RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 PLCD4Q9BRC7 762 aa8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 RRAGDQ9NQL2 400 aaPredicted RBP8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 KIF20BQ96Q89 1820 aa8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 CDC42BPGQ6DT37 1551 aa8.71□□□□□ -1.01
CUBNP3-201ENST00000457461 NSD3Q9BZ95 1437 aa8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 ABCB7O75027 752 aa8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 LETM1O95202 739 aaPredicted RBP8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 CABP2Q9NPB3 220 aa8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 A0A1W2PP64 1363 aa8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 NSD2O96028 1365 aa8.71□□□□□ -1.02
CUBNP3-201ENST00000457461 NALCNQ8IZF0 1738 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 FMN2Q9NZ56 1722 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 KDM4FA0A1W2PPD8 638 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 WASLO00401 505 aaPredicted RBP8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 FAM193AP78312 1265 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 SLC12A5Q9H2X9 1139 aa8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 CPSF1Q10570 1443 aaKnown RBP8.7□□□□□ -1.02
CUBNP3-201ENST00000457461 NRKQ7Z2Y5 1582 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 INSRP06213 1382 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 PPP4R3BQ5MIZ7 849 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 FRAT1Q92837 279 aaPredicted RBP8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 MRS2Q9HD23 443 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 LMTK3Q96Q04 1460 aa8.69□□□□□ -1.02
CUBNP3-201ENST00000457461 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
CUBNP3-201ENST00000457461 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
CUBNP3-201ENST00000457461 STRCQ7RTU9 1775 aa8.68□□□□□ -1.02
CUBNP3-201ENST00000457461 CC2D1BQ5T0F9 858 aaKnown RBP8.68□□□□□ -1.02
CUBNP3-201ENST00000457461 PSEN1P49768 467 aa8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 WWC1Q8IX03 1113 aa8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 PNISRQ8TF01 805 aaKnown RBP8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 STRCP1A6NGW2 1772 aa8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 NKTRP30414 1462 aaKnown RBP8.67□□□□□ -1.02
CUBNP3-201ENST00000457461 PPIP5K1Q6PFW1 1433 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 PRR36Q9H6K5 1346 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 KCNA6P17658 529 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 PPP2R1AP30153 589 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 KCNG1Q9UIX4 513 aa8.66□□□□□ -1.02
CUBNP3-201ENST00000457461 EDC4Q6P2E9 1401 aaKnown RBP8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 ADGRL3Q9HAR2 1447 aa8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 SHPRHQ149N8 1683 aa8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 NUDT16Q96DE0 195 aaKnown RBP8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 GEMIN8Q9NWZ8 242 aaKnown RBP8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
CUBNP3-201ENST00000457461 USP54Q70EL1 1684 aa8.64□□□□□ -1.03
CUBNP3-201ENST00000457461 CABP1Q9NZU7 370 aa8.64□□□□□ -1.03
CUBNP3-201ENST00000457461 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
CUBNP3-201ENST00000457461 BLMP54132 1417 aaPredicted RBP8.64□□□□□ -1.03
CUBNP3-201ENST00000457461 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 HDGFL2Q7Z4V5 671 aaPredicted RBP8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 POLR3AO14802 1390 aaPredicted RBP8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 SSH2Q76I76 1423 aa8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 NFKBIBQ15653 356 aa8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 PSMD1Q99460 953 aa8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 ISY1Q9ULR0 285 aaKnown RBP8.63□□□□□ -1.03
CUBNP3-201ENST00000457461 XIRP1Q702N8 1843 aaKnown RBP8.62□□□□□ -1.03
CUBNP3-201ENST00000457461 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
CUBNP3-201ENST00000457461 NCOA3Q9Y6Q9 1424 aa8.62□□□□□ -1.03
CUBNP3-201ENST00000457461 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
CUBNP3-201ENST00000457461 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 FYB1O15117 783 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 IRX6P78412 446 aaPredicted RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 ZBED9Q6R2W3 1325 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 USP6P35125 1406 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 LRRC7Q96NW7 1537 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 MARF1Q9Y4F3 1742 aaKnown RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 SMG6Q86US8 1419 aaKnown RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 MS4A1P11836 297 aa8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 ZNF692Q9BU19 519 aaPredicted RBP8.61□□□□□ -1.03
CUBNP3-201ENST00000457461 HNRNPUQ00839 825 aaKnown RBP eCLIP8.6□□□□□ -1.03
CUBNP3-201ENST00000457461 MORC1Q86VD1 984 aa8.6□□□□□ -1.03
CUBNP3-201ENST00000457461 TSPYL1Q9H0U9 437 aa8.6□□□□□ -1.03
CUBNP3-201ENST00000457461 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
CUBNP3-201ENST00000457461 OVOS2A0A0J9YW53 1432 aa8.59□□□□□ -1.03
CUBNP3-201ENST00000457461 DCCP43146 1447 aa8.59□□□□□ -1.03
CUBNP3-201ENST00000457461 OVOS2Q6IE36 1432 aa8.59□□□□□ -1.03
CUBNP3-201ENST00000457461 ZSCAN20P17040 1043 aaPredicted RBP8.59□□□□□ -1.03
CUBNP3-201ENST00000457461 ZNF592Q92610 1267 aa8.59□□□□□ -1.03
CUBNP3-201ENST00000457461 ACEP12821 1306 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 KIF1AQ12756 1690 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 APPP05067 770 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 AATKQ6ZMQ8 1374 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 PNPLA6Q8IY17 1366 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 HSPA2P54652 639 aa8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 DNTTIP2Q5QJE6 756 aaKnown RBP8.58□□□□□ -1.04
CUBNP3-201ENST00000457461 MAFGO15525 162 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms