RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 KINO60870 393 aaKnown RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 BAG4O95429 457 aaKnown RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 ZKSCAN1P17029 563 aaPredicted RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 NEXNQ0ZGT2 675 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 PPP1R9BQ96SB3 815 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 SKIDA1Q1XH10 827 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 FSD2A1L4K1 749 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 RUFY2Q8WXA3 655 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 GCC1Q96CN9 775 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 MTMR7Q9Y216 660 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 MKRN1Q9UHC7 482 aaKnown RBP5.94□□□□□ -1.46
SKP1-202ENST00000353411 CAPN2P17655 700 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 OLFM4Q6UX06 510 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 MICALL1Q8N3F8 863 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 SMARCE1Q969G3 411 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 RSRC1Q96IZ7 334 aaKnown RBP5.94□□□□□ -1.46
SKP1-202ENST00000353411 KIF21BO75037 1637 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 SLU7O95391 586 aaKnown RBP5.94□□□□□ -1.46
SKP1-202ENST00000353411 AP1ARQ63HQ0 302 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 RPAINQ86UA6 219 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.94□□□□□ -1.469e-8■■■□□ 17.3
SKP1-202ENST00000353411 USP25Q9UHP3 1055 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 TICAM2Q86XR7 235 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 CHMP3Q9Y3E7 222 aa5.94□□□□□ -1.46
SKP1-202ENST00000353411 TEX14Q8IWB6 1497 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 VPS37CA5D8V6 355 aaPredicted RBP5.93□□□□□ -1.46
SKP1-202ENST00000353411 U2AF2P26368 475 aaKnown RBP eCLIP5.93□□□□□ -1.461e-9■■■■□ 21.1
SKP1-202ENST00000353411 SWAP70Q9UH65 585 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 POTEDQ86YR6 584 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 SNX21Q969T3 373 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 NUTM1Q86Y26 1132 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 SMARCC1Q92922 1105 aaPredicted RBP5.93□□□□□ -1.46
SKP1-202ENST00000353411 NUP62CLQ9H1M0 184 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 UNC13AQ9UPW8 1703 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 ZNF853P0CG23 659 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 SFPQP23246 707 aaKnown RBP eCLIP5.93□□□□□ -1.46
SKP1-202ENST00000353411 CCDC50Q8IVM0 306 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 LNPKQ9C0E8 428 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 EBAG9O00559 213 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 C8orf34Q49A92 452 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 U2AF1L5P0DN76 240 aaPredicted RBP5.93□□□□□ -1.46
SKP1-202ENST00000353411 U2AF1Q01081 240 aaKnown RBP eCLIP5.93□□□□□ -1.469e-7■■■■□ 24.3
SKP1-202ENST00000353411 MPNDQ8N594 471 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 CEP120Q8N960 986 aa5.93□□□□□ -1.46
SKP1-202ENST00000353411 KRT85P78386 507 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ANKRD18AQ8IVF6 992 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CLIP2Q9UDT6 1046 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CUL7Q14999 1698 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ERICH3Q5RHP9 1530 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 TUBBP07437 444 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CCDC196A0A1B0GTZ2 297 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CASQ1P31415 396 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CDCA7LQ96GN5 454 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 YY1AP1Q9H869 796 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ARID4AP29374 1257 aaPredicted RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 NEK4P51957 841 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ERO1AQ96HE7 468 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 SYNJ2O15056 1496 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 GON4LQ3T8J9 2241 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 FIBPO43427 364 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CCDC172P0C7W6 258 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ZNF445P59923 1031 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 SNW1Q13573 536 aaKnown RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 SDF4Q9BRK5 362 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 PTPRGP23470 1445 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 A6NNZ2 444 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 ENOX2Q16206 610 aaKnown RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 TUBB8Q3ZCM7 444 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 CEP57L1Q8IYX8 460 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 MIPOL1Q8TD10 442 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 RBM33Q96EV2 1170 aaKnown RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.92□□□□□ -1.46
SKP1-202ENST00000353411 KDM4AO75164 1064 aa5.92□□□□□ -1.46
SKP1-202ENST00000353411 HMGB2P26583 209 aaKnown RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 GTF2E1P29083 439 aaPredicted RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 RBBP5Q15291 538 aaKnown RBP5.92□□□□□ -1.46
SKP1-202ENST00000353411 ST20-MTHFSA0A0A6YYL1 179 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 CEP112Q8N8E3 955 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 SSFA2P28290 1259 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 NBPF11Q86T75 865 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 CERS3Q8IU89 383 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 PDILTQ8N807 584 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 GEMIN8Q9NWZ8 242 aaKnown RBP5.91□□□□□ -1.46
SKP1-202ENST00000353411 WDR62O43379 1518 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 HSPA4P34932 840 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 TRDNQ13061 729 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 SMC5Q8IY18 1101 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 ANO2Q9NQ90 1003 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 CCDC144AA2RUR9 1427 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 FGD5Q6ZNL6 1462 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 WDR66Q8TBY9 1149 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 RILPL2Q969X0 211 aa5.91□□□□□ -1.46
SKP1-202ENST00000353411 PANK3Q9H999 370 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms