RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TNPO1Q92973 898 aaKnown RBP17.98■□□□□ 0.47
ERCC3-202ENST00000426778 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
ERCC3-202ENST00000426778 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
ERCC3-202ENST00000426778 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
ERCC3-202ENST00000426778 KIF2CQ99661 725 aa17.98■□□□□ 0.47
ERCC3-202ENST00000426778 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
ERCC3-202ENST00000426778 TMEM131LA2VDJ0 1609 aa17.97■□□□□ 0.47
ERCC3-202ENST00000426778 IL13P35225 146 aa17.96■□□□□ 0.47
ERCC3-202ENST00000426778 OTUD7AQ8TE49 926 aaPredicted RBP17.96■□□□□ 0.47
ERCC3-202ENST00000426778 ARHGEF40Q8TER5 1519 aa17.96■□□□□ 0.47
ERCC3-202ENST00000426778 ALKQ9UM73 1620 aa17.96■□□□□ 0.47
ERCC3-202ENST00000426778 CFAP74Q9C0B2 1584 aa17.96■□□□□ 0.47
ERCC3-202ENST00000426778 RBM25P49756 843 aaKnown RBP17.95■□□□□ 0.46
ERCC3-202ENST00000426778 GNAI1P63096 354 aa17.95■□□□□ 0.46
ERCC3-202ENST00000426778 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
ERCC3-202ENST00000426778 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
ERCC3-202ENST00000426778 PREX1Q8TCU6 1659 aa17.94■□□□□ 0.46
ERCC3-202ENST00000426778 AK9Q5TCS8 1911 aa17.94■□□□□ 0.46
ERCC3-202ENST00000426778 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
ERCC3-202ENST00000426778 MCM10Q7L590 875 aa17.94■□□□□ 0.46
ERCC3-202ENST00000426778 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
ERCC3-202ENST00000426778 GSPT1P15170 499 aaKnown RBP17.93■□□□□ 0.46
ERCC3-202ENST00000426778 ARHGAP31Q2M1Z3 1444 aa17.93■□□□□ 0.46
ERCC3-202ENST00000426778 FSD2A1L4K1 749 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 GAS2L2Q8NHY3 880 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 KIF20BQ96Q89 1820 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 SSFA2P28290 1259 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 COG3Q96JB2 828 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
ERCC3-202ENST00000426778 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
ERCC3-202ENST00000426778 GAS2L3Q86XJ1 694 aa17.91■□□□□ 0.46
ERCC3-202ENST00000426778 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
ERCC3-202ENST00000426778 WASLO00401 505 aaPredicted RBP17.91■□□□□ 0.46
ERCC3-202ENST00000426778 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
ERCC3-202ENST00000426778 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
ERCC3-202ENST00000426778 NEO1Q92859 1461 aa17.91■□□□□ 0.46
ERCC3-202ENST00000426778 FAM69CQ0P6D2 419 aa17.9■□□□□ 0.46
ERCC3-202ENST00000426778 MED14O60244 1454 aa17.9■□□□□ 0.46
ERCC3-202ENST00000426778 DDIT3P35638 169 aa17.89■□□□□ 0.46
ERCC3-202ENST00000426778 CFAP44Q96MT7 982 aa17.89■□□□□ 0.46
ERCC3-202ENST00000426778 RICTORQ6R327 1708 aa17.89■□□□□ 0.45
ERCC3-202ENST00000426778 METP08581 1390 aa17.89■□□□□ 0.45
ERCC3-202ENST00000426778 ABCC4O15439 1325 aa17.89■□□□□ 0.45
ERCC3-202ENST00000426778 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
ERCC3-202ENST00000426778 PLPPR3Q6T4P5 718 aa17.88■□□□□ 0.45
ERCC3-202ENST00000426778 GRPEL1Q9HAV7 217 aa17.88■□□□□ 0.45
ERCC3-202ENST00000426778 DDX11L8A8MPP1 907 aa17.88■□□□□ 0.45
ERCC3-202ENST00000426778 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
ERCC3-202ENST00000426778 K7ELQ4 463 aaPredicted RBP17.87■□□□□ 0.45
ERCC3-202ENST00000426778 SNX21Q969T3 373 aa17.87■□□□□ 0.45
ERCC3-202ENST00000426778 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
ERCC3-202ENST00000426778 CPS1P31327 1500 aa17.86■□□□□ 0.45
ERCC3-202ENST00000426778 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
ERCC3-202ENST00000426778 CLTCQ00610 1675 aaKnown RBP17.86■□□□□ 0.45
ERCC3-202ENST00000426778 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
ERCC3-202ENST00000426778 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
ERCC3-202ENST00000426778 RIMS2Q9UQ26 1411 aa17.86■□□□□ 0.45
ERCC3-202ENST00000426778 FOXO3O43524 673 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
ERCC3-202ENST00000426778 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 NCOA3Q9Y6Q9 1424 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 CDC45O75419 566 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 PKP1Q13835 747 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 HSP90AB2PQ58FF8 381 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 MEIS3Q99687 375 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 F6X3S4 739 aa17.85■□□□□ 0.45
ERCC3-202ENST00000426778 BRPF1P55201 1214 aaPredicted RBP17.84■□□□□ 0.45
ERCC3-202ENST00000426778 EIF4A2Q14240 407 aaKnown RBP17.84■□□□□ 0.45
ERCC3-202ENST00000426778 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
ERCC3-202ENST00000426778 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
ERCC3-202ENST00000426778 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
ERCC3-202ENST00000426778 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
ERCC3-202ENST00000426778 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
ERCC3-202ENST00000426778 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.45
ERCC3-202ENST00000426778 ZNF428Q96B54 188 aa17.83■□□□□ 0.45
ERCC3-202ENST00000426778 NAP1L5Q96NT1 182 aaPredicted RBP17.83■□□□□ 0.45
ERCC3-202ENST00000426778 MRE11P49959 708 aa17.83■□□□□ 0.44
ERCC3-202ENST00000426778 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
ERCC3-202ENST00000426778 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.44
ERCC3-202ENST00000426778 NCLP19338 710 aaKnown RBP17.82■□□□□ 0.44
ERCC3-202ENST00000426778 KNDC1Q76NI1 1749 aa17.82■□□□□ 0.44
ERCC3-202ENST00000426778 A2ML1A8K2U0 1454 aa17.82■□□□□ 0.44
ERCC3-202ENST00000426778 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
ERCC3-202ENST00000426778 PIK3R4Q99570 1358 aa17.82■□□□□ 0.44
ERCC3-202ENST00000426778 MSH6P52701 1360 aa17.81■□□□□ 0.44
ERCC3-202ENST00000426778 G2E3Q7L622 706 aa17.81■□□□□ 0.44
ERCC3-202ENST00000426778 EDC4Q6P2E9 1401 aaKnown RBP17.81■□□□□ 0.44
ERCC3-202ENST00000426778 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
ERCC3-202ENST00000426778 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
ERCC3-202ENST00000426778 DCTPP1Q9H773 170 aa17.81■□□□□ 0.44
ERCC3-202ENST00000426778 ATP7BP35670 1465 aa17.8■□□□□ 0.44
ERCC3-202ENST00000426778 SDSP20132 328 aa17.8■□□□□ 0.44
ERCC3-202ENST00000426778 CPSF1Q10570 1443 aaKnown RBP17.8■□□□□ 0.44
ERCC3-202ENST00000426778 CDC42BPGQ6DT37 1551 aa17.8■□□□□ 0.44
ERCC3-202ENST00000426778 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
ERCC3-202ENST00000426778 CEP85Q6P2H3 762 aa17.79■□□□□ 0.44
ERCC3-202ENST00000426778 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms