210ENST00000497638 KDM5DQ9BY66 1539 aa12.4□□□□□ -0.42
VPS45-210ENST00000497638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS45-210ENST00000497638 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
VPS45-210ENST00000497638 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 RTEL1-TNFRSF6BF6WH68 1400 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 LRRC7Q96NW7 1537 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 CLCN1P35523 988 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 UGGT1Q9NYU2 1555 aa12.38□□□□□ -0.43
VPS45-210ENST00000497638 USP46P62068 366 aa12.37□□□□□ -0.43
VPS45-210ENST00000497638 MYT1Q01538 1121 aa12.37□□□□□ -0.43
VPS45-210ENST00000497638 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
VPS45-210ENST00000497638 DHX29Q7Z478 1369 aaKnown RBP12.37□□□□□ -0.43
VPS45-210ENST00000497638 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
VPS45-210ENST00000497638 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
VPS45-210ENST00000497638 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
VPS45-210ENST00000497638 USB1Q9BQ65 265 aaKnown RBP12.35□□□□□ -0.43
VPS45-210ENST00000497638 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms