RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 BOLA1Q9Y3E2 137 aa17.55■□□□□ 0.4
UPF3A-210ENST00000493727 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
UPF3A-210ENST00000493727 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
UPF3A-210ENST00000493727 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
UPF3A-210ENST00000493727 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-210ENST00000493727 ABCA3Q99758 1704 aa17.54■□□□□ 0.4
UPF3A-210ENST00000493727 RGPD8O14715 1765 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-210ENST00000493727 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
UPF3A-210ENST00000493727 BLMP54132 1417 aaPredicted RBP17.53■□□□□ 0.4
UPF3A-210ENST00000493727 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.4
UPF3A-210ENST00000493727 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
UPF3A-210ENST00000493727 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
UPF3A-210ENST00000493727 CLSPNQ9HAW4 1339 aa17.51■□□□□ 0.39
UPF3A-210ENST00000493727 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
UPF3A-210ENST00000493727 MICALL2Q8IY33 904 aa17.51■□□□□ 0.39
UPF3A-210ENST00000493727 STK26Q9P289 416 aa17.51■□□□□ 0.39
UPF3A-210ENST00000493727 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
UPF3A-210ENST00000493727 LHX8Q68G74 356 aa17.5■□□□□ 0.39
UPF3A-210ENST00000493727 YTHDC2Q9H6S0 1430 aaKnown RBP17.49■□□□□ 0.39
UPF3A-210ENST00000493727 SIRT1Q96EB6 747 aa17.49■□□□□ 0.39
UPF3A-210ENST00000493727 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
UPF3A-210ENST00000493727 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
UPF3A-210ENST00000493727 LRP5O75197 1615 aa17.47■□□□□ 0.39
UPF3A-210ENST00000493727 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
UPF3A-210ENST00000493727 C14orf93Q9H972 538 aaKnown RBP17.47■□□□□ 0.39
UPF3A-210ENST00000493727 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
UPF3A-210ENST00000493727 G3V3G9 751 aa17.44■□□□□ 0.38
UPF3A-210ENST00000493727 NEUROD1Q13562 356 aa17.44■□□□□ 0.38
UPF3A-210ENST00000493727 KRT28Q7Z3Y7 464 aa17.44■□□□□ 0.38
UPF3A-210ENST00000493727 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
UPF3A-210ENST00000493727 VPS72Q15906 364 aa17.43■□□□□ 0.38
UPF3A-210ENST00000493727 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
UPF3A-210ENST00000493727 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
UPF3A-210ENST00000493727 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
UPF3A-210ENST00000493727 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
UPF3A-210ENST00000493727 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
UPF3A-210ENST00000493727 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
UPF3A-210ENST00000493727 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
UPF3A-210ENST00000493727 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
UPF3A-210ENST00000493727 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
UPF3A-210ENST00000493727 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
UPF3A-210ENST00000493727 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.37
UPF3A-210ENST00000493727 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
UPF3A-210ENST00000493727 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
UPF3A-210ENST00000493727 MAMSTRQ6ZN01 415 aa17.38■□□□□ 0.37
UPF3A-210ENST00000493727 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
UPF3A-210ENST00000493727 PSME1Q06323 249 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 KRT27Q7Z3Y8 459 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 POGKQ9P215 609 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 TONSLQ96HA7 1378 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
UPF3A-210ENST00000493727 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
UPF3A-210ENST00000493727 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-210ENST00000493727 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
UPF3A-210ENST00000493727 C3orf67Q6ZVT6 689 aa17.35■□□□□ 0.37
UPF3A-210ENST00000493727 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
UPF3A-210ENST00000493727 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
UPF3A-210ENST00000493727 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
UPF3A-210ENST00000493727 SCUBE2Q9NQ36 999 aa17.34■□□□□ 0.37
UPF3A-210ENST00000493727 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
UPF3A-210ENST00000493727 THSD7AQ9UPZ6 1657 aa17.34■□□□□ 0.37
UPF3A-210ENST00000493727 TNS1Q9HBL0 1735 aaKnown RBP17.33■□□□□ 0.37
UPF3A-210ENST00000493727 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
UPF3A-210ENST00000493727 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
UPF3A-210ENST00000493727 SAFB2Q14151 953 aaKnown RBP eCLIP17.32■□□□□ 0.36
UPF3A-210ENST00000493727 TMEM92Q6UXU6 159 aa17.32■□□□□ 0.36
UPF3A-210ENST00000493727 DCAF11Q8TEB1 546 aa17.31■□□□□ 0.36
UPF3A-210ENST00000493727 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
UPF3A-210ENST00000493727 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
UPF3A-210ENST00000493727 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
UPF3A-210ENST00000493727 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
UPF3A-210ENST00000493727 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
UPF3A-210ENST00000493727 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
UPF3A-210ENST00000493727 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
UPF3A-210ENST00000493727 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
UPF3A-210ENST00000493727 BAG6P46379 1132 aa17.28■□□□□ 0.36
UPF3A-210ENST00000493727 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
UPF3A-210ENST00000493727 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
UPF3A-210ENST00000493727 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.36
UPF3A-210ENST00000493727 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
UPF3A-210ENST00000493727 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
UPF3A-210ENST00000493727 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
UPF3A-210ENST00000493727 ITSN1Q15811 1721 aa17.26■□□□□ 0.35
UPF3A-210ENST00000493727 ARHGEF28Q8N1W1 1705 aaKnown RBP17.26■□□□□ 0.35
UPF3A-210ENST00000493727 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
UPF3A-210ENST00000493727 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
UPF3A-210ENST00000493727 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
UPF3A-210ENST00000493727 KIF3CO14782 793 aa17.25■□□□□ 0.35
UPF3A-210ENST00000493727 L3MBTL2Q969R5 705 aa17.25■□□□□ 0.35
UPF3A-210ENST00000493727 MINK1Q8N4C8 1332 aaPredicted RBP17.24■□□□□ 0.35
UPF3A-210ENST00000493727 A0A0G2JS52 829 aa17.24■□□□□ 0.35
UPF3A-210ENST00000493727 MYT1Q01538 1121 aa17.24■□□□□ 0.35
UPF3A-210ENST00000493727 CRISPLD2Q9H0B8 497 aa17.24■□□□□ 0.35
UPF3A-210ENST00000493727 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-210ENST00000493727 EN1Q05925 392 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-210ENST00000493727 HIRIP3Q9BW71 556 aaPredicted RBP17.23■□□□□ 0.35
UPF3A-210ENST00000493727 ATP7BP35670 1465 aa17.23■□□□□ 0.35
UPF3A-210ENST00000493727 SLAIN1Q8ND83 568 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms