RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 USP19O94966 1318 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 SLAIN2Q9P270 581 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 YTHDC2Q9H6S0 1430 aaKnown RBP7.88□□□□□ -1.15
CD47-201ENST00000355354 CCDC7Q96M83 1385 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 RLBP1P12271 317 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 POLR3AO14802 1390 aaPredicted RBP7.87□□□□□ -1.15
CD47-201ENST00000355354 TSPY4P0CV99 314 aa7.87□□□□□ -1.15
CD47-201ENST00000355354 TSPY10P0CW01 314 aa7.87□□□□□ -1.15
CD47-201ENST00000355354 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
CD47-201ENST00000355354 BCAR3O75815 825 aa7.87□□□□□ -1.15
CD47-201ENST00000355354 MSH6P52701 1360 aa7.87□□□□□ -1.15
CD47-201ENST00000355354 CC2D1BQ5T0F9 858 aaKnown RBP7.86□□□□□ -1.15
CD47-201ENST00000355354 ATAD2Q6PL18 1390 aa7.86□□□□□ -1.15
CD47-201ENST00000355354 UPF1Q92900 1129 aaKnown RBP eCLIP7.86□□□□□ -1.15
CD47-201ENST00000355354 SBNO1A3KN83 1393 aa7.86□□□□□ -1.15
CD47-201ENST00000355354 CCDC146Q8IYE0 955 aa7.86□□□□□ -1.15
CD47-201ENST00000355354 DLEC1Q9Y238 1755 aa7.86□□□□□ -1.15
CD47-201ENST00000355354 CHD4Q14839 1912 aa7.85□□□□□ -1.15
CD47-201ENST00000355354 RPGRIP1LQ68CZ1 1315 aa7.85□□□□□ -1.15
CD47-201ENST00000355354 UBR3Q6ZT12 1888 aa7.84□□□□□ -1.15
CD47-201ENST00000355354 TNS3Q68CZ2 1445 aa7.84□□□□□ -1.15
CD47-201ENST00000355354 NCAPD2Q15021 1401 aa7.84□□□□□ -1.15
CD47-201ENST00000355354 ZFHX3Q15911 3703 aa7.84□□□□□ -1.15
CD47-201ENST00000355354 IGHDP01880 384 aa7.84□□□□□ -1.15
CD47-201ENST00000355354 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
CD47-201ENST00000355354 ADAMTS8Q9UP79 889 aa7.83□□□□□ -1.16
CD47-201ENST00000355354 C19orf44Q9H6X5 657 aa7.83□□□□□ -1.16
CD47-201ENST00000355354 C5P01031 1676 aa7.83□□□□□ -1.16
CD47-201ENST00000355354 DOT1LQ8TEK3 1739 aa7.83□□□□□ -1.16
CD47-201ENST00000355354 SLC4A1APQ9BWU0 796 aaKnown RBP7.83□□□□□ -1.16
CD47-201ENST00000355354 MAP1BP46821 2468 aaKnown RBP7.83□□□□□ -1.16
CD47-201ENST00000355354 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
CD47-201ENST00000355354 CEP290O15078 2479 aa7.83□□□□□ -1.16
CD47-201ENST00000355354 TNNT2P45379 298 aaPredicted RBP7.83□□□□□ -1.16
CD47-201ENST00000355354 RRP7AQ9Y3A4 280 aaKnown RBP7.82□□□□□ -1.16
CD47-201ENST00000355354 TRANK1O15050 2925 aa7.82□□□□□ -1.16
CD47-201ENST00000355354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.16
CD47-201ENST00000355354 UBR2Q8IWV8 1755 aa7.82□□□□□ -1.16
CD47-201ENST00000355354 JARID2Q92833 1246 aaPredicted RBP7.81□□□□□ -1.16
CD47-201ENST00000355354 TCERG1O14776 1098 aaKnown RBP7.81□□□□□ -1.16
CD47-201ENST00000355354 C4AP0C0L4 1744 aa7.81□□□□□ -1.16
CD47-201ENST00000355354 C4BP0C0L5 1744 aa7.81□□□□□ -1.16
CD47-201ENST00000355354 NRXN2Q9P2S2 1712 aa7.81□□□□□ -1.16
CD47-201ENST00000355354 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
CD47-201ENST00000355354 SLC26A8Q96RN1 970 aa7.8□□□□□ -1.16
CD47-201ENST00000355354 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.8□□□□□ -1.16
CD47-201ENST00000355354 ADGRF5Q8IZF2 1346 aa7.8□□□□□ -1.16
CD47-201ENST00000355354 TONSLQ96HA7 1378 aa7.79□□□□□ -1.16
CD47-201ENST00000355354 DEKP35659 375 aaKnown RBP7.79□□□□□ -1.16
CD47-201ENST00000355354 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
CD47-201ENST00000355354 CD2BP2O95400 341 aaKnown RBP7.79□□□□□ -1.16
CD47-201ENST00000355354 GPRASP1Q5JY77 1395 aa7.79□□□□□ -1.16
CD47-201ENST00000355354 RNF123Q5XPI4 1314 aa7.78□□□□□ -1.16
CD47-201ENST00000355354 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
CD47-201ENST00000355354 AATKQ6ZMQ8 1374 aa7.78□□□□□ -1.16
CD47-201ENST00000355354 ARFGEF2Q9Y6D5 1785 aa7.78□□□□□ -1.16
CD47-201ENST00000355354 CPSF1Q10570 1443 aaKnown RBP7.78□□□□□ -1.16
CD47-201ENST00000355354 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.16
CD47-201ENST00000355354 TCHHQ07283 1943 aa7.77□□□□□ -1.17
CD47-201ENST00000355354 ZRANB1Q9UGI0 708 aa7.77□□□□□ -1.17
CD47-201ENST00000355354 CPDO75976 1380 aa7.77□□□□□ -1.17
CD47-201ENST00000355354 LAMB1P07942 1786 aa7.77□□□□□ -1.17
CD47-201ENST00000355354 SPATA31A3Q5VYP0 1347 aa7.77□□□□□ -1.17
CD47-201ENST00000355354 KRT24Q2M2I5 525 aa7.76□□□□□ -1.17
CD47-201ENST00000355354 THUMPD2Q9BTF0 503 aaKnown RBP7.76□□□□□ -1.17
CD47-201ENST00000355354 C14orf93Q9H972 538 aaKnown RBP7.76□□□□□ -1.17
CD47-201ENST00000355354 CSMD2Q7Z408 3487 aa7.76□□□□□ -1.17
CD47-201ENST00000355354 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
CD47-201ENST00000355354 ARXQ96QS3 562 aa7.76□□□□□ -1.17
CD47-201ENST00000355354 SAFB2Q14151 953 aaKnown RBP eCLIP7.76□□□□□ -1.17
CD47-201ENST00000355354 PANK2Q9BZ23 570 aa7.76□□□□□ -1.17
CD47-201ENST00000355354 CRBNQ96SW2 442 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 COL5A2P05997 1499 aaPredicted RBP7.75□□□□□ -1.17
CD47-201ENST00000355354 TJP1Q07157 1748 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 PCDHB15Q9Y5E8 787 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 NEUROD2Q15784 382 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 CADPS2Q86UW7 1296 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 USP47Q96K76 1375 aa7.75□□□□□ -1.17
CD47-201ENST00000355354 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
CD47-201ENST00000355354 FRAT2O75474 233 aaPredicted RBP7.74□□□□□ -1.17
CD47-201ENST00000355354 CFAP70Q5T0N1 1121 aa7.74□□□□□ -1.17
CD47-201ENST00000355354 ANP32CO43423 234 aa7.74□□□□□ -1.17
CD47-201ENST00000355354 DSPP15924 2871 aaKnown RBP7.74□□□□□ -1.17
CD47-201ENST00000355354 ASH1LQ9NR48 2969 aaKnown RBP7.74□□□□□ -1.17
CD47-201ENST00000355354 ZNF646O15015 1829 aaPredicted RBP7.74□□□□□ -1.17
CD47-201ENST00000355354 PRKCSHP14314 528 aaPredicted RBP7.73□□□□□ -1.17
CD47-201ENST00000355354 CLUAP1Q96AJ1 413 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 EID1Q9Y6B2 187 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 BLMP54132 1417 aaPredicted RBP7.73□□□□□ -1.17
CD47-201ENST00000355354 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 ESF1Q9H501 851 aaKnown RBP7.73□□□□□ -1.17
CD47-201ENST00000355354 PANK3Q9H999 370 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 SCN11AQ9UI33 1791 aa7.73□□□□□ -1.17
CD47-201ENST00000355354 POGKQ9P215 609 aa7.72□□□□□ -1.17
CD47-201ENST00000355354 ADGRG4Q8IZF6 3080 aa7.72□□□□□ -1.17
CD47-201ENST00000355354 SBNO2Q9Y2G9 1366 aa7.72□□□□□ -1.17
CD47-201ENST00000355354 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms