RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 VGLL3A8MV65 326 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 PATL2C9JE40 543 aaKnown RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 GOLGA6L19H0YKK7 550 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 MEX3CQ5U5Q3 659 aaKnown RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 HDGFL2Q7Z4V5 671 aaPredicted RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 CCDC112Q8NEF3 446 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 SMC3Q9UQE7 1217 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 ZNF521Q96K83 1311 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 SMARCA5O60264 1052 aaPredicted RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 PKP1Q13835 747 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 C16orf45Q96MC5 204 aaPredicted RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 CABP2Q9NPB3 220 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 DIP2BQ9P265 1576 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 BECN2A8MW95 431 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 ERC2O15083 957 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 CT47B1P0C2W7 299 aaPredicted RBP7.42□□□□□ -1.22
BDNF-210ENST00000438929 FBXW7Q969H0 707 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 BCORL1Q5H9F3 1711 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 PRAG1Q86YV5 1406 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 PRKAR2BP31323 418 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 ZNF445P59923 1031 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 EFCAB2Q5VUJ9 269 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 FAM184AQ8NB25 1140 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 TERF2IPQ9NYB0 399 aa7.42□□□□□ -1.22
BDNF-210ENST00000438929 SPAG9O60271 1321 aaKnown RBP7.41□□□□□ -1.22
BDNF-210ENST00000438929 HTATSF1O43719 755 aaKnown RBP7.41□□□□□ -1.22
BDNF-210ENST00000438929 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.41□□□□□ -1.22
BDNF-210ENST00000438929 IPO4Q8TEX9 1081 aaKnown RBP7.41□□□□□ -1.22
BDNF-210ENST00000438929 ZNF500O60304 480 aaPredicted RBP7.41□□□□□ -1.22
BDNF-210ENST00000438929 LETM1O95202 739 aaPredicted RBP7.41□□□□□ -1.22
BDNF-210ENST00000438929 U2AF2P26368 475 aaKnown RBP eCLIP7.41□□□□□ -1.22
BDNF-210ENST00000438929 CNPY4Q8N129 248 aa7.41□□□□□ -1.22
BDNF-210ENST00000438929 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
BDNF-210ENST00000438929 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
BDNF-210ENST00000438929 BICD2Q8TD16 824 aa7.41□□□□□ -1.22
BDNF-210ENST00000438929 LMBRD1Q9NUN5 540 aa7.41□□□□□ -1.22
BDNF-210ENST00000438929 TWISTNBQ3B726 338 aaPredicted RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 JARID2Q92833 1246 aaPredicted RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 LARP6Q9BRS8 491 aaKnown RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 GTPBP4Q9BZE4 634 aaKnown RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 BCCIPQ9P287 314 aaKnown RBP eCLIP7.4□□□□□ -1.22
BDNF-210ENST00000438929 UHRF1BP1Q6BDS2 1440 aa7.4□□□□□ -1.22
BDNF-210ENST00000438929 WDR33Q9C0J8 1336 aaKnown RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 TRMT2AQ8IZ69 625 aaKnown RBP7.4□□□□□ -1.22
BDNF-210ENST00000438929 EVC2Q86UK5 1308 aa7.4□□□□□ -1.23
BDNF-210ENST00000438929 APPP05067 770 aa7.4□□□□□ -1.23
BDNF-210ENST00000438929 MCM2P49736 904 aa7.4□□□□□ -1.23
BDNF-210ENST00000438929 GNAI1P63096 354 aa7.4□□□□□ -1.23
BDNF-210ENST00000438929 C16orf71Q8IYS4 520 aaPredicted RBP7.4□□□□□ -1.23
BDNF-210ENST00000438929 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.23
BDNF-210ENST00000438929 MINK1Q8N4C8 1332 aaPredicted RBP7.39□□□□□ -1.23
BDNF-210ENST00000438929 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
BDNF-210ENST00000438929 CCAR2Q8N163 923 aaKnown RBP7.39□□□□□ -1.23
BDNF-210ENST00000438929 NECTIN2Q92692 538 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 ZBTB40Q9NUA8 1239 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 TPM3P06753 285 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 CCDC192P0DO97 292 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 HOMER1Q86YM7 354 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 AEBP1Q8IUX7 1158 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 MAGI3Q5TCQ9 1506 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 KIF14Q15058 1648 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 MAP3K4Q9Y6R4 1608 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 COL17A1Q9UMD9 1497 aaPredicted RBP7.39□□□□□ -1.23
BDNF-210ENST00000438929 KDM5CP41229 1560 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 KIF20AO95235 890 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 CAMK4Q16566 473 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 TAF3Q5VWG9 929 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 TMX3Q96JJ7 454 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 STK31Q9BXU1 1019 aa7.39□□□□□ -1.23
BDNF-210ENST00000438929 GORABQ5T7V8 394 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
BDNF-210ENST00000438929 TSHZ3Q63HK5 1081 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 TNNT1P13805 278 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 DMTNQ08495 405 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 LMOD3Q0VAK6 560 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 CCDC183Q5T5S1 534 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 FILIP1Q7Z7B0 1213 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.38□□□□□ -1.23
BDNF-210ENST00000438929 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
BDNF-210ENST00000438929 ASXL1Q8IXJ9 1541 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 SCAPERQ9BY12 1400 aa7.38□□□□□ -1.23
BDNF-210ENST00000438929 NUP153P49790 1475 aaKnown RBP7.38□□□□□ -1.23
BDNF-210ENST00000438929 TEX35Q5T0J7 233 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 EXOC6BQ9Y2D4 811 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 RAPGEF6Q8TEU7 1601 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 GPT2Q8TD30 523 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 FBXO3Q9UK99 471 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 PIK3C2GO75747 1445 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 INSRP06213 1382 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 RIOK3O14730 519 aaKnown RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 MAP4K4O95819 1239 aaPredicted RBP7.37□□□□□ -1.23
BDNF-210ENST00000438929 SDSP20132 328 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 USP48Q86UV5 1035 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 GCC2Q8IWJ2 1684 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 FAM69CQ0P6D2 419 aa7.37□□□□□ -1.23
BDNF-210ENST00000438929 AFAP1Q8N556 730 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms