RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ALKQ9UM73 1620 aa20.8■□□□□ 0.92
PCDHA1-201ENST00000378133 SPATA31D1Q6ZQQ2 1576 aa20.79■□□□□ 0.92
PCDHA1-201ENST00000378133 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
PCDHA1-201ENST00000378133 PHACTR3Q96KR7 559 aa20.79■□□□□ 0.92
PCDHA1-201ENST00000378133 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
PCDHA1-201ENST00000378133 RRP9O43818 475 aaKnown RBP20.78■□□□□ 0.92
PCDHA1-201ENST00000378133 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
PCDHA1-201ENST00000378133 ESPNB1AK53 854 aa20.77■□□□□ 0.92
PCDHA1-201ENST00000378133 NUCB1Q02818 461 aa20.76■□□□□ 0.91
PCDHA1-201ENST00000378133 ISY1Q9ULR0 285 aaKnown RBP20.76■□□□□ 0.91
PCDHA1-201ENST00000378133 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
PCDHA1-201ENST00000378133 ZNF692Q9BU19 519 aaPredicted RBP20.75■□□□□ 0.91
PCDHA1-201ENST00000378133 ESF1Q9H501 851 aaKnown RBP20.75■□□□□ 0.91
PCDHA1-201ENST00000378133 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 EMILIN1Q9Y6C2 1016 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 KIF20BQ96Q89 1820 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 VAMP4O75379 141 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
PCDHA1-201ENST00000378133 CHD1LQ86WJ1 897 aa20.73■□□□□ 0.91
PCDHA1-201ENST00000378133 TRIM44Q96DX7 344 aaPredicted RBP20.73■□□□□ 0.91
PCDHA1-201ENST00000378133 ZBTB7BO15156 539 aaPredicted RBP20.72■□□□□ 0.91
PCDHA1-201ENST00000378133 C1orf115Q9H7X2 142 aa20.72■□□□□ 0.91
PCDHA1-201ENST00000378133 ERBB4Q15303 1308 aa20.72■□□□□ 0.91
PCDHA1-201ENST00000378133 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
PCDHA1-201ENST00000378133 BRPF1P55201 1214 aaPredicted RBP20.71■□□□□ 0.91
PCDHA1-201ENST00000378133 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
PCDHA1-201ENST00000378133 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
PCDHA1-201ENST00000378133 MRPL50Q8N5N7 158 aaKnown RBP20.71■□□□□ 0.91
PCDHA1-201ENST00000378133 ANKRD45Q5TZF3 282 aa20.7■□□□□ 0.9
PCDHA1-201ENST00000378133 NME9Q86XW9 330 aa20.7■□□□□ 0.9
PCDHA1-201ENST00000378133 CDC42BPGQ6DT37 1551 aa20.69■□□□□ 0.9
PCDHA1-201ENST00000378133 IL13P35225 146 aa20.69■□□□□ 0.9
PCDHA1-201ENST00000378133 DDIT3P35638 169 aa20.69■□□□□ 0.9
PCDHA1-201ENST00000378133 TNPO1Q92973 898 aaKnown RBP20.69■□□□□ 0.9
PCDHA1-201ENST00000378133 MBIPQ9NS73 344 aa20.68■□□□□ 0.9
PCDHA1-201ENST00000378133 GNAI1P63096 354 aa20.68■□□□□ 0.9
PCDHA1-201ENST00000378133 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
PCDHA1-201ENST00000378133 PPIP5K1Q6PFW1 1433 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 GAS2L3Q86XJ1 694 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 ATP7BP35670 1465 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 ARHGAP45Q92619 1136 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 GBP4Q96PP9 640 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
PCDHA1-201ENST00000378133 NCOA3Q9Y6Q9 1424 aa20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 SNX21Q969T3 373 aa20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 FER1L4A9Z1Z3 1794 aa20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 NCKAP5LQ9HCH0 1330 aa20.66■□□□□ 0.9
PCDHA1-201ENST00000378133 WASLO00401 505 aaPredicted RBP20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 GCC1Q96CN9 775 aa20.65■□□□□ 0.9
PCDHA1-201ENST00000378133 SKOR2Q2VWA4 1001 aaPredicted RBP20.64■□□□□ 0.9
PCDHA1-201ENST00000378133 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.9
PCDHA1-201ENST00000378133 CIZ1Q9ULV3 898 aaPredicted RBP20.64■□□□□ 0.9
PCDHA1-201ENST00000378133 RIMS2Q9UQ26 1411 aa20.64■□□□□ 0.9
PCDHA1-201ENST00000378133 FAM83GA6ND36 823 aa20.64■□□□□ 0.89
PCDHA1-201ENST00000378133 TXNDC2Q86VQ3 553 aa20.64■□□□□ 0.89
PCDHA1-201ENST00000378133 SIRT2Q8IXJ6 389 aa20.64■□□□□ 0.89
PCDHA1-201ENST00000378133 C8orf58Q8NAV2 365 aa20.64■□□□□ 0.89
PCDHA1-201ENST00000378133 TNRQ92752 1358 aa20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 CHMP4BQ9H444 224 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 C3P01024 1663 aa20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
PCDHA1-201ENST00000378133 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 EDC4Q6P2E9 1401 aaKnown RBP20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 RAB3GAP1Q15042 981 aa20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 NUDT16Q96DE0 195 aaKnown RBP20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 COG3Q96JB2 828 aa20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
PCDHA1-201ENST00000378133 PTCH1Q13635 1447 aa20.61■□□□□ 0.89
PCDHA1-201ENST00000378133 PIK3R4Q99570 1358 aa20.61■□□□□ 0.89
PCDHA1-201ENST00000378133 ABCC4O15439 1325 aa20.6■□□□□ 0.89
PCDHA1-201ENST00000378133 PTMSP20962 102 aa20.6■□□□□ 0.89
PCDHA1-201ENST00000378133 TPM2P07951 284 aa20.6■□□□□ 0.89
PCDHA1-201ENST00000378133 METP08581 1390 aa20.59■□□□□ 0.89
PCDHA1-201ENST00000378133 LMOD3Q0VAK6 560 aa20.58■□□□□ 0.89
PCDHA1-201ENST00000378133 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.89
PCDHA1-201ENST00000378133 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.88
PCDHA1-201ENST00000378133 KIF2CQ99661 725 aa20.58■□□□□ 0.88
PCDHA1-201ENST00000378133 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
PCDHA1-201ENST00000378133 AATKQ6ZMQ8 1374 aa20.57■□□□□ 0.88
PCDHA1-201ENST00000378133 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
PCDHA1-201ENST00000378133 RBM10P98175 930 aaKnown RBP20.57■□□□□ 0.88
PCDHA1-201ENST00000378133 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
PCDHA1-201ENST00000378133 API5Q9BZZ5 524 aaKnown RBP20.56■□□□□ 0.88
PCDHA1-201ENST00000378133 UBR1Q8IWV7 1749 aa20.56■□□□□ 0.88
PCDHA1-201ENST00000378133 SETD1AO15047 1707 aaKnown RBP20.56■□□□□ 0.88
PCDHA1-201ENST00000378133 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
PCDHA1-201ENST00000378133 CPS1P31327 1500 aa20.55■□□□□ 0.88
PCDHA1-201ENST00000378133 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
PCDHA1-201ENST00000378133 CD2BP2O95400 341 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms