RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 FOXO3O43524 673 aa13.28□□□□□ -0.28
HLA-B-253ENST00000481849 PIK3C2GO75747 1445 aa13.28□□□□□ -0.28
HLA-B-253ENST00000481849 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
HLA-B-253ENST00000481849 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
HLA-B-253ENST00000481849 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
HLA-B-253ENST00000481849 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.29
HLA-B-253ENST00000481849 SAFB2Q14151 953 aaKnown RBP eCLIP13.26□□□□□ -0.29
HLA-B-253ENST00000481849 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
HLA-B-253ENST00000481849 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
HLA-B-253ENST00000481849 YTHDC2Q9H6S0 1430 aaKnown RBP13.26□□□□□ -0.29
HLA-B-253ENST00000481849 USP21Q9UK80 565 aa13.26□□□□□ -0.29
HLA-B-253ENST00000481849 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
HLA-B-253ENST00000481849 TECPR2O15040 1411 aa13.25□□□□□ -0.29
HLA-B-253ENST00000481849 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
HLA-B-253ENST00000481849 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
HLA-B-253ENST00000481849 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
HLA-B-253ENST00000481849 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
HLA-B-253ENST00000481849 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
HLA-B-253ENST00000481849 PRELPP51888 382 aa13.23□□□□□ -0.29
HLA-B-253ENST00000481849 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
HLA-B-253ENST00000481849 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
HLA-B-253ENST00000481849 PXDNQ92626 1479 aa13.23□□□□□ -0.29
HLA-B-253ENST00000481849 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
HLA-B-253ENST00000481849 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
HLA-B-253ENST00000481849 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
HLA-B-253ENST00000481849 LAMC1P11047 1609 aa13.22□□□□□ -0.29
HLA-B-253ENST00000481849 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
HLA-B-253ENST00000481849 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
HLA-B-253ENST00000481849 ERBB3P21860 1342 aa13.21□□□□□ -0.29
HLA-B-253ENST00000481849 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
HLA-B-253ENST00000481849 POGKQ9P215 609 aa13.21□□□□□ -0.29
HLA-B-253ENST00000481849 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
HLA-B-253ENST00000481849 FNBP4Q8N3X1 1017 aaPredicted RBP13.2□□□□□ -0.3
HLA-B-253ENST00000481849 KRTAP3-3Q9BYR6 98 aa13.2□□□□□ -0.3
HLA-B-253ENST00000481849 KRTAP3-2Q9BYR7 98 aa13.2□□□□□ -0.3
HLA-B-253ENST00000481849 MYOM2P54296 1465 aa13.2□□□□□ -0.3
HLA-B-253ENST00000481849 NRXN1Q9ULB1 1477 aa13.19□□□□□ -0.3
HLA-B-253ENST00000481849 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
HLA-B-253ENST00000481849 SIRT1Q96EB6 747 aa13.19□□□□□ -0.3
HLA-B-253ENST00000481849 TRAK1Q9UPV9 953 aa13.19□□□□□ -0.3
HLA-B-253ENST00000481849 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
HLA-B-253ENST00000481849 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
HLA-B-253ENST00000481849 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
HLA-B-253ENST00000481849 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
HLA-B-253ENST00000481849 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
HLA-B-253ENST00000481849 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
HLA-B-253ENST00000481849 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
HLA-B-253ENST00000481849 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
HLA-B-253ENST00000481849 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
HLA-B-253ENST00000481849 ATRNO75882 1429 aa13.16□□□□□ -0.3
HLA-B-253ENST00000481849 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
HLA-B-253ENST00000481849 PSME1Q06323 249 aa13.16□□□□□ -0.3
HLA-B-253ENST00000481849 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
HLA-B-253ENST00000481849 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
HLA-B-253ENST00000481849 GIGYF1O75420 1035 aaPredicted RBP13.13□□□□□ -0.31
HLA-B-253ENST00000481849 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
HLA-B-253ENST00000481849 CHD4Q14839 1912 aa13.13□□□□□ -0.31
HLA-B-253ENST00000481849 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
HLA-B-253ENST00000481849 UNC5CLQ8IV45 518 aa13.12□□□□□ -0.31
HLA-B-253ENST00000481849 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
HLA-B-253ENST00000481849 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
HLA-B-253ENST00000481849 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
HLA-B-253ENST00000481849 GPR153Q6NV75 609 aa13.11□□□□□ -0.31
HLA-B-253ENST00000481849 DLC1Q96QB1 1528 aa13.11□□□□□ -0.31
HLA-B-253ENST00000481849 PRR36Q9H6K5 1346 aa13.11□□□□□ -0.31
HLA-B-253ENST00000481849 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
HLA-B-253ENST00000481849 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
HLA-B-253ENST00000481849 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
HLA-B-253ENST00000481849 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
HLA-B-253ENST00000481849 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
HLA-B-253ENST00000481849 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
HLA-B-253ENST00000481849 SLIT2O94813 1529 aa13.08□□□□□ -0.31
HLA-B-253ENST00000481849 ARHGEF10O15013 1369 aa13.08□□□□□ -0.31
HLA-B-253ENST00000481849 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
HLA-B-253ENST00000481849 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
HLA-B-253ENST00000481849 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
HLA-B-253ENST00000481849 FAM83GA6ND36 823 aa13.07□□□□□ -0.32
HLA-B-253ENST00000481849 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
HLA-B-253ENST00000481849 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
HLA-B-253ENST00000481849 A0A0G2JS52 829 aa13.06□□□□□ -0.32
HLA-B-253ENST00000481849 MYT1Q01538 1121 aa13.06□□□□□ -0.32
HLA-B-253ENST00000481849 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
HLA-B-253ENST00000481849 TMC2Q8TDI7 906 aa13.06□□□□□ -0.32
HLA-B-253ENST00000481849 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
HLA-B-253ENST00000481849 NINLQ9Y2I6 1382 aa13.06□□□□□ -0.32
HLA-B-253ENST00000481849 RGPD8O14715 1765 aaPredicted RBP13.05□□□□□ -0.32
HLA-B-253ENST00000481849 SF3B2Q13435 895 aaKnown RBP13.05□□□□□ -0.32
HLA-B-253ENST00000481849 VPS72Q15906 364 aa13.05□□□□□ -0.32
HLA-B-253ENST00000481849 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
HLA-B-253ENST00000481849 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
HLA-B-253ENST00000481849 ADGRB2O60241 1585 aa13.05□□□□□ -0.32
HLA-B-253ENST00000481849 TULP4Q9NRJ4 1543 aa13.04□□□□□ -0.32
HLA-B-253ENST00000481849 GLI3P10071 1580 aa13.04□□□□□ -0.32
HLA-B-253ENST00000481849 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
HLA-B-253ENST00000481849 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
HLA-B-253ENST00000481849 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
HLA-B-253ENST00000481849 MARF1Q9Y4F3 1742 aaKnown RBP13.03□□□□□ -0.32
HLA-B-253ENST00000481849 KIF3CO14782 793 aa13.03□□□□□ -0.32
HLA-B-253ENST00000481849 PPP1R37O75864 691 aa13.03□□□□□ -0.32
HLA-B-253ENST00000481849 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms