RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 KIF16BQ96L93 1317 aa21.53■■□□□ 1.04
VEGFA-205ENST00000372067 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
VEGFA-205ENST00000372067 PRR36Q9H6K5 1346 aa21.53■■□□□ 1.04
VEGFA-205ENST00000372067 HSP90AA2PQ14568 343 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-205ENST00000372067 AGLP35573 1532 aa21.53■■□□□ 1.04
VEGFA-205ENST00000372067 NLRP6P59044 892 aa21.52■■□□□ 1.04
VEGFA-205ENST00000372067 TTC21BQ7Z4L5 1316 aa21.52■■□□□ 1.04
VEGFA-205ENST00000372067 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
VEGFA-205ENST00000372067 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
VEGFA-205ENST00000372067 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-205ENST00000372067 HSP90AB2PQ58FF8 381 aa21.52■■□□□ 1.04
VEGFA-205ENST00000372067 TWISTNBQ3B726 338 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-205ENST00000372067 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
VEGFA-205ENST00000372067 IL13P35225 146 aa21.51■■□□□ 1.03
VEGFA-205ENST00000372067 EDC4Q6P2E9 1401 aaKnown RBP21.51■■□□□ 1.03
VEGFA-205ENST00000372067 NFKBIBQ15653 356 aa21.5■■□□□ 1.03
VEGFA-205ENST00000372067 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
VEGFA-205ENST00000372067 MCM10Q7L590 875 aa21.5■■□□□ 1.03
VEGFA-205ENST00000372067 CD163L1Q9NR16 1453 aa21.49■■□□□ 1.03
VEGFA-205ENST00000372067 APBB1O00213 710 aa21.48■■□□□ 1.03
VEGFA-205ENST00000372067 PDE4CQ08493 712 aa21.48■■□□□ 1.03
VEGFA-205ENST00000372067 MBIPQ9NS73 344 aa21.48■■□□□ 1.03
VEGFA-205ENST00000372067 IL16Q14005 1332 aa21.47■■□□□ 1.03
VEGFA-205ENST00000372067 LNPKQ9C0E8 428 aa21.47■■□□□ 1.03
VEGFA-205ENST00000372067 MFAP1P55081 439 aaKnown RBP21.47■■□□□ 1.03
VEGFA-205ENST00000372067 EIF4A2Q14240 407 aaKnown RBP21.47■■□□□ 1.03
VEGFA-205ENST00000372067 MIS18AQ9NYP9 233 aa21.47■■□□□ 1.03
VEGFA-205ENST00000372067 SPRYD3Q8NCJ5 442 aa21.46■■□□□ 1.03
VEGFA-205ENST00000372067 IQSEC2Q5JU85 1478 aa21.46■■□□□ 1.03
VEGFA-205ENST00000372067 RRP9O43818 475 aaKnown RBP21.45■■□□□ 1.02
VEGFA-205ENST00000372067 SPATA31D1Q6ZQQ2 1576 aa21.45■■□□□ 1.02
VEGFA-205ENST00000372067 ATP7BP35670 1465 aa21.45■■□□□ 1.02
VEGFA-205ENST00000372067 ANKRD45Q5TZF3 282 aa21.44■■□□□ 1.02
VEGFA-205ENST00000372067 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
VEGFA-205ENST00000372067 SHPRHQ149N8 1683 aa21.44■■□□□ 1.02
VEGFA-205ENST00000372067 BECN1Q14457 450 aa21.43■■□□□ 1.02
VEGFA-205ENST00000372067 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
VEGFA-205ENST00000372067 SLKQ9H2G2 1235 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-205ENST00000372067 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
VEGFA-205ENST00000372067 KRT24Q2M2I5 525 aa21.42■■□□□ 1.02
VEGFA-205ENST00000372067 SLC4A10Q6U841 1118 aa21.42■■□□□ 1.02
VEGFA-205ENST00000372067 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
VEGFA-205ENST00000372067 KCNA6P17658 529 aa21.42■■□□□ 1.02
VEGFA-205ENST00000372067 SEC24BO95487 1268 aa21.41■■□□□ 1.02
VEGFA-205ENST00000372067 VAMP4O75379 141 aa21.4■■□□□ 1.02
VEGFA-205ENST00000372067 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
VEGFA-205ENST00000372067 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
VEGFA-205ENST00000372067 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
VEGFA-205ENST00000372067 SIRT1Q96EB6 747 aa21.39■■□□□ 1.02
VEGFA-205ENST00000372067 USP32Q8NFA0 1604 aa21.39■■□□□ 1.02
VEGFA-205ENST00000372067 CFAP44Q96MT7 982 aa21.39■■□□□ 1.01
VEGFA-205ENST00000372067 PNPLA6Q8IY17 1366 aa21.38■■□□□ 1.01
VEGFA-205ENST00000372067 TSPYL4Q9UJ04 414 aa21.38■■□□□ 1.01
VEGFA-205ENST00000372067 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
VEGFA-205ENST00000372067 FOXO3O43524 673 aa21.37■■□□□ 1.01
VEGFA-205ENST00000372067 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
VEGFA-205ENST00000372067 API5Q9BZZ5 524 aaKnown RBP21.37■■□□□ 1.01
VEGFA-205ENST00000372067 PRDM4Q9UKN5 801 aa21.37■■□□□ 1.01
VEGFA-205ENST00000372067 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-205ENST00000372067 FAM135BQ49AJ0 1406 aa21.37■■□□□ 1.01
VEGFA-205ENST00000372067 PSME1Q06323 249 aa21.37■■□□□ 1.01
VEGFA-205ENST00000372067 ESCO1Q5FWF5 840 aa21.37■■□□□ 1.01
VEGFA-205ENST00000372067 NLRP1Q9C000 1473 aa21.36■■□□□ 1.01
VEGFA-205ENST00000372067 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-205ENST00000372067 MAP3K19Q56UN5 1328 aa21.36■■□□□ 1.01
VEGFA-205ENST00000372067 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
VEGFA-205ENST00000372067 MED14O60244 1454 aa21.36■■□□□ 1.01
VEGFA-205ENST00000372067 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
VEGFA-205ENST00000372067 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
VEGFA-205ENST00000372067 CPS1P31327 1500 aa21.35■■□□□ 1.01
VEGFA-205ENST00000372067 ANKLE2Q86XL3 938 aa21.35■■□□□ 1.01
VEGFA-205ENST00000372067 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
VEGFA-205ENST00000372067 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
VEGFA-205ENST00000372067 USHBP1Q8N6Y0 703 aa21.34■■□□□ 1.01
VEGFA-205ENST00000372067 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-205ENST00000372067 LRRC7Q96NW7 1537 aa21.34■■□□□ 1.01
VEGFA-205ENST00000372067 HAP1P54257 671 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-205ENST00000372067 NAP1L5Q96NT1 182 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-205ENST00000372067 REREQ9P2R6 1566 aa21.33■■□□□ 1
VEGFA-205ENST00000372067 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
VEGFA-205ENST00000372067 HSP90AA1P07900 732 aaKnown RBP21.32■■□□□ 1
VEGFA-205ENST00000372067 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
VEGFA-205ENST00000372067 ZNF428Q96B54 188 aa21.32■■□□□ 1
VEGFA-205ENST00000372067 SLC4A2P04920 1241 aa21.32■■□□□ 1
VEGFA-205ENST00000372067 STK31Q9BXU1 1019 aa21.31■■□□□ 1
VEGFA-205ENST00000372067 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
VEGFA-205ENST00000372067 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
VEGFA-205ENST00000372067 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
VEGFA-205ENST00000372067 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
VEGFA-205ENST00000372067 EYA1Q99502 592 aa21.28■■□□□ 1
VEGFA-205ENST00000372067 PHF8Q9UPP1 1060 aa21.28■■□□□ 1
VEGFA-205ENST00000372067 FRAT2O75474 233 aaPredicted RBP21.28■■□□□ 1
VEGFA-205ENST00000372067 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
VEGFA-205ENST00000372067 USP6P35125 1406 aa21.27■■□□□ 1
VEGFA-205ENST00000372067 TTC21AQ8NDW8 1320 aa21.27■□□□□ 0.99
VEGFA-205ENST00000372067 PDIA4P13667 645 aaKnown RBP21.26■□□□□ 0.99
VEGFA-205ENST00000372067 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
VEGFA-205ENST00000372067 CDK12Q9NYV4 1490 aaPredicted RBP21.26■□□□□ 0.99
VEGFA-205ENST00000372067 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
VEGFA-205ENST00000372067 KIF13AQ9H1H9 1805 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms