RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 AATKQ6ZMQ8 1374 aa14.6□□□□□ -0.07
PTPN7-213ENST00000486116 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
PTPN7-213ENST00000486116 WASLO00401 505 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-213ENST00000486116 HSPA6P17066 643 aa14.59□□□□□ -0.07
PTPN7-213ENST00000486116 DDB1Q16531 1140 aa14.59□□□□□ -0.07
PTPN7-213ENST00000486116 ATP10DQ9P241 1426 aa14.58□□□□□ -0.07
PTPN7-213ENST00000486116 COL18A1P39060 1754 aa14.58□□□□□ -0.08
PTPN7-213ENST00000486116 MARCH10Q8NA82 808 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-213ENST00000486116 USP19O94966 1318 aa14.58□□□□□ -0.08
PTPN7-213ENST00000486116 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.08
PTPN7-213ENST00000486116 RGPD5Q99666 1765 aa14.57□□□□□ -0.08
PTPN7-213ENST00000486116 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
PTPN7-213ENST00000486116 BTAF1O14981 1849 aa14.57□□□□□ -0.08
PTPN7-213ENST00000486116 POLR3AO14802 1390 aaPredicted RBP14.55□□□□□ -0.08
PTPN7-213ENST00000486116 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
PTPN7-213ENST00000486116 NLGN2Q8NFZ4 835 aa14.54□□□□□ -0.08
PTPN7-213ENST00000486116 TRAK1Q9UPV9 953 aa14.54□□□□□ -0.08
PTPN7-213ENST00000486116 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.083e-8■□□□□ 10.5
PTPN7-213ENST00000486116 ZNF827Q17R98 1081 aa14.52□□□□□ -0.09
PTPN7-213ENST00000486116 NUDT16Q96DE0 195 aaKnown RBP14.52□□□□□ -0.09
PTPN7-213ENST00000486116 ACEP12821 1306 aa14.51□□□□□ -0.09
PTPN7-213ENST00000486116 GCP02774 474 aa14.51□□□□□ -0.09
PTPN7-213ENST00000486116 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
PTPN7-213ENST00000486116 ADCY9O60503 1353 aa14.5□□□□□ -0.09
PTPN7-213ENST00000486116 GPBP1L1Q9HC44 474 aaPredicted RBP14.5□□□□□ -0.09
PTPN7-213ENST00000486116 SLIT3O75094 1523 aa14.5□□□□□ -0.09
PTPN7-213ENST00000486116 GRIN3BO60391 1043 aa14.48□□□□□ -0.09
PTPN7-213ENST00000486116 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
PTPN7-213ENST00000486116 KAT6BQ8WYB5 2073 aa14.48□□□□□ -0.09
PTPN7-213ENST00000486116 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
PTPN7-213ENST00000486116 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
PTPN7-213ENST00000486116 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
PTPN7-213ENST00000486116 WDR17Q8IZU2 1322 aa14.46□□□□□ -0.09
PTPN7-213ENST00000486116 POLD1P28340 1107 aa14.46□□□□□ -0.09
PTPN7-213ENST00000486116 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
PTPN7-213ENST00000486116 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.09
PTPN7-213ENST00000486116 TNS2Q63HR2 1409 aa14.46□□□□□ -0.09
PTPN7-213ENST00000486116 WDR90Q96KV7 1748 aa14.46□□□□□ -0.1
PTPN7-213ENST00000486116 ABCC6O95255 1503 aa14.46□□□□□ -0.1
PTPN7-213ENST00000486116 PIK3C2AO00443 1686 aa14.46□□□□□ -0.1
PTPN7-213ENST00000486116 CAPN15O75808 1086 aa14.45□□□□□ -0.1
PTPN7-213ENST00000486116 NLRP13Q86W25 1043 aa14.45□□□□□ -0.1
PTPN7-213ENST00000486116 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
PTPN7-213ENST00000486116 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
PTPN7-213ENST00000486116 PNPLA7Q6ZV29 1317 aa14.44□□□□□ -0.1
PTPN7-213ENST00000486116 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
PTPN7-213ENST00000486116 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
PTPN7-213ENST00000486116 AXIN2Q9Y2T1 843 aa14.44□□□□□ -0.1
PTPN7-213ENST00000486116 COL13A1Q5TAT6 717 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-213ENST00000486116 DNAJC5GQ8N7S2 189 aa14.43□□□□□ -0.1
PTPN7-213ENST00000486116 ACSBG1Q96GR2 724 aa14.43□□□□□ -0.1
PTPN7-213ENST00000486116 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
PTPN7-213ENST00000486116 CDK19Q9BWU1 502 aa14.43□□□□□ -0.1
PTPN7-213ENST00000486116 LY75O60449 1722 aa14.42□□□□□ -0.1
PTPN7-213ENST00000486116 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
PTPN7-213ENST00000486116 USP6P35125 1406 aa14.41□□□□□ -0.1
PTPN7-213ENST00000486116 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
PTPN7-213ENST00000486116 EXOC5O00471 708 aa14.41□□□□□ -0.1
PTPN7-213ENST00000486116 KIF3CO14782 793 aa14.41□□□□□ -0.1
PTPN7-213ENST00000486116 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
PTPN7-213ENST00000486116 APLP1P51693 650 aa14.4□□□□□ -0.1
PTPN7-213ENST00000486116 CARD10Q9BWT7 1032 aa14.4□□□□□ -0.1
PTPN7-213ENST00000486116 QRICH2Q9H0J4 1663 aa14.39□□□□□ -0.11
PTPN7-213ENST00000486116 PRELPP51888 382 aa14.38□□□□□ -0.11
PTPN7-213ENST00000486116 PPIP5K1Q6PFW1 1433 aa14.38□□□□□ -0.11
PTPN7-213ENST00000486116 CCDC7Q96M83 1385 aa14.36□□□□□ -0.11
PTPN7-213ENST00000486116 NLRP6P59044 892 aa14.36□□□□□ -0.11
PTPN7-213ENST00000486116 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
PTPN7-213ENST00000486116 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
PTPN7-213ENST00000486116 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
PTPN7-213ENST00000486116 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
PTPN7-213ENST00000486116 NFAT5O94916 1531 aa14.34□□□□□ -0.11
PTPN7-213ENST00000486116 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.11
PTPN7-213ENST00000486116 KCNQ4P56696 695 aa14.33□□□□□ -0.12
PTPN7-213ENST00000486116 SLC27A3Q5K4L6 730 aa14.33□□□□□ -0.12
PTPN7-213ENST00000486116 ARHGEF25Q86VW2 580 aa14.33□□□□□ -0.12
PTPN7-213ENST00000486116 SLC34A2O95436 690 aa14.32□□□□□ -0.12
PTPN7-213ENST00000486116 LTN1O94822 1766 aa14.32□□□□□ -0.12
PTPN7-213ENST00000486116 PCNTO95613 3336 aa14.31□□□□□ -0.12
PTPN7-213ENST00000486116 C5P01031 1676 aa14.31□□□□□ -0.12
PTPN7-213ENST00000486116 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
PTPN7-213ENST00000486116 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
PTPN7-213ENST00000486116 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
PTPN7-213ENST00000486116 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
PTPN7-213ENST00000486116 CD2APQ9Y5K6 639 aa14.3□□□□□ -0.12
PTPN7-213ENST00000486116 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
PTPN7-213ENST00000486116 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
PTPN7-213ENST00000486116 HTRA3P83110 453 aa14.29□□□□□ -0.12
PTPN7-213ENST00000486116 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
PTPN7-213ENST00000486116 KLRG1Q96E93 195 aa14.29□□□□□ -0.12
PTPN7-213ENST00000486116 TOMM70O94826 608 aa14.28□□□□□ -0.12
PTPN7-213ENST00000486116 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
PTPN7-213ENST00000486116 SOX12O15370 315 aa14.27□□□□□ -0.13
PTPN7-213ENST00000486116 NSD2O96028 1365 aa14.26□□□□□ -0.13
PTPN7-213ENST00000486116 MSH5O43196 834 aa14.26□□□□□ -0.13
PTPN7-213ENST00000486116 SRPK2P78362 688 aaKnown RBP14.26□□□□□ -0.13
PTPN7-213ENST00000486116 CABP2Q9NPB3 220 aa14.26□□□□□ -0.13
PTPN7-213ENST00000486116 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
PTPN7-213ENST00000486116 KIAA1551Q9HCM1 1747 aa14.26□□□□□ -0.13
PTPN7-213ENST00000486116 TOGARAM1Q9Y4F4 1720 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms