RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 LRRC7Q96NW7 1537 aa10.35□□□□□ -0.75
SCMH1-216ENST00000489421 OSBPP22059 807 aa10.35□□□□□ -0.75
SCMH1-216ENST00000489421 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
SCMH1-216ENST00000489421 TRIM6-TRIM34B2RNG4 842 aa10.34□□□□□ -0.75
SCMH1-216ENST00000489421 LTKP29376 864 aa10.34□□□□□ -0.75
SCMH1-216ENST00000489421 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
SCMH1-216ENST00000489421 KANK1Q14678 1352 aa10.34□□□□□ -0.75
SCMH1-216ENST00000489421 ZFYVE9O95405 1425 aa10.33□□□□□ -0.76
SCMH1-216ENST00000489421 IFT172Q9UG01 1749 aa10.33□□□□□ -0.76
SCMH1-216ENST00000489421 THEMISQ8N1K5 641 aaPredicted RBP10.33□□□□□ -0.76
SCMH1-216ENST00000489421 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
SCMH1-216ENST00000489421 WNT2BQ93097 391 aa10.33□□□□□ -0.76
SCMH1-216ENST00000489421 PPLO60437 1756 aa10.33□□□□□ -0.76
SCMH1-216ENST00000489421 TMEM2Q9UHN6 1383 aa10.32□□□□□ -0.76
SCMH1-216ENST00000489421 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
SCMH1-216ENST00000489421 PTPN5P54829 565 aa10.32□□□□□ -0.76
SCMH1-216ENST00000489421 NEUROD1Q13562 356 aa10.32□□□□□ -0.76
SCMH1-216ENST00000489421 IDI1Q13907 227 aa10.32□□□□□ -0.76
SCMH1-216ENST00000489421 CDHR5Q9HBB8 845 aa10.32□□□□□ -0.76
SCMH1-216ENST00000489421 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
SCMH1-216ENST00000489421 ANKLE2Q86XL3 938 aa10.31□□□□□ -0.76
SCMH1-216ENST00000489421 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
SCMH1-216ENST00000489421 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
SCMH1-216ENST00000489421 XRN1Q8IZH2 1706 aaKnown RBP10.3□□□□□ -0.76
SCMH1-216ENST00000489421 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
SCMH1-216ENST00000489421 TRPM2O94759 1503 aa10.29□□□□□ -0.76
SCMH1-216ENST00000489421 ROBO1Q9Y6N7 1651 aa10.29□□□□□ -0.76
SCMH1-216ENST00000489421 FAM198AQ9UFP1 575 aa10.29□□□□□ -0.76
SCMH1-216ENST00000489421 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
SCMH1-216ENST00000489421 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.28□□□□□ -0.76
SCMH1-216ENST00000489421 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
SCMH1-216ENST00000489421 LAPTM4BQ86VI4 370 aa10.28□□□□□ -0.76
SCMH1-216ENST00000489421 PLA2G2EQ9NZK7 142 aa10.28□□□□□ -0.76
SCMH1-216ENST00000489421 NALCNQ8IZF0 1738 aa10.27□□□□□ -0.76
SCMH1-216ENST00000489421 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
SCMH1-216ENST00000489421 DIP2AQ14689 1571 aa10.26□□□□□ -0.77
SCMH1-216ENST00000489421 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
SCMH1-216ENST00000489421 PRSS12P56730 875 aa10.26□□□□□ -0.77
SCMH1-216ENST00000489421 TXNDC2Q86VQ3 553 aa10.26□□□□□ -0.77
SCMH1-216ENST00000489421 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
SCMH1-216ENST00000489421 SETBP1Q9Y6X0 1596 aa10.26□□□□□ -0.77
SCMH1-216ENST00000489421 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
SCMH1-216ENST00000489421 ADAMTS13Q76LX8 1427 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 RIMS2Q9UQ26 1411 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 BCAMP50895 628 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
SCMH1-216ENST00000489421 NKTRP30414 1462 aaKnown RBP10.24□□□□□ -0.77
SCMH1-216ENST00000489421 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
SCMH1-216ENST00000489421 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
SCMH1-216ENST00000489421 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
SCMH1-216ENST00000489421 PHLPP1O60346 1717 aa10.23□□□□□ -0.77
SCMH1-216ENST00000489421 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
SCMH1-216ENST00000489421 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
SCMH1-216ENST00000489421 SMAPO00193 183 aa10.22□□□□□ -0.77
SCMH1-216ENST00000489421 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
SCMH1-216ENST00000489421 PACS2Q86VP3 889 aa10.22□□□□□ -0.77
SCMH1-216ENST00000489421 SLC26A8Q96RN1 970 aa10.22□□□□□ -0.77
SCMH1-216ENST00000489421 SLC52A1Q9NWF4 448 aa10.22□□□□□ -0.77
SCMH1-216ENST00000489421 CCDC144AA2RUR9 1427 aa10.21□□□□□ -0.78
SCMH1-216ENST00000489421 PTPRUQ92729 1446 aa10.21□□□□□ -0.78
SCMH1-216ENST00000489421 COL16A1Q07092 1604 aaPredicted RBP10.2□□□□□ -0.78
SCMH1-216ENST00000489421 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 TMEM94Q12767 1356 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 SEMA3EO15041 775 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 HSPA1LP34931 641 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 NUTM2DQ5VT03 806 aaPredicted RBP10.19□□□□□ -0.78
SCMH1-216ENST00000489421 ILDR2Q71H61 639 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
SCMH1-216ENST00000489421 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
SCMH1-216ENST00000489421 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
SCMH1-216ENST00000489421 TTC13Q8NBP0 860 aa10.18□□□□□ -0.78
SCMH1-216ENST00000489421 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
SCMH1-216ENST00000489421 KNDC1Q76NI1 1749 aa10.18□□□□□ -0.78
SCMH1-216ENST00000489421 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
SCMH1-216ENST00000489421 PADI6Q6TGC4 694 aa10.17□□□□□ -0.78
SCMH1-216ENST00000489421 TATDN2Q93075 761 aa10.17□□□□□ -0.78
SCMH1-216ENST00000489421 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
SCMH1-216ENST00000489421 ASXL1Q8IXJ9 1541 aa10.17□□□□□ -0.78
SCMH1-216ENST00000489421 SPATA31E1Q6ZUB1 1445 aa10.16□□□□□ -0.78
SCMH1-216ENST00000489421 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
SCMH1-216ENST00000489421 KCNA6P17658 529 aa10.16□□□□□ -0.78
SCMH1-216ENST00000489421 NBPF8Q3BBV2 869 aa10.16□□□□□ -0.78
SCMH1-216ENST00000489421 PNMA3Q9UL41 463 aa10.16□□□□□ -0.78
SCMH1-216ENST00000489421 SHPRHQ149N8 1683 aa10.15□□□□□ -0.78
SCMH1-216ENST00000489421 LRCH3Q96II8 777 aa10.15□□□□□ -0.78
SCMH1-216ENST00000489421 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
SCMH1-216ENST00000489421 TOM1O60784 492 aa10.14□□□□□ -0.79
SCMH1-216ENST00000489421 NUDT18Q6ZVK8 323 aa10.14□□□□□ -0.79
SCMH1-216ENST00000489421 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
SCMH1-216ENST00000489421 PTGDRQ13258 359 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 LAMC1P11047 1609 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 AHDC1Q5TGY3 1603 aaPredicted RBP10.13□□□□□ -0.79
SCMH1-216ENST00000489421 METP08581 1390 aa10.13□□□□□ -0.79
SCMH1-216ENST00000489421 TSR3Q9UJK0 312 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms