RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
NPAS2-208ENST00000474550 PRPF40AO75400 957 aaKnown RBP12.42□□□□□ -0.42
NPAS2-208ENST00000474550 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
NPAS2-208ENST00000474550 MBD5Q9P267 1494 aa12.42□□□□□ -0.42
NPAS2-208ENST00000474550 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
NPAS2-208ENST00000474550 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
NPAS2-208ENST00000474550 ANKRD20A12PQ8NF67 263 aa12.42□□□□□ -0.42
NPAS2-208ENST00000474550 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
NPAS2-208ENST00000474550 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
NPAS2-208ENST00000474550 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
NPAS2-208ENST00000474550 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
NPAS2-208ENST00000474550 KIF1BO60333 1816 aa12.41□□□□□ -0.42
NPAS2-208ENST00000474550 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
NPAS2-208ENST00000474550 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
NPAS2-208ENST00000474550 CFAP74Q9C0B2 1584 aa12.41□□□□□ -0.42
NPAS2-208ENST00000474550 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 FANCAO15360 1455 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 DHX16O60231 1041 aaKnown RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 CWC15Q9P013 229 aaKnown RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 NUCB1Q02818 461 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 A2MP01023 1474 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 C14orf93Q9H972 538 aaKnown RBP12.4□□□□□ -0.42
NPAS2-208ENST00000474550 MAGI3Q5TCQ9 1506 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 KRT85P78386 507 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 TRIM29Q14134 588 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 KRT32Q14532 448 aa12.4□□□□□ -0.42
NPAS2-208ENST00000474550 TTC37Q6PGP7 1564 aa12.4□□□□□ -0.43
NPAS2-208ENST00000474550 TESK2Q96S53 571 aa12.4□□□□□ -0.43
NPAS2-208ENST00000474550 UBE2Q2Q8WVN8 375 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
NPAS2-208ENST00000474550 SOX12O15370 315 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
NPAS2-208ENST00000474550 DYNC1I1O14576 645 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
NPAS2-208ENST00000474550 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 SETQ01105 290 aaPredicted RBP12.39□□□□□ -0.43
NPAS2-208ENST00000474550 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
NPAS2-208ENST00000474550 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 ANAPC15P60006 121 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 CFAP45Q9UL16 551 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 PRIMPOLQ96LW4 560 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 VPS37CA5D8V6 355 aaPredicted RBP12.38□□□□□ -0.43
NPAS2-208ENST00000474550 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
NPAS2-208ENST00000474550 NEMFO60524 1076 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 TERF1P54274 439 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
NPAS2-208ENST00000474550 HMOX1P09601 288 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 TRIM27P14373 513 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
NPAS2-208ENST00000474550 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 NUTM2DQ5VT03 806 aaPredicted RBP12.37□□□□□ -0.43
NPAS2-208ENST00000474550 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
NPAS2-208ENST00000474550 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
NPAS2-208ENST00000474550 UQCRHLA0A096LP55 91 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 UQCRHP07919 91 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 TRDNQ13061 729 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 MLECQ14165 292 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 JMYQ8N9B5 988 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 PKNOX2Q96KN3 472 aa12.36□□□□□ -0.43
NPAS2-208ENST00000474550 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 KIF24Q5T7B8 1368 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 NOS1P29475 1434 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 CPLX1O14810 134 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 TRPM1Q7Z4N2 1603 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
NPAS2-208ENST00000474550 PIP4K2AP48426 406 aaPredicted RBP12.34□□□□□ -0.43
NPAS2-208ENST00000474550 TRIM5Q9C035 493 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
NPAS2-208ENST00000474550 MNS1Q8NEH6 495 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 CTAGE5O15320 804 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 AKAP17AQ02040 695 aaKnown RBP12.34□□□□□ -0.43
NPAS2-208ENST00000474550 TPD52L1Q16890 204 aaPredicted RBP12.34□□□□□ -0.43
NPAS2-208ENST00000474550 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
NPAS2-208ENST00000474550 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
NPAS2-208ENST00000474550 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.43
NPAS2-208ENST00000474550 CBFA2T2O43439 604 aa12.33□□□□□ -0.44
NPAS2-208ENST00000474550 IGHDP01880 384 aa12.33□□□□□ -0.44
NPAS2-208ENST00000474550 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
NPAS2-208ENST00000474550 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
NPAS2-208ENST00000474550 DACH1Q9UI36 760 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms