RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
BDNF-210ENST00000438929 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
BDNF-210ENST00000438929 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
BDNF-210ENST00000438929 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
BDNF-210ENST00000438929 HRCP23327 699 aa10.06□□□□□ -0.8
BDNF-210ENST00000438929 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
BDNF-210ENST00000438929 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
BDNF-210ENST00000438929 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.82
BDNF-210ENST00000438929 MYT1Q01538 1121 aa9.88□□□□□ -0.83
BDNF-210ENST00000438929 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
BDNF-210ENST00000438929 EHMT2Q96KQ7 1210 aa9.77□□□□□ -0.85
BDNF-210ENST00000438929 CHIC1Q5VXU3 224 aa9.68□□□□□ -0.86
BDNF-210ENST00000438929 LOC105371045A0A1W2PR82 267 aa9.65□□□□□ -0.86
BDNF-210ENST00000438929 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
BDNF-210ENST00000438929 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
BDNF-210ENST00000438929 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
BDNF-210ENST00000438929 CENPBP07199 599 aaPredicted RBP9.59□□□□□ -0.87
BDNF-210ENST00000438929 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
BDNF-210ENST00000438929 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
BDNF-210ENST00000438929 TTBK1Q5TCY1 1321 aaPredicted RBP9.5□□□□□ -0.89
BDNF-210ENST00000438929 ABCC9O60706 1549 aa9.5□□□□□ -0.89
BDNF-210ENST00000438929 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
BDNF-210ENST00000438929 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
BDNF-210ENST00000438929 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
BDNF-210ENST00000438929 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
BDNF-210ENST00000438929 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
BDNF-210ENST00000438929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
BDNF-210ENST00000438929 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
BDNF-210ENST00000438929 NEUROD1Q13562 356 aa9.34□□□□□ -0.91
BDNF-210ENST00000438929 SLC24A1O60721 1099 aa9.3□□□□□ -0.92
BDNF-210ENST00000438929 UNC13AQ9UPW8 1703 aa9.28□□□□□ -0.92
BDNF-210ENST00000438929 ERICH6Q7L0X2 663 aa9.27□□□□□ -0.92
BDNF-210ENST00000438929 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
BDNF-210ENST00000438929 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
BDNF-210ENST00000438929 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
BDNF-210ENST00000438929 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
BDNF-210ENST00000438929 NACADO15069 1562 aa9.17□□□□□ -0.94
BDNF-210ENST00000438929 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
BDNF-210ENST00000438929 APLP2Q06481 763 aa9.11□□□□□ -0.95
BDNF-210ENST00000438929 RANGAP1P46060 587 aaPredicted RBP9.09□□□□□ -0.95
BDNF-210ENST00000438929 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
BDNF-210ENST00000438929 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
BDNF-210ENST00000438929 ZNF316A6NFI3 1004 aaPredicted RBP9.08□□□□□ -0.96
BDNF-210ENST00000438929 BCANQ96GW7 911 aa9.04□□□□□ -0.96
BDNF-210ENST00000438929 NEFLP07196 543 aa9.02□□□□□ -0.97
BDNF-210ENST00000438929 MIER1Q8N108 512 aa9□□□□□ -0.97
BDNF-210ENST00000438929 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
BDNF-210ENST00000438929 SCRIBQ14160 1630 aa8.96□□□□□ -0.98
BDNF-210ENST00000438929 ANP32EQ9BTT0 268 aa8.9□□□□□ -0.99
BDNF-210ENST00000438929 ITGAEP38570 1179 aa8.87□□□□□ -0.99
BDNF-210ENST00000438929 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
BDNF-210ENST00000438929 PABPN1Q86U42 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
BDNF-210ENST00000438929 FKBP8Q14318 412 aa8.84□□□□□ -0.99
BDNF-210ENST00000438929 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
BDNF-210ENST00000438929 CLSPNQ9HAW4 1339 aa8.79□□□□□ -1
BDNF-210ENST00000438929 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
BDNF-210ENST00000438929 EIF5BO60841 1220 aaKnown RBP8.76□□□□□ -1.01
BDNF-210ENST00000438929 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
BDNF-210ENST00000438929 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
BDNF-210ENST00000438929 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
BDNF-210ENST00000438929 CDK11AQ9UQ88 783 aaPredicted RBP8.73□□□□□ -1.01
BDNF-210ENST00000438929 EIF4G1Q04637 1599 aaKnown RBP8.73□□□□□ -1.01
BDNF-210ENST00000438929 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
BDNF-210ENST00000438929 CC2D2AQ9P2K1 1620 aa8.7□□□□□ -1.02
BDNF-210ENST00000438929 RTL5Q5HYW3 569 aaPredicted RBP8.7□□□□□ -1.02
BDNF-210ENST00000438929 DDX10Q13206 875 aaKnown RBP8.69□□□□□ -1.02
BDNF-210ENST00000438929 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
BDNF-210ENST00000438929 CECR2Q9BXF3 1484 aa8.67□□□□□ -1.02
BDNF-210ENST00000438929 ANP32CO43423 234 aa8.67□□□□□ -1.02
BDNF-210ENST00000438929 RSF1Q96T23 1441 aaPredicted RBP8.67□□□□□ -1.02
BDNF-210ENST00000438929 MYT1LQ9UL68 1186 aa8.67□□□□□ -1.02
BDNF-210ENST00000438929 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
BDNF-210ENST00000438929 NBR1Q14596 966 aa8.65□□□□□ -1.02
BDNF-210ENST00000438929 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
BDNF-210ENST00000438929 CEP162Q5TB80 1403 aa8.64□□□□□ -1.03
BDNF-210ENST00000438929 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
BDNF-210ENST00000438929 SMARCA4P51532 1647 aa8.6□□□□□ -1.03
BDNF-210ENST00000438929 HNRNPUQ00839 825 aaKnown RBP eCLIP8.59□□□□□ -1.03
BDNF-210ENST00000438929 FAM50AQ14320 339 aaKnown RBP8.59□□□□□ -1.04
BDNF-210ENST00000438929 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
BDNF-210ENST00000438929 MROH2BQ7Z745 1585 aa8.58□□□□□ -1.04
BDNF-210ENST00000438929 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
BDNF-210ENST00000438929 PEG3Q9GZU2 1588 aa8.57□□□□□ -1.04
BDNF-210ENST00000438929 BAZ1AQ9NRL2 1556 aaPredicted RBP8.54□□□□□ -1.04
BDNF-210ENST00000438929 DEKP35659 375 aaKnown RBP8.53□□□□□ -1.04
BDNF-210ENST00000438929 ANP32AP39687 249 aaKnown RBP8.53□□□□□ -1.04
BDNF-210ENST00000438929 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
BDNF-210ENST00000438929 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
BDNF-210ENST00000438929 WIZO95785 1651 aa8.52□□□□□ -1.05
BDNF-210ENST00000438929 TNIKQ9UKE5 1360 aa8.52□□□□□ -1.05
BDNF-210ENST00000438929 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
BDNF-210ENST00000438929 CLIP1P30622 1438 aa8.5□□□□□ -1.05
BDNF-210ENST00000438929 ATAD2BQ9ULI0 1458 aa8.5□□□□□ -1.05
BDNF-210ENST00000438929 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
BDNF-210ENST00000438929 SOGA1O94964 1423 aa8.48□□□□□ -1.05
BDNF-210ENST00000438929 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
BDNF-210ENST00000438929 ZBTB47Q9UFB7 747 aaPredicted RBP8.47□□□□□ -1.05
BDNF-210ENST00000438929 NCAPD3P42695 1498 aa8.47□□□□□ -1.05
BDNF-210ENST00000438929 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
BDNF-210ENST00000438929 SIN3AQ96ST3 1273 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms