RNA–Protein interactions for RNA: ENST00000478993.5

DDX3X-204, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 1 (best)

Gene DDX3X, Length 3,397 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-204ENST00000478993 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
DDX3X-204ENST00000478993 TNPO1Q92973 898 aaKnown RBP11.99□□□□□ -0.49
DDX3X-204ENST00000478993 RRP9O43818 475 aaKnown RBP11.99□□□□□ -0.49
DDX3X-204ENST00000478993 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
DDX3X-204ENST00000478993 NEO1Q92859 1461 aa11.98□□□□□ -0.49
DDX3X-204ENST00000478993 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
DDX3X-204ENST00000478993 CD2BP2O95400 341 aaKnown RBP11.98□□□□□ -0.49
DDX3X-204ENST00000478993 SIRT2Q8IXJ6 389 aa11.98□□□□□ -0.49
DDX3X-204ENST00000478993 ATP10DQ9P241 1426 aa11.98□□□□□ -0.49
DDX3X-204ENST00000478993 PDLIM2Q96JY6 352 aa11.98□□□□□ -0.49
DDX3X-204ENST00000478993 PTMSP20962 102 aa11.97□□□□□ -0.49
DDX3X-204ENST00000478993 RRP7AQ9Y3A4 280 aaKnown RBP11.97□□□□□ -0.49
DDX3X-204ENST00000478993 KIF3BO15066 747 aa11.97□□□□□ -0.49
DDX3X-204ENST00000478993 TMEM57Q8N5G2 664 aa11.97□□□□□ -0.49
DDX3X-204ENST00000478993 EXOSC9Q06265 439 aaKnown RBP11.96□□□□□ -0.49
DDX3X-204ENST00000478993 ZNF445P59923 1031 aa11.96□□□□□ -0.49
DDX3X-204ENST00000478993 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.49
DDX3X-204ENST00000478993 EVC2Q86UK5 1308 aa11.96□□□□□ -0.49
DDX3X-204ENST00000478993 ESPNB1AK53 854 aa11.96□□□□□ -0.5
DDX3X-204ENST00000478993 CHD1LQ86WJ1 897 aa11.96□□□□□ -0.5
DDX3X-204ENST00000478993 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.5
DDX3X-204ENST00000478993 FMN2Q9NZ56 1722 aa11.96□□□□□ -0.5
DDX3X-204ENST00000478993 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
DDX3X-204ENST00000478993 ATAD2Q6PL18 1390 aa11.95□□□□□ -0.5
DDX3X-204ENST00000478993 FAM208AQ9UK61 1670 aaKnown RBP11.95□□□□□ -0.5
DDX3X-204ENST00000478993 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
DDX3X-204ENST00000478993 FYB1O15117 783 aa11.95□□□□□ -0.5
DDX3X-204ENST00000478993 GCC1Q96CN9 775 aa11.95□□□□□ -0.5
DDX3X-204ENST00000478993 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
DDX3X-204ENST00000478993 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
DDX3X-204ENST00000478993 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
DDX3X-204ENST00000478993 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
DDX3X-204ENST00000478993 A0A0U1RQG5 324 aaPredicted RBP11.94□□□□□ -0.5
DDX3X-204ENST00000478993 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
DDX3X-204ENST00000478993 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
DDX3X-204ENST00000478993 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
DDX3X-204ENST00000478993 RIMS1Q86UR5 1692 aaKnown RBP11.93□□□□□ -0.5
DDX3X-204ENST00000478993 KLHL40Q2TBA0 621 aa11.93□□□□□ -0.5
DDX3X-204ENST00000478993 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
DDX3X-204ENST00000478993 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
DDX3X-204ENST00000478993 CPS1P31327 1500 aa11.92□□□□□ -0.5
DDX3X-204ENST00000478993 VAMP4O75379 141 aa11.92□□□□□ -0.5
DDX3X-204ENST00000478993 FCHSD2O94868 740 aa11.92□□□□□ -0.5
DDX3X-204ENST00000478993 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
DDX3X-204ENST00000478993 CANXP27824 592 aaKnown RBP11.91□□□□□ -0.5
DDX3X-204ENST00000478993 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
DDX3X-204ENST00000478993 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
DDX3X-204ENST00000478993 TRAK1Q9UPV9 953 aa11.9□□□□□ -0.5
DDX3X-204ENST00000478993 ZNF500O60304 480 aaPredicted RBP11.9□□□□□ -0.5
DDX3X-204ENST00000478993 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.5
DDX3X-204ENST00000478993 MFAP1P55081 439 aaKnown RBP11.9□□□□□ -0.5
DDX3X-204ENST00000478993 HSCBQ8IWL3 235 aa11.9□□□□□ -0.5
DDX3X-204ENST00000478993 TPM2P07951 284 aa11.9□□□□□ -0.51
DDX3X-204ENST00000478993 SMC4Q9NTJ3 1288 aa11.9□□□□□ -0.51
DDX3X-204ENST00000478993 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
DDX3X-204ENST00000478993 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
DDX3X-204ENST00000478993 OFD1O75665 1012 aa11.89□□□□□ -0.51
DDX3X-204ENST00000478993 TECPR2O15040 1411 aa11.89□□□□□ -0.51
DDX3X-204ENST00000478993 DIP2AQ14689 1571 aa11.89□□□□□ -0.51
DDX3X-204ENST00000478993 AGLP35573 1532 aa11.89□□□□□ -0.51
DDX3X-204ENST00000478993 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
DDX3X-204ENST00000478993 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
DDX3X-204ENST00000478993 IPO8O15397 1037 aaKnown RBP11.88□□□□□ -0.51
DDX3X-204ENST00000478993 LMBRD1Q9NUN5 540 aa11.88□□□□□ -0.51
DDX3X-204ENST00000478993 TMEM132EQ6IEE7 984 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 SALL3Q9BXA9 1300 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 FTSJ3Q8IY81 847 aaKnown RBP11.87□□□□□ -0.51
DDX3X-204ENST00000478993 DCTPP1Q9H773 170 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
DDX3X-204ENST00000478993 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
DDX3X-204ENST00000478993 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.512e-9■□□□□ 10.3
DDX3X-204ENST00000478993 ZDHHC9Q9Y397 364 aa11.87□□□□□ -0.51
DDX3X-204ENST00000478993 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
DDX3X-204ENST00000478993 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
DDX3X-204ENST00000478993 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
DDX3X-204ENST00000478993 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
DDX3X-204ENST00000478993 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
DDX3X-204ENST00000478993 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
DDX3X-204ENST00000478993 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
DDX3X-204ENST00000478993 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
DDX3X-204ENST00000478993 RIPK4P57078 832 aa11.85□□□□□ -0.51
DDX3X-204ENST00000478993 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
DDX3X-204ENST00000478993 OSBPL3Q9H4L5 887 aa11.85□□□□□ -0.51
DDX3X-204ENST00000478993 NOL7Q9UMY1 257 aaKnown RBP11.85□□□□□ -0.51
DDX3X-204ENST00000478993 IL13P35225 146 aa11.85□□□□□ -0.51
DDX3X-204ENST00000478993 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
DDX3X-204ENST00000478993 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
DDX3X-204ENST00000478993 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
DDX3X-204ENST00000478993 POLKQ9UBT6 870 aa11.84□□□□□ -0.51
DDX3X-204ENST00000478993 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
DDX3X-204ENST00000478993 SSFA2P28290 1259 aa11.83□□□□□ -0.52
DDX3X-204ENST00000478993 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
DDX3X-204ENST00000478993 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
DDX3X-204ENST00000478993 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
DDX3X-204ENST00000478993 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
DDX3X-204ENST00000478993 A2ML1A8K2U0 1454 aa11.82□□□□□ -0.52
DDX3X-204ENST00000478993 DIAPH1O60610 1272 aaKnown RBP11.82□□□□□ -0.52
DDX3X-204ENST00000478993 RABEP1Q15276 862 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms