RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 TBC1D2BQ9UPU7 963 aa8.56□□□□□ -1.04
NIPAL3-205ENST00000432012 CCDC18Q5T9S5 1454 aa8.56□□□□□ -1.04
NIPAL3-205ENST00000432012 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
NIPAL3-205ENST00000432012 TXNDC2Q86VQ3 553 aa8.56□□□□□ -1.04
NIPAL3-205ENST00000432012 MS4A3Q96HJ5 214 aa8.56□□□□□ -1.04
NIPAL3-205ENST00000432012 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 DIP2AQ14689 1571 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 RFC5P40937 340 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
NIPAL3-205ENST00000432012 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
NIPAL3-205ENST00000432012 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
NIPAL3-205ENST00000432012 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
NIPAL3-205ENST00000432012 SND1Q7KZF4 910 aaKnown RBP eCLIP8.54□□□□□ -1.04
NIPAL3-205ENST00000432012 PTGDRQ13258 359 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 AMOTL2Q9Y2J4 779 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 ERVK-7P63135 1459 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 MROH1Q8NDA8 1641 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 NCOA2Q15596 1464 aa8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 DHX57Q6P158 1386 aaKnown RBP8.53□□□□□ -1.04
NIPAL3-205ENST00000432012 SETD5Q9C0A6 1442 aa8.52□□□□□ -1.04
NIPAL3-205ENST00000432012 FCHSD2O94868 740 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 CDCA8Q53HL2 280 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 PBXIP1Q96AQ6 731 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 TRPC5Q9UL62 973 aaPredicted RBP8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 TBC1D12O60347 775 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 KCNA1Q09470 495 aa8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.05
NIPAL3-205ENST00000432012 UNC13BO14795 1591 aa8.51□□□□□ -1.05
NIPAL3-205ENST00000432012 KIF3BO15066 747 aa8.51□□□□□ -1.05
NIPAL3-205ENST00000432012 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
NIPAL3-205ENST00000432012 GPATCH8Q9UKJ3 1502 aaKnown RBP8.51□□□□□ -1.05
NIPAL3-205ENST00000432012 SUPT16HQ9Y5B9 1047 aaKnown RBP8.51□□□□□ -1.05
NIPAL3-205ENST00000432012 LTKP29376 864 aa8.5□□□□□ -1.05
NIPAL3-205ENST00000432012 CDHR5Q9HBB8 845 aa8.5□□□□□ -1.05
NIPAL3-205ENST00000432012 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
NIPAL3-205ENST00000432012 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
NIPAL3-205ENST00000432012 LRRC59Q96AG4 307 aaKnown RBP8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 TET3O43151 1660 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 TMEM2Q9UHN6 1383 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 SPHKAPQ2M3C7 1700 aa8.49□□□□□ -1.05
NIPAL3-205ENST00000432012 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
NIPAL3-205ENST00000432012 ATF3P18847 181 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 ATRNO75882 1429 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 PTCH1Q13635 1447 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 LRRIQ1Q96JM4 1722 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 CLK2P49760 499 aaKnown RBP8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 NOM1Q5C9Z4 860 aaKnown RBP8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 DPY19L2Q6NUT2 758 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 PSMD1Q99460 953 aa8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
NIPAL3-205ENST00000432012 PPP1R1BQ9UD71 204 aaPredicted RBP8.46□□□□□ -1.05
NIPAL3-205ENST00000432012 DCCP43146 1447 aa8.46□□□□□ -1.06
NIPAL3-205ENST00000432012 CHD2O14647 1828 aaKnown RBP8.46□□□□□ -1.06
NIPAL3-205ENST00000432012 BCL9LQ86UU0 1499 aa8.46□□□□□ -1.06
NIPAL3-205ENST00000432012 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.06
NIPAL3-205ENST00000432012 TMEM88BA6NKF7 163 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 TTLL13PA6NNM8 815 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 GALR2O43603 387 aaPredicted RBP8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 EVX2Q03828 476 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 C19orf44Q9H6X5 657 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 USP21Q9UK80 565 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 EIF2AK4Q9P2K8 1649 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 CLCN1P35523 988 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 ARHGAP35Q9NRY4 1499 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 EFCAB6Q5THR3 1501 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
NIPAL3-205ENST00000432012 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.44□□□□□ -1.06
NIPAL3-205ENST00000432012 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
NIPAL3-205ENST00000432012 CCNB3Q8WWL7 1395 aa8.44□□□□□ -1.06
NIPAL3-205ENST00000432012 ZNF662Q6ZS27 426 aa8.44□□□□□ -1.06
NIPAL3-205ENST00000432012 NPDC1Q9NQX5 325 aaPredicted RBP8.44□□□□□ -1.06
NIPAL3-205ENST00000432012 PNPLA6Q8IY17 1366 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 CASKIN1Q8WXD9 1431 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 ASXL1Q8IXJ9 1541 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 KANK4Q5T7N3 995 aaPredicted RBP8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 PLPP6Q8IY26 295 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 USTQ9Y2C2 406 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
NIPAL3-205ENST00000432012 BAG6P46379 1132 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 MAP3K9P80192 1104 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 QPCTQ16769 361 aa8.42□□□□□ -1.06
NIPAL3-205ENST00000432012 TICAM2Q86XR7 235 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms