RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
HDAC6-217ENST00000469223 TUBGCP6Q96RT7 1819 aa18.95■□□□□ 0.62
HDAC6-217ENST00000469223 QSER1Q2KHR3 1735 aa18.94■□□□□ 0.62
HDAC6-217ENST00000469223 DDB1Q16531 1140 aa18.94■□□□□ 0.62
HDAC6-217ENST00000469223 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
HDAC6-217ENST00000469223 AATKQ6ZMQ8 1374 aa18.93■□□□□ 0.62
HDAC6-217ENST00000469223 USP19O94966 1318 aa18.93■□□□□ 0.62
HDAC6-217ENST00000469223 BCL9O00512 1426 aa18.92■□□□□ 0.62
HDAC6-217ENST00000469223 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
HDAC6-217ENST00000469223 TRAK1Q9UPV9 953 aa18.92■□□□□ 0.62
HDAC6-217ENST00000469223 BTAF1O14981 1849 aa18.91■□□□□ 0.62
HDAC6-217ENST00000469223 RGPD5Q99666 1765 aa18.91■□□□□ 0.62
HDAC6-217ENST00000469223 HSPA6P17066 643 aa18.9■□□□□ 0.62
HDAC6-217ENST00000469223 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-217ENST00000469223 COL18A1P39060 1754 aa18.9■□□□□ 0.62
HDAC6-217ENST00000469223 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
HDAC6-217ENST00000469223 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-217ENST00000469223 KAT6BQ8WYB5 2073 aa18.88■□□□□ 0.61
HDAC6-217ENST00000469223 ZBTB7CA1YPR0 619 aa18.87■□□□□ 0.61
HDAC6-217ENST00000469223 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
HDAC6-217ENST00000469223 ABTB2Q8N961 1025 aa18.86■□□□□ 0.61
HDAC6-217ENST00000469223 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
HDAC6-217ENST00000469223 ACEP12821 1306 aa18.84■□□□□ 0.61
HDAC6-217ENST00000469223 ZNF827Q17R98 1081 aa18.84■□□□□ 0.61
HDAC6-217ENST00000469223 TOM1L2Q6ZVM7 507 aa18.84■□□□□ 0.61
HDAC6-217ENST00000469223 SLIT3O75094 1523 aa18.83■□□□□ 0.6
HDAC6-217ENST00000469223 GCP02774 474 aa18.82■□□□□ 0.6
HDAC6-217ENST00000469223 YBX3P16989 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC6-217ENST00000469223 TNS2Q63HR2 1409 aa18.82■□□□□ 0.6
HDAC6-217ENST00000469223 GPBP1L1Q9HC44 474 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-217ENST00000469223 POLD1P28340 1107 aa18.8■□□□□ 0.6
HDAC6-217ENST00000469223 TRPM1Q7Z4N2 1603 aa18.8■□□□□ 0.6
HDAC6-217ENST00000469223 ABCC6O95255 1503 aa18.79■□□□□ 0.6
HDAC6-217ENST00000469223 PIK3C2AO00443 1686 aa18.79■□□□□ 0.6
HDAC6-217ENST00000469223 ZNF526Q8TF50 670 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-217ENST00000469223 ADCY9O60503 1353 aa18.79■□□□□ 0.6
HDAC6-217ENST00000469223 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
HDAC6-217ENST00000469223 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
HDAC6-217ENST00000469223 CAPN15O75808 1086 aa18.77■□□□□ 0.6
HDAC6-217ENST00000469223 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
HDAC6-217ENST00000469223 CDCA7Q9BWT1 371 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-217ENST00000469223 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-217ENST00000469223 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
HDAC6-217ENST00000469223 MPHOSPH9Q99550 1183 aa18.76■□□□□ 0.59
HDAC6-217ENST00000469223 PCNTO95613 3336 aa18.76■□□□□ 0.59
HDAC6-217ENST00000469223 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
HDAC6-217ENST00000469223 ACSBG1Q96GR2 724 aa18.75■□□□□ 0.59
HDAC6-217ENST00000469223 CDK19Q9BWU1 502 aa18.74■□□□□ 0.59
HDAC6-217ENST00000469223 WDR90Q96KV7 1748 aa18.74■□□□□ 0.59
HDAC6-217ENST00000469223 PNPLA7Q6ZV29 1317 aa18.73■□□□□ 0.59
HDAC6-217ENST00000469223 PLEKHG3A1L390 1219 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 CCDC61Q9Y6R9 512 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 USP6P35125 1406 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 PPIP5K1Q6PFW1 1433 aa18.72■□□□□ 0.59
HDAC6-217ENST00000469223 AXIN2Q9Y2T1 843 aa18.71■□□□□ 0.59
HDAC6-217ENST00000469223 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
HDAC6-217ENST00000469223 EXOC5O00471 708 aa18.69■□□□□ 0.58
HDAC6-217ENST00000469223 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
HDAC6-217ENST00000469223 LY75O60449 1722 aa18.69■□□□□ 0.58
HDAC6-217ENST00000469223 CSB-PGBD3P0DP91 1061 aa18.68■□□□□ 0.58
HDAC6-217ENST00000469223 APLP1P51693 650 aa18.67■□□□□ 0.58
HDAC6-217ENST00000469223 NLRP6P59044 892 aa18.67■□□□□ 0.58
HDAC6-217ENST00000469223 CCDC7Q96M83 1385 aa18.67■□□□□ 0.58
HDAC6-217ENST00000469223 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
HDAC6-217ENST00000469223 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-217ENST00000469223 NFAT5O94916 1531 aa18.64■□□□□ 0.58
HDAC6-217ENST00000469223 KIF3CO14782 793 aa18.64■□□□□ 0.57
HDAC6-217ENST00000469223 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
HDAC6-217ENST00000469223 KDM2AQ9Y2K7 1162 aa18.63■□□□□ 0.57
HDAC6-217ENST00000469223 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
HDAC6-217ENST00000469223 LTN1O94822 1766 aa18.62■□□□□ 0.57
HDAC6-217ENST00000469223 SOX12O15370 315 aa18.6■□□□□ 0.57
HDAC6-217ENST00000469223 KCNQ4P56696 695 aa18.6■□□□□ 0.57
HDAC6-217ENST00000469223 ARHGEF25Q86VW2 580 aa18.6■□□□□ 0.57
HDAC6-217ENST00000469223 PRELPP51888 382 aa18.59■□□□□ 0.57
HDAC6-217ENST00000469223 SLC27A3Q5K4L6 730 aa18.59■□□□□ 0.57
HDAC6-217ENST00000469223 MSL1Q68DK7 614 aa18.59■□□□□ 0.57
HDAC6-217ENST00000469223 TNS4Q8IZW8 715 aa18.59■□□□□ 0.57
HDAC6-217ENST00000469223 KIAA1210Q9ULL0 1709 aa18.59■□□□□ 0.57
HDAC6-217ENST00000469223 CICQ96RK0 1608 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-217ENST00000469223 C5P01031 1676 aa18.58■□□□□ 0.57
HDAC6-217ENST00000469223 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
HDAC6-217ENST00000469223 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
HDAC6-217ENST00000469223 MSH5O43196 834 aa18.57■□□□□ 0.56
HDAC6-217ENST00000469223 USP54Q70EL1 1684 aa18.55■□□□□ 0.56
HDAC6-217ENST00000469223 CABP2Q9NPB3 220 aa18.55■□□□□ 0.56
HDAC6-217ENST00000469223 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
HDAC6-217ENST00000469223 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
HDAC6-217ENST00000469223 CD2APQ9Y5K6 639 aa18.53■□□□□ 0.56
HDAC6-217ENST00000469223 IL2RBP14784 551 aa18.52■□□□□ 0.56
HDAC6-217ENST00000469223 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
HDAC6-217ENST00000469223 HTRA3P83110 453 aa18.51■□□□□ 0.55
HDAC6-217ENST00000469223 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-217ENST00000469223 NLRP2Q9NX02 1062 aa18.51■□□□□ 0.55
HDAC6-217ENST00000469223 FAM208AQ9UK61 1670 aaKnown RBP18.5■□□□□ 0.55
HDAC6-217ENST00000469223 ERBB3P21860 1342 aa18.5■□□□□ 0.55
HDAC6-217ENST00000469223 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
HDAC6-217ENST00000469223 TOMM70O94826 608 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms