RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 PLEKHG3A1L390 1219 aa6.91□□□□□ -1.3
PCDH11X-202ENST00000361655 ANKRD45Q5TZF3 282 aa6.91□□□□□ -1.3
PCDH11X-202ENST00000361655 CHMP4AQ9BY43 222 aa6.91□□□□□ -1.3
PCDH11X-202ENST00000361655 SPINK5Q9NQ38 1064 aaPredicted RBP6.91□□□□□ -1.3
PCDH11X-202ENST00000361655 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
PCDH11X-202ENST00000361655 RIC3Q7Z5B4 369 aa6.9□□□□□ -1.3
PCDH11X-202ENST00000361655 SSH1Q8WYL5 1049 aa6.9□□□□□ -1.3
PCDH11X-202ENST00000361655 API5Q9BZZ5 524 aaKnown RBP6.9□□□□□ -1.3
PCDH11X-202ENST00000361655 HOXC9P31274 260 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 KRT24Q2M2I5 525 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 C8orf37Q96NL8 207 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 FRMPD1Q5SYB0 1578 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 FANCIQ9NVI1 1328 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 CAMSAP1Q5T5Y3 1602 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 ANXA1P04083 346 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 MTHFSDQ2M296 383 aaKnown RBP6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 TAF7LQ5H9L4 462 aa6.9□□□□□ -1.31
PCDH11X-202ENST00000361655 KIF16BQ96L93 1317 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 NEXNQ0ZGT2 675 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 TAOK2Q9UL54 1235 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 DDX19BQ9UMR2 479 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 MAP3K4Q9Y6R4 1608 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 CCDC30Q5VVM6 783 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 SKAP1Q86WV1 359 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 SIRT1Q96EB6 747 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 SLC39A6Q13433 755 aa6.89□□□□□ -1.31
PCDH11X-202ENST00000361655 MBIPQ9NS73 344 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 POLR3AO14802 1390 aaPredicted RBP6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 SBNO2Q9Y2G9 1366 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 EDC4Q6P2E9 1401 aaKnown RBP6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 F6X3S4 739 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 HMMRO75330 724 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 TAF7Q15545 349 aaPredicted RBP6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 LNPKQ9C0E8 428 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 LMTK2Q8IWU2 1503 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 TRIM6-TRIM34B2RNG4 842 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 RARSP54136 660 aaKnown RBP6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 NBR1Q14596 966 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 BTG4Q9NY30 223 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 BCORL1Q5H9F3 1711 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 ARHGEF40Q8TER5 1519 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 FLT4P35916 1363 aa6.88□□□□□ -1.31
PCDH11X-202ENST00000361655 DDX58O95786 925 aaKnown RBP6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 IL13P35225 146 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 PIP4K2AP48426 406 aaPredicted RBP6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 ATF7IPQ6VMQ6 1270 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 SPRYD3Q8NCJ5 442 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 SETD1BQ9UPS6 1966 aaKnown RBP6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 ALKQ9UM73 1620 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 ADGRB3O60242 1522 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 NBPF6Q5VWK0 638 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 IP6K1Q92551 441 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 NBPF4Q96M43 638 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 RSPH6AQ9H0K4 717 aa6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
PCDH11X-202ENST00000361655 EXOC5O00471 708 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 KCNJ4P48050 445 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 AMOTQ4VCS5 1084 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 CASC1Q6TDU7 716 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 TSPYL6Q8N831 410 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 ACSBG1Q96GR2 724 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 TNNQ9UQP3 1299 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 AGLP35573 1532 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 TRPM1Q7Z4N2 1603 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 CENPQQ7L2Z9 268 aaPredicted RBP6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 CFAP44Q96MT7 982 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 ZFYVE9O95405 1425 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 MADDQ8WXG6 1647 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 MFAP1P55081 439 aaKnown RBP6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 IFT57Q9NWB7 429 aa6.86□□□□□ -1.31
PCDH11X-202ENST00000361655 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 PIK3C2BO00750 1634 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 KDM4FA0A1W2PPD8 638 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 IFNL2Q8IZJ0 200 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 NFATC2IPQ8NCF5 419 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 CCDC85AQ96PX6 553 aaPredicted RBP6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 TMOD3Q9NYL9 352 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 TPRNQ4KMQ1 711 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 TSHZ2Q9NRE2 1034 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 RICTORQ6R327 1708 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 SYNMO15061 1565 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 LGR6Q9HBX8 967 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 PTPRMP28827 1452 aa6.85□□□□□ -1.31
PCDH11X-202ENST00000361655 NPC1L1Q9UHC9 1359 aa6.84□□□□□ -1.31
PCDH11X-202ENST00000361655 HSP90AB1P08238 724 aaKnown RBP6.84□□□□□ -1.31
PCDH11X-202ENST00000361655 PDE3AQ14432 1141 aa6.84□□□□□ -1.31
PCDH11X-202ENST00000361655 JARID2Q92833 1246 aaPredicted RBP6.84□□□□□ -1.31
PCDH11X-202ENST00000361655 NEXMIFQ5QGS0 1516 aa6.84□□□□□ -1.32
PCDH11X-202ENST00000361655 ZMYM4Q5VZL5 1548 aa6.84□□□□□ -1.32
PCDH11X-202ENST00000361655 RIMS1Q86UR5 1692 aaKnown RBP6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 TRIM27P14373 513 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 MVPQ14764 893 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms