RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLEKHG3A1L390 1219 aa10.96□□□□□ -0.65
SPTLC1-205ENST00000477888 PPARGC1BQ86YN6 1023 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-205ENST00000477888 MPHOSPH9Q99550 1183 aa10.96□□□□□ -0.65
SPTLC1-205ENST00000477888 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 PPP4R3CPQ6ZMV5 832 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 TOM1L2Q6ZVM7 507 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 CDCA7Q9BWT1 371 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
SPTLC1-205ENST00000477888 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 ZNF827Q17R98 1081 aa10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 NLGN2Q8NFZ4 835 aa10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 SLC16A10Q8TF71 515 aa10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 CCDC61Q9Y6R9 512 aa10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 PHRF1Q9P1Y6 1649 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-205ENST00000477888 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-205ENST00000477888 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
SPTLC1-205ENST00000477888 CDK19Q9BWU1 502 aa10.93□□□□□ -0.66
SPTLC1-205ENST00000477888 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-205ENST00000477888 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
SPTLC1-205ENST00000477888 ATP10DQ9P241 1426 aa10.92□□□□□ -0.66
SPTLC1-205ENST00000477888 POLD1P28340 1107 aa10.92□□□□□ -0.66
SPTLC1-205ENST00000477888 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
SPTLC1-205ENST00000477888 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
SPTLC1-205ENST00000477888 EXOC5O00471 708 aa10.91□□□□□ -0.66
SPTLC1-205ENST00000477888 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
SPTLC1-205ENST00000477888 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
SPTLC1-205ENST00000477888 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
SPTLC1-205ENST00000477888 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
SPTLC1-205ENST00000477888 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
SPTLC1-205ENST00000477888 CARD10Q9BWT7 1032 aa10.89□□□□□ -0.67
SPTLC1-205ENST00000477888 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
SPTLC1-205ENST00000477888 ADCY9O60503 1353 aa10.88□□□□□ -0.67
SPTLC1-205ENST00000477888 PNPLA7Q6ZV29 1317 aa10.87□□□□□ -0.67
SPTLC1-205ENST00000477888 NLRP6P59044 892 aa10.87□□□□□ -0.67
SPTLC1-205ENST00000477888 COL13A1Q5TAT6 717 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1-205ENST00000477888 KIF3CO14782 793 aa10.86□□□□□ -0.67
SPTLC1-205ENST00000477888 APLP1P51693 650 aa10.86□□□□□ -0.67
SPTLC1-205ENST00000477888 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
SPTLC1-205ENST00000477888 ZNF526Q8TF50 670 aaPredicted RBP10.86□□□□□ -0.67
SPTLC1-205ENST00000477888 PAPPAQ13219 1627 aa10.86□□□□□ -0.67
SPTLC1-205ENST00000477888 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
SPTLC1-205ENST00000477888 BRD4O60885 1362 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1-205ENST00000477888 USP6P35125 1406 aa10.84□□□□□ -0.67
SPTLC1-205ENST00000477888 CSB-PGBD3P0DP91 1061 aa10.84□□□□□ -0.67
SPTLC1-205ENST00000477888 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
SPTLC1-205ENST00000477888 TFCP2L1Q9NZI6 479 aa10.84□□□□□ -0.67
SPTLC1-205ENST00000477888 PRELPP51888 382 aa10.83□□□□□ -0.68
SPTLC1-205ENST00000477888 DCAF11Q8TEB1 546 aa10.83□□□□□ -0.68
SPTLC1-205ENST00000477888 CCDC7Q96M83 1385 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 CAPN15O75808 1086 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 SLIT3O75094 1523 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 TNS2Q63HR2 1409 aa10.82□□□□□ -0.68
SPTLC1-205ENST00000477888 KCNQ4P56696 695 aa10.81□□□□□ -0.68
SPTLC1-205ENST00000477888 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
SPTLC1-205ENST00000477888 CPSF1Q10570 1443 aaKnown RBP10.81□□□□□ -0.68
SPTLC1-205ENST00000477888 PPIP5K1Q6PFW1 1433 aa10.81□□□□□ -0.68
SPTLC1-205ENST00000477888 COL23A1Q86Y22 540 aaPredicted RBP10.8□□□□□ -0.68
SPTLC1-205ENST00000477888 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
SPTLC1-205ENST00000477888 KCNH5Q8NCM2 988 aa10.8□□□□□ -0.68
SPTLC1-205ENST00000477888 ITSN1Q15811 1721 aa10.8□□□□□ -0.68
SPTLC1-205ENST00000477888 COL18A1P39060 1754 aa10.8□□□□□ -0.68
SPTLC1-205ENST00000477888 COL24A1Q17RW2 1714 aa10.79□□□□□ -0.68
SPTLC1-205ENST00000477888 TOMM70O94826 608 aa10.79□□□□□ -0.68
SPTLC1-205ENST00000477888 SRPK2P78362 688 aaKnown RBP10.79□□□□□ -0.68
SPTLC1-205ENST00000477888 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
SPTLC1-205ENST00000477888 IL2RBP14784 551 aa10.78□□□□□ -0.68
SPTLC1-205ENST00000477888 TNS4Q8IZW8 715 aa10.78□□□□□ -0.68
SPTLC1-205ENST00000477888 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
SPTLC1-205ENST00000477888 TOPAZ1Q8N9V7 1692 aa10.78□□□□□ -0.68
SPTLC1-205ENST00000477888 ARHGEF28Q8N1W1 1705 aaKnown RBP10.78□□□□□ -0.68
SPTLC1-205ENST00000477888 KLRG1Q96E93 195 aa10.77□□□□□ -0.69
SPTLC1-205ENST00000477888 ABCC6O95255 1503 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 SOX12O15370 315 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 SLC34A2O95436 690 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 MSL1Q68DK7 614 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 TRPM1Q7Z4N2 1603 aa10.76□□□□□ -0.69
SPTLC1-205ENST00000477888 AKAP12Q02952 1782 aa10.75□□□□□ -0.69
SPTLC1-205ENST00000477888 MSH5O43196 834 aa10.75□□□□□ -0.69
SPTLC1-205ENST00000477888 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
SPTLC1-205ENST00000477888 ERBB3P21860 1342 aa10.75□□□□□ -0.69
SPTLC1-205ENST00000477888 TTC21BQ7Z4L5 1316 aa10.75□□□□□ -0.69
SPTLC1-205ENST00000477888 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-205ENST00000477888 WNK3Q9BYP7 1800 aa10.74□□□□□ -0.69
SPTLC1-205ENST00000477888 PCNTO95613 3336 aa10.74□□□□□ -0.69
SPTLC1-205ENST00000477888 HTRA3P83110 453 aa10.73□□□□□ -0.69
SPTLC1-205ENST00000477888 DDX54Q8TDD1 881 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-205ENST00000477888 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-205ENST00000477888 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-205ENST00000477888 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
SPTLC1-205ENST00000477888 WWC3Q9ULE0 1092 aa10.72□□□□□ -0.69
SPTLC1-205ENST00000477888 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
SPTLC1-205ENST00000477888 QSER1Q2KHR3 1735 aa10.72□□□□□ -0.69
SPTLC1-205ENST00000477888 BTAF1O14981 1849 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms