RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 WASHC4Q2M389 1173 aa21.44■■□□□ 1.02
CHRD-208ENST00000460627 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
CHRD-208ENST00000460627 HIP1O00291 1037 aa21.44■■□□□ 1.02
CHRD-208ENST00000460627 FANCIQ9NVI1 1328 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 MYL6BP14649 208 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 RPAP2Q8IXW5 612 aaPredicted RBP21.43■■□□□ 1.02
CHRD-208ENST00000460627 TRIM34Q9BYJ4 488 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 NEO1Q92859 1461 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 PZPP20742 1482 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 MSH6P52701 1360 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
CHRD-208ENST00000460627 RALYLQ86SE5 291 aaKnown RBP21.42■■□□□ 1.02
CHRD-208ENST00000460627 STARD3NLO95772 234 aa21.41■■□□□ 1.02
CHRD-208ENST00000460627 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
CHRD-208ENST00000460627 CHAF1AQ13111 956 aaPredicted RBP21.41■■□□□ 1.02
CHRD-208ENST00000460627 FOXD4L5Q5VV16 416 aaPredicted RBP21.41■■□□□ 1.02
CHRD-208ENST00000460627 FOXD4L4Q8WXT5 416 aaPredicted RBP21.41■■□□□ 1.02
CHRD-208ENST00000460627 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
CHRD-208ENST00000460627 GOLGA6L3A6NEY3 463 aa21.41■■□□□ 1.02
CHRD-208ENST00000460627 FYB1O15117 783 aa21.41■■□□□ 1.02
CHRD-208ENST00000460627 AMER1Q5JTC6 1135 aaPredicted RBP21.41■■□□□ 1.02
CHRD-208ENST00000460627 LRRCC1Q9C099 1032 aa21.41■■□□□ 1.02
CHRD-208ENST00000460627 MARCH6O60337 910 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 TRIM29Q14134 588 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 TBX22Q9Y458 520 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 DCTN1Q14203 1278 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 GLIPR1L2Q4G1C9 344 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 CHMP5Q9NZZ3 219 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 ERICH2A1L162 156 aa21.4■■□□□ 1.02
CHRD-208ENST00000460627 SKOR2Q2VWA4 1001 aaPredicted RBP21.39■■□□□ 1.02
CHRD-208ENST00000460627 TESK2Q96S53 571 aa21.39■■□□□ 1.02
CHRD-208ENST00000460627 USHBP1Q8N6Y0 703 aa21.39■■□□□ 1.01
CHRD-208ENST00000460627 CNNM1Q9NRU3 951 aa21.39■■□□□ 1.01
CHRD-208ENST00000460627 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
CHRD-208ENST00000460627 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
CHRD-208ENST00000460627 SSH1Q8WYL5 1049 aa21.38■■□□□ 1.01
CHRD-208ENST00000460627 FBXW7Q969H0 707 aa21.38■■□□□ 1.01
CHRD-208ENST00000460627 TMOD3Q9NYL9 352 aa21.38■■□□□ 1.01
CHRD-208ENST00000460627 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
CHRD-208ENST00000460627 ASXL1Q8IXJ9 1541 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 NKTRP30414 1462 aaKnown RBP21.37■■□□□ 1.01
CHRD-208ENST00000460627 PSMA5P28066 241 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 KIAA2012Q0VF49 1180 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 PPIP5K1Q6PFW1 1433 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 SRGAP3O43295 1099 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 MIS18AQ9NYP9 233 aa21.37■■□□□ 1.01
CHRD-208ENST00000460627 CCDC57Q2TAC2 916 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 MCTP1Q6DN14 999 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 CLSTN1O94985 981 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 NUCB2P80303 420 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 SMC3Q9UQE7 1217 aa21.36■■□□□ 1.01
CHRD-208ENST00000460627 SF3B2Q13435 895 aaKnown RBP21.35■■□□□ 1.01
CHRD-208ENST00000460627 NFXL1Q6ZNB6 911 aa21.35■■□□□ 1.01
CHRD-208ENST00000460627 LARP1Q6PKG0 1096 aaKnown RBP21.35■■□□□ 1.01
CHRD-208ENST00000460627 IL16Q14005 1332 aa21.35■■□□□ 1.01
CHRD-208ENST00000460627 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
CHRD-208ENST00000460627 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
CHRD-208ENST00000460627 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
CHRD-208ENST00000460627 DNAJC2Q99543 621 aaKnown RBP21.34■■□□□ 1.01
CHRD-208ENST00000460627 PTCD1O75127 700 aaKnown RBP21.33■■□□□ 1.01
CHRD-208ENST00000460627 C19orf44Q9H6X5 657 aa21.33■■□□□ 1.01
CHRD-208ENST00000460627 MAST1Q9Y2H9 1570 aa21.33■■□□□ 1
CHRD-208ENST00000460627 ADAMTS2O95450 1211 aa21.33■■□□□ 1
CHRD-208ENST00000460627 MPRIPQ6WCQ1 1025 aa21.33■■□□□ 1
CHRD-208ENST00000460627 CHD1LQ86WJ1 897 aa21.33■■□□□ 1
CHRD-208ENST00000460627 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
CHRD-208ENST00000460627 MPHOSPH8Q99549 860 aa21.32■■□□□ 1
CHRD-208ENST00000460627 CEP126Q9P2H0 1117 aa21.32■■□□□ 1
CHRD-208ENST00000460627 ABCA8O94911 1581 aa21.32■■□□□ 1
CHRD-208ENST00000460627 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
CHRD-208ENST00000460627 NAP1L5Q96NT1 182 aaPredicted RBP21.31■■□□□ 1
CHRD-208ENST00000460627 MCM2P49736 904 aa21.31■■□□□ 1
CHRD-208ENST00000460627 YTHDC2Q9H6S0 1430 aaKnown RBP21.31■■□□□ 1
CHRD-208ENST00000460627 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
CHRD-208ENST00000460627 SIL1Q9H173 461 aa21.3■■□□□ 1
CHRD-208ENST00000460627 EXOC5O00471 708 aa21.3■■□□□ 1
CHRD-208ENST00000460627 VPS53Q5VIR6 699 aa21.3■■□□□ 1
CHRD-208ENST00000460627 TTC39AQ5SRH9 613 aa21.3■■□□□ 1
CHRD-208ENST00000460627 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
CHRD-208ENST00000460627 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 1
CHRD-208ENST00000460627 NGLY1Q96IV0 654 aa21.29■■□□□ 1
CHRD-208ENST00000460627 FMNL2Q96PY5 1086 aa21.29■■□□□ 1
CHRD-208ENST00000460627 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
CHRD-208ENST00000460627 PARD3Q8TEW0 1356 aa21.29■■□□□ 1
CHRD-208ENST00000460627 MAGI3Q5TCQ9 1506 aa21.29■■□□□ 1
CHRD-208ENST00000460627 FOXD4L6Q3SYB3 417 aaPredicted RBP21.29■■□□□ 1
CHRD-208ENST00000460627 FOXD4L3Q6VB84 417 aaPredicted RBP21.29■■□□□ 1
CHRD-208ENST00000460627 DHX16O60231 1041 aaKnown RBP21.28■■□□□ 1
CHRD-208ENST00000460627 RABEP1Q15276 862 aa21.28■■□□□ 1
CHRD-208ENST00000460627 VPS37CA5D8V6 355 aaPredicted RBP21.28■■□□□ 1
CHRD-208ENST00000460627 ARHGEF5Q12774 1597 aa21.28■■□□□ 1
CHRD-208ENST00000460627 KCNA6P17658 529 aa21.27■■□□□ 1
CHRD-208ENST00000460627 HYPKQ9NX55 129 aa21.27■■□□□ 1
CHRD-208ENST00000460627 ZNF652Q9Y2D9 606 aa21.27■■□□□ 1
CHRD-208ENST00000460627 SAFBQ15424 915 aaKnown RBP eCLIP21.27■■□□□ 1
CHRD-208ENST00000460627 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
CHRD-208ENST00000460627 RAD21O60216 631 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms