RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 CALD1Q05682 793 aaKnown RBP25.01■■□□□ 1.59
GCOM1-201ENST00000380568 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
GCOM1-201ENST00000380568 GOLGA6L2Q8N9W4 650 aaPredicted RBP25■■□□□ 1.59
GCOM1-201ENST00000380568 PPP4R2Q9NY27 417 aa25■■□□□ 1.59
GCOM1-201ENST00000380568 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
GCOM1-201ENST00000380568 SLIT3O75094 1523 aa24.99■■□□□ 1.59
GCOM1-201ENST00000380568 CT47B1P0C2W7 299 aaPredicted RBP24.98■■□□□ 1.59
GCOM1-201ENST00000380568 AMPHP49418 695 aa24.98■■□□□ 1.59
GCOM1-201ENST00000380568 NFAT5O94916 1531 aa24.98■■□□□ 1.59
GCOM1-201ENST00000380568 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
GCOM1-201ENST00000380568 ORAI2Q96SN7 254 aa24.97■■□□□ 1.59
GCOM1-201ENST00000380568 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
GCOM1-201ENST00000380568 RRP7AQ9Y3A4 280 aaKnown RBP24.96■■□□□ 1.59
GCOM1-201ENST00000380568 RIPK4P57078 832 aa24.95■■□□□ 1.58
GCOM1-201ENST00000380568 NPHP3Q7Z494 1330 aa24.95■■□□□ 1.58
GCOM1-201ENST00000380568 XIRP1Q702N8 1843 aaKnown RBP24.95■■□□□ 1.58
GCOM1-201ENST00000380568 USP19O94966 1318 aa24.94■■□□□ 1.58
GCOM1-201ENST00000380568 KDRP35968 1356 aa24.93■■□□□ 1.58
GCOM1-201ENST00000380568 FOXO3O43524 673 aa24.93■■□□□ 1.58
GCOM1-201ENST00000380568 KRT28Q7Z3Y7 464 aa24.93■■□□□ 1.58
GCOM1-201ENST00000380568 HSP90AB2PQ58FF8 381 aa24.92■■□□□ 1.58
GCOM1-201ENST00000380568 TRIM35Q9UPQ4 493 aa24.92■■□□□ 1.58
GCOM1-201ENST00000380568 ALS2Q96Q42 1657 aa24.92■■□□□ 1.58
GCOM1-201ENST00000380568 HMOX1P09601 288 aa24.91■■□□□ 1.58
GCOM1-201ENST00000380568 SPINK5Q9NQ38 1064 aaPredicted RBP24.91■■□□□ 1.58
GCOM1-201ENST00000380568 IGSF1Q8N6C5 1336 aa24.91■■□□□ 1.58
GCOM1-201ENST00000380568 HOXC9P31274 260 aa24.91■■□□□ 1.58
GCOM1-201ENST00000380568 LTN1O94822 1766 aa24.9■■□□□ 1.58
GCOM1-201ENST00000380568 IRX6P78412 446 aaPredicted RBP24.89■■□□□ 1.57
GCOM1-201ENST00000380568 IP6K1Q92551 441 aa24.88■■□□□ 1.57
GCOM1-201ENST00000380568 SOX12O15370 315 aa24.87■■□□□ 1.57
GCOM1-201ENST00000380568 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
GCOM1-201ENST00000380568 ABCC6O95255 1503 aa24.86■■□□□ 1.57
GCOM1-201ENST00000380568 NUTM2GQ5VZR2 741 aa24.86■■□□□ 1.57
GCOM1-201ENST00000380568 ZNF335Q9H4Z2 1342 aaPredicted RBP24.85■■□□□ 1.57
GCOM1-201ENST00000380568 TNS3Q68CZ2 1445 aa24.85■■□□□ 1.57
GCOM1-201ENST00000380568 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
GCOM1-201ENST00000380568 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
GCOM1-201ENST00000380568 PXDNQ92626 1479 aa24.83■■□□□ 1.57
GCOM1-201ENST00000380568 GCP02774 474 aa24.83■■□□□ 1.57
GCOM1-201ENST00000380568 ZNF428Q96B54 188 aa24.83■■□□□ 1.57
GCOM1-201ENST00000380568 FANCIQ9NVI1 1328 aa24.83■■□□□ 1.57
GCOM1-201ENST00000380568 GNAI1P63096 354 aa24.81■■□□□ 1.56
GCOM1-201ENST00000380568 IFT57Q9NWB7 429 aa24.81■■□□□ 1.56
GCOM1-201ENST00000380568 ARHGEF25Q86VW2 580 aa24.81■■□□□ 1.56
GCOM1-201ENST00000380568 GAS2L2Q8NHY3 880 aa24.81■■□□□ 1.56
GCOM1-201ENST00000380568 EYA1Q99502 592 aa24.8■■□□□ 1.56
GCOM1-201ENST00000380568 DLG5Q8TDM6 1919 aa24.8■■□□□ 1.56
GCOM1-201ENST00000380568 HTATSF1O43719 755 aaKnown RBP24.78■■□□□ 1.56
GCOM1-201ENST00000380568 AEBP1Q8IUX7 1158 aa24.78■■□□□ 1.56
GCOM1-201ENST00000380568 PDE3AQ14432 1141 aa24.76■■□□□ 1.55
GCOM1-201ENST00000380568 BRINP3Q76B58 766 aa24.76■■□□□ 1.55
GCOM1-201ENST00000380568 SLAIN2Q9P270 581 aa24.76■■□□□ 1.55
GCOM1-201ENST00000380568 SPATA31A3Q5VYP0 1347 aa24.76■■□□□ 1.55
GCOM1-201ENST00000380568 PLEKHG2Q9H7P9 1386 aa24.76■■□□□ 1.55
GCOM1-201ENST00000380568 RARSP54136 660 aaKnown RBP24.76■■□□□ 1.55
GCOM1-201ENST00000380568 XPCQ01831 940 aaPredicted RBP24.76■■□□□ 1.55
GCOM1-201ENST00000380568 NCAPD2Q15021 1401 aa24.75■■□□□ 1.55
GCOM1-201ENST00000380568 HAP1P54257 671 aaPredicted RBP24.75■■□□□ 1.55
GCOM1-201ENST00000380568 LMOD2Q6P5Q4 547 aa24.75■■□□□ 1.55
GCOM1-201ENST00000380568 CFAP44Q96MT7 982 aa24.75■■□□□ 1.55
GCOM1-201ENST00000380568 ZNF853P0CG23 659 aa24.74■■□□□ 1.55
GCOM1-201ENST00000380568 CAMTA1Q9Y6Y1 1673 aa24.74■■□□□ 1.55
GCOM1-201ENST00000380568 MS4A1P11836 297 aa24.73■■□□□ 1.55
GCOM1-201ENST00000380568 SOS2Q07890 1332 aaPredicted RBP24.72■■□□□ 1.55
GCOM1-201ENST00000380568 AAMPQ13685 434 aa24.72■■□□□ 1.55
GCOM1-201ENST00000380568 CCDC136Q96JN2 1154 aa24.72■■□□□ 1.55
GCOM1-201ENST00000380568 CRYBG1Q9Y4K1 1723 aa24.72■■□□□ 1.55
GCOM1-201ENST00000380568 CPDO75976 1380 aa24.71■■□□□ 1.55
GCOM1-201ENST00000380568 ALDH1L2Q3SY69 923 aa24.71■■□□□ 1.55
GCOM1-201ENST00000380568 FAM208AQ9UK61 1670 aaKnown RBP24.7■■□□□ 1.54
GCOM1-201ENST00000380568 NHSL1Q5SYE7 1610 aa24.7■■□□□ 1.54
GCOM1-201ENST00000380568 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.54
GCOM1-201ENST00000380568 RTF1Q92541 710 aaKnown RBP24.7■■□□□ 1.54
GCOM1-201ENST00000380568 PLIN1O60240 522 aa24.69■■□□□ 1.54
GCOM1-201ENST00000380568 EXOC6Q8TAG9 804 aa24.69■■□□□ 1.54
GCOM1-201ENST00000380568 TSR2Q969E8 191 aaKnown RBP24.69■■□□□ 1.54
GCOM1-201ENST00000380568 BCAR3O75815 825 aa24.68■■□□□ 1.54
GCOM1-201ENST00000380568 CANXP27824 592 aaKnown RBP24.68■■□□□ 1.54
GCOM1-201ENST00000380568 BRPF1P55201 1214 aaPredicted RBP24.67■■□□□ 1.54
GCOM1-201ENST00000380568 KIF16BQ96L93 1317 aa24.67■■□□□ 1.54
GCOM1-201ENST00000380568 LRRC37A3O60309 1634 aa24.66■■□□□ 1.54
GCOM1-201ENST00000380568 MTHFSDQ2M296 383 aaKnown RBP24.66■■□□□ 1.54
GCOM1-201ENST00000380568 CRBNQ96SW2 442 aa24.65■■□□□ 1.54
GCOM1-201ENST00000380568 BABAM1Q9NWV8 329 aa24.65■■□□□ 1.54
GCOM1-201ENST00000380568 LMO7Q8WWI1 1683 aa24.64■■□□□ 1.54
GCOM1-201ENST00000380568 AMOTQ4VCS5 1084 aa24.64■■□□□ 1.53
GCOM1-201ENST00000380568 B4GALNT3Q6L9W6 998 aa24.64■■□□□ 1.53
GCOM1-201ENST00000380568 LTV1Q96GA3 475 aaPredicted RBP24.64■■□□□ 1.53
GCOM1-201ENST00000380568 KIAA0232Q92628 1395 aa24.64■■□□□ 1.53
GCOM1-201ENST00000380568 MAP3K5Q99683 1374 aa24.64■■□□□ 1.53
GCOM1-201ENST00000380568 GNAT3A8MTJ3 354 aa24.63■■□□□ 1.53
GCOM1-201ENST00000380568 ANKRD24Q8TF21 1146 aa24.63■■□□□ 1.53
GCOM1-201ENST00000380568 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
GCOM1-201ENST00000380568 ERBB3P21860 1342 aa24.63■■□□□ 1.53
GCOM1-201ENST00000380568 CRB1P82279 1406 aa24.62■■□□□ 1.53
GCOM1-201ENST00000380568 COL18A1P39060 1754 aa24.62■■□□□ 1.53
GCOM1-201ENST00000380568 CHL1O00533 1208 aa24.61■■□□□ 1.53
GCOM1-201ENST00000380568 IPO8O15397 1037 aaKnown RBP24.61■■□□□ 1.53
GCOM1-201ENST00000380568 NBPF6Q5VWK0 638 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms