RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 PDE3AQ14432 1141 aa17.6■□□□□ 0.41
SEC13-203ENST00000383801 AMPHP49418 695 aa17.59■□□□□ 0.41
SEC13-203ENST00000383801 AAMPQ13685 434 aa17.59■□□□□ 0.41
SEC13-203ENST00000383801 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
SEC13-203ENST00000383801 MARF1Q9Y4F3 1742 aaKnown RBP17.59■□□□□ 0.41
SEC13-203ENST00000383801 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.41
SEC13-203ENST00000383801 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.41
SEC13-203ENST00000383801 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.41
SEC13-203ENST00000383801 HMOX1P09601 288 aa17.57■□□□□ 0.4
SEC13-203ENST00000383801 ATF3P18847 181 aa17.57■□□□□ 0.4
SEC13-203ENST00000383801 KDRP35968 1356 aa17.57■□□□□ 0.4
SEC13-203ENST00000383801 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
SEC13-203ENST00000383801 HSP90AB2PQ58FF8 381 aa17.56■□□□□ 0.4
SEC13-203ENST00000383801 TMEM94Q12767 1356 aa17.56■□□□□ 0.4
SEC13-203ENST00000383801 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
SEC13-203ENST00000383801 MS4A1P11836 297 aa17.56■□□□□ 0.4
SEC13-203ENST00000383801 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
SEC13-203ENST00000383801 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
SEC13-203ENST00000383801 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
SEC13-203ENST00000383801 GNAI1P63096 354 aa17.55■□□□□ 0.4
SEC13-203ENST00000383801 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
SEC13-203ENST00000383801 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
SEC13-203ENST00000383801 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
SEC13-203ENST00000383801 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
SEC13-203ENST00000383801 RBM33Q96EV2 1170 aaKnown RBP17.54■□□□□ 0.4
SEC13-203ENST00000383801 STRCP1A6NGW2 1772 aa17.53■□□□□ 0.4
SEC13-203ENST00000383801 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
SEC13-203ENST00000383801 HOXC9P31274 260 aa17.53■□□□□ 0.4
SEC13-203ENST00000383801 IP6K1Q92551 441 aa17.53■□□□□ 0.4
SEC13-203ENST00000383801 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
SEC13-203ENST00000383801 STRCQ7RTU9 1775 aa17.52■□□□□ 0.4
SEC13-203ENST00000383801 MSH6P52701 1360 aa17.52■□□□□ 0.4
SEC13-203ENST00000383801 PLIN1O60240 522 aa17.52■□□□□ 0.4
SEC13-203ENST00000383801 SLIT3O75094 1523 aa17.52■□□□□ 0.39
SEC13-203ENST00000383801 HTATSF1O43719 755 aaKnown RBP17.51■□□□□ 0.39
SEC13-203ENST00000383801 ZNF853P0CG23 659 aa17.51■□□□□ 0.39
SEC13-203ENST00000383801 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
SEC13-203ENST00000383801 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
SEC13-203ENST00000383801 ALDH1L2Q3SY69 923 aa17.51■□□□□ 0.39
SEC13-203ENST00000383801 KRT28Q7Z3Y7 464 aa17.51■□□□□ 0.39
SEC13-203ENST00000383801 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
SEC13-203ENST00000383801 NFAT5O94916 1531 aa17.51■□□□□ 0.39
SEC13-203ENST00000383801 DLG5Q8TDM6 1919 aa17.51■□□□□ 0.39
SEC13-203ENST00000383801 FOXO3O43524 673 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 BCAR3O75815 825 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 HSPA2P54652 639 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 CFAP44Q96MT7 982 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
SEC13-203ENST00000383801 USP19O94966 1318 aa17.49■□□□□ 0.39
SEC13-203ENST00000383801 EYA1Q99502 592 aa17.49■□□□□ 0.39
SEC13-203ENST00000383801 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
SEC13-203ENST00000383801 LTN1O94822 1766 aa17.48■□□□□ 0.39
SEC13-203ENST00000383801 EXOSC9Q06265 439 aaKnown RBP17.48■□□□□ 0.39
SEC13-203ENST00000383801 SOX12O15370 315 aa17.47■□□□□ 0.39
SEC13-203ENST00000383801 GCP02774 474 aa17.47■□□□□ 0.39
SEC13-203ENST00000383801 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
SEC13-203ENST00000383801 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
SEC13-203ENST00000383801 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
SEC13-203ENST00000383801 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
SEC13-203ENST00000383801 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
SEC13-203ENST00000383801 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
SEC13-203ENST00000383801 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
SEC13-203ENST00000383801 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
SEC13-203ENST00000383801 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
SEC13-203ENST00000383801 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
SEC13-203ENST00000383801 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
SEC13-203ENST00000383801 BABAM1Q9NWV8 329 aa17.44■□□□□ 0.38
SEC13-203ENST00000383801 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
SEC13-203ENST00000383801 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
SEC13-203ENST00000383801 CHL1O00533 1208 aa17.42■□□□□ 0.38
SEC13-203ENST00000383801 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
SEC13-203ENST00000383801 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
SEC13-203ENST00000383801 ABCC6O95255 1503 aa17.42■□□□□ 0.38
SEC13-203ENST00000383801 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
SEC13-203ENST00000383801 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
SEC13-203ENST00000383801 VAMP4O75379 141 aa17.41■□□□□ 0.38
SEC13-203ENST00000383801 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
SEC13-203ENST00000383801 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
SEC13-203ENST00000383801 NCAPD2Q15021 1401 aa17.4■□□□□ 0.38
SEC13-203ENST00000383801 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
SEC13-203ENST00000383801 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
SEC13-203ENST00000383801 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
SEC13-203ENST00000383801 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
SEC13-203ENST00000383801 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
SEC13-203ENST00000383801 ATF7IPQ6VMQ6 1270 aa17.38■□□□□ 0.37
SEC13-203ENST00000383801 DZIP1LQ8IYY4 767 aaKnown RBP17.38■□□□□ 0.37
SEC13-203ENST00000383801 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
SEC13-203ENST00000383801 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
SEC13-203ENST00000383801 GNAT3A8MTJ3 354 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 PXDNQ92626 1479 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 CRB1P82279 1406 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
SEC13-203ENST00000383801 TWISTNBQ3B726 338 aaPredicted RBP17.37■□□□□ 0.37
SEC13-203ENST00000383801 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
SEC13-203ENST00000383801 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
SEC13-203ENST00000383801 FAM83GA6ND36 823 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms