RNA–Protein interactions for RNA: ENST00000459988.1

UBAP2-208, Transcript of ubiquitin associated protein 2, humanhuman

TSL 2

Gene UBAP2, Length 2,628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-208ENST00000459988 ITGAEP38570 1179 aa9.54□□□□□ -0.88
UBAP2-208ENST00000459988 PIK3C2AO00443 1686 aa9.54□□□□□ -0.88
UBAP2-208ENST00000459988 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
UBAP2-208ENST00000459988 PDE3BQ13370 1112 aa9.53□□□□□ -0.88
UBAP2-208ENST00000459988 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
UBAP2-208ENST00000459988 NHSQ6T4R5 1651 aa9.53□□□□□ -0.88
UBAP2-208ENST00000459988 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
UBAP2-208ENST00000459988 ORAI2Q96SN7 254 aa9.53□□□□□ -0.88
UBAP2-208ENST00000459988 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.88
UBAP2-208ENST00000459988 CLTCL1P53675 1640 aa9.52□□□□□ -0.88
UBAP2-208ENST00000459988 TECPR2O15040 1411 aa9.52□□□□□ -0.89
UBAP2-208ENST00000459988 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
UBAP2-208ENST00000459988 PKD1L3Q7Z443 1732 aa9.51□□□□□ -0.89
UBAP2-208ENST00000459988 VIRMAQ69YN4 1812 aaKnown RBP9.51□□□□□ -0.89
UBAP2-208ENST00000459988 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
UBAP2-208ENST00000459988 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
UBAP2-208ENST00000459988 C16orf71Q8IYS4 520 aaPredicted RBP9.51□□□□□ -0.89
UBAP2-208ENST00000459988 LRRC37A3O60309 1634 aa9.5□□□□□ -0.89
UBAP2-208ENST00000459988 THSD7BQ9C0I4 1608 aa9.5□□□□□ -0.89
UBAP2-208ENST00000459988 PIAS4Q8N2W9 510 aaPredicted RBP9.5□□□□□ -0.89
UBAP2-208ENST00000459988 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
UBAP2-208ENST00000459988 IFT172Q9UG01 1749 aa9.5□□□□□ -0.89
UBAP2-208ENST00000459988 EP400Q96L91 3159 aa9.49□□□□□ -0.89
UBAP2-208ENST00000459988 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
UBAP2-208ENST00000459988 ADAMTS7Q9UKP4 1686 aa9.49□□□□□ -0.89
UBAP2-208ENST00000459988 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
UBAP2-208ENST00000459988 IGSF3O75054 1194 aa9.49□□□□□ -0.89
UBAP2-208ENST00000459988 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
UBAP2-208ENST00000459988 MYCNP04198 464 aaPredicted RBP9.48□□□□□ -0.89
UBAP2-208ENST00000459988 ZNF644Q9H582 1327 aaPredicted RBP9.48□□□□□ -0.89
UBAP2-208ENST00000459988 ANKARQ7Z5J8 1434 aa9.48□□□□□ -0.89
UBAP2-208ENST00000459988 YBX3P16989 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBAP2-208ENST00000459988 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
UBAP2-208ENST00000459988 METP08581 1390 aa9.48□□□□□ -0.89
UBAP2-208ENST00000459988 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
UBAP2-208ENST00000459988 PHRF1Q9P1Y6 1649 aaKnown RBP9.47□□□□□ -0.89
UBAP2-208ENST00000459988 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
UBAP2-208ENST00000459988 BTG4Q9NY30 223 aa9.47□□□□□ -0.89
UBAP2-208ENST00000459988 LMO7Q8WWI1 1683 aa9.46□□□□□ -0.89
UBAP2-208ENST00000459988 NAIPQ13075 1403 aa9.46□□□□□ -0.89
UBAP2-208ENST00000459988 KRT28Q7Z3Y7 464 aa9.46□□□□□ -0.9
UBAP2-208ENST00000459988 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.9
UBAP2-208ENST00000459988 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
UBAP2-208ENST00000459988 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
UBAP2-208ENST00000459988 DIEXFQ68CQ4 756 aaKnown RBP9.45□□□□□ -0.9
UBAP2-208ENST00000459988 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
UBAP2-208ENST00000459988 SIRT1Q96EB6 747 aa9.44□□□□□ -0.9
UBAP2-208ENST00000459988 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
UBAP2-208ENST00000459988 E9PCH4 1651 aa9.43□□□□□ -0.9
UBAP2-208ENST00000459988 TXNRD1Q16881 649 aa9.43□□□□□ -0.9
UBAP2-208ENST00000459988 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
UBAP2-208ENST00000459988 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
UBAP2-208ENST00000459988 TCP11L2Q8N4U5 519 aa9.42□□□□□ -0.9
UBAP2-208ENST00000459988 ARID3AQ99856 593 aa9.41□□□□□ -0.9
UBAP2-208ENST00000459988 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
UBAP2-208ENST00000459988 TUBGCP6Q96RT7 1819 aa9.41□□□□□ -0.9
UBAP2-208ENST00000459988 COL18A1P39060 1754 aa9.41□□□□□ -0.9
UBAP2-208ENST00000459988 DAPK1P53355 1430 aa9.4□□□□□ -0.9
UBAP2-208ENST00000459988 ROCK1Q13464 1354 aa9.4□□□□□ -0.9
UBAP2-208ENST00000459988 QRICH2Q9H0J4 1663 aa9.4□□□□□ -0.9
UBAP2-208ENST00000459988 PMFBP1Q8TBY8 1022 aa9.4□□□□□ -0.9
UBAP2-208ENST00000459988 CPDO75976 1380 aa9.4□□□□□ -0.91
UBAP2-208ENST00000459988 ARFGEF1Q9Y6D6 1849 aa9.39□□□□□ -0.91
UBAP2-208ENST00000459988 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
UBAP2-208ENST00000459988 FOXO3O43524 673 aa9.39□□□□□ -0.91
UBAP2-208ENST00000459988 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
UBAP2-208ENST00000459988 KIAA0232Q92628 1395 aa9.39□□□□□ -0.91
UBAP2-208ENST00000459988 FOXN1O15353 648 aa9.38□□□□□ -0.91
UBAP2-208ENST00000459988 SLC27A3Q5K4L6 730 aa9.38□□□□□ -0.91
UBAP2-208ENST00000459988 PROM2Q8N271 834 aa9.38□□□□□ -0.91
UBAP2-208ENST00000459988 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
UBAP2-208ENST00000459988 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
UBAP2-208ENST00000459988 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
UBAP2-208ENST00000459988 CNTNAP1P78357 1384 aa9.37□□□□□ -0.91
UBAP2-208ENST00000459988 ABCC6O95255 1503 aa9.37□□□□□ -0.91
UBAP2-208ENST00000459988 KIF1BO60333 1816 aa9.37□□□□□ -0.91
UBAP2-208ENST00000459988 RPGRIP1LQ68CZ1 1315 aa9.36□□□□□ -0.91
UBAP2-208ENST00000459988 PPLO60437 1756 aa9.36□□□□□ -0.91
UBAP2-208ENST00000459988 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
UBAP2-208ENST00000459988 NLGN2Q8NFZ4 835 aa9.36□□□□□ -0.91
UBAP2-208ENST00000459988 DLL1O00548 723 aa9.35□□□□□ -0.91
UBAP2-208ENST00000459988 AKT1S1Q96B36 256 aa9.35□□□□□ -0.91
UBAP2-208ENST00000459988 RNF216Q9NWF9 866 aaPredicted RBP9.35□□□□□ -0.91
UBAP2-208ENST00000459988 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
UBAP2-208ENST00000459988 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
UBAP2-208ENST00000459988 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
UBAP2-208ENST00000459988 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
UBAP2-208ENST00000459988 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
UBAP2-208ENST00000459988 CRB1P82279 1406 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 SIN3AQ96ST3 1273 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 PDGFDQ9GZP0 370 aaPredicted RBP9.34□□□□□ -0.91
UBAP2-208ENST00000459988 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 CHIC2Q9UKJ5 165 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 USP54Q70EL1 1684 aa9.34□□□□□ -0.91
UBAP2-208ENST00000459988 LY75O60449 1722 aa9.33□□□□□ -0.92
UBAP2-208ENST00000459988 MAP2K1Q02750 393 aaPredicted RBP9.33□□□□□ -0.92
UBAP2-208ENST00000459988 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
UBAP2-208ENST00000459988 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms