RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
SMTN-202ENST00000347557 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.5
SMTN-202ENST00000347557 PDE4CQ08493 712 aa18.14■□□□□ 0.5
SMTN-202ENST00000347557 C16orf71Q8IYS4 520 aaPredicted RBP18.14■□□□□ 0.5
SMTN-202ENST00000347557 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
SMTN-202ENST00000347557 ADGRB2O60241 1585 aa18.14■□□□□ 0.49
SMTN-202ENST00000347557 RBM25P49756 843 aaKnown RBP18.14■□□□□ 0.49
SMTN-202ENST00000347557 GCC1Q96CN9 775 aa18.14■□□□□ 0.49
SMTN-202ENST00000347557 COL3A1P02461 1466 aaPredicted RBP18.13■□□□□ 0.49
SMTN-202ENST00000347557 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
SMTN-202ENST00000347557 GBP4Q96PP9 640 aa18.13■□□□□ 0.49
SMTN-202ENST00000347557 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
SMTN-202ENST00000347557 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
SMTN-202ENST00000347557 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
SMTN-202ENST00000347557 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
SMTN-202ENST00000347557 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
SMTN-202ENST00000347557 COG3Q96JB2 828 aa18.12■□□□□ 0.49
SMTN-202ENST00000347557 CD163L1Q9NR16 1453 aa18.11■□□□□ 0.49
SMTN-202ENST00000347557 FSD2A1L4K1 749 aa18.11■□□□□ 0.49
SMTN-202ENST00000347557 SSFA2P28290 1259 aa18.11■□□□□ 0.49
SMTN-202ENST00000347557 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
SMTN-202ENST00000347557 MRE11P49959 708 aa18.11■□□□□ 0.49
SMTN-202ENST00000347557 PTPRMP28827 1452 aa18.11■□□□□ 0.49
SMTN-202ENST00000347557 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
SMTN-202ENST00000347557 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
SMTN-202ENST00000347557 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
SMTN-202ENST00000347557 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
SMTN-202ENST00000347557 KIF2CQ99661 725 aa18.1■□□□□ 0.49
SMTN-202ENST00000347557 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
SMTN-202ENST00000347557 IL13P35225 146 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
SMTN-202ENST00000347557 CDC45O75419 566 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 MCM10Q7L590 875 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 SNX21Q969T3 373 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
SMTN-202ENST00000347557 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.49
SMTN-202ENST00000347557 TRIM44Q96DX7 344 aaPredicted RBP18.08■□□□□ 0.49
SMTN-202ENST00000347557 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.49
SMTN-202ENST00000347557 SULT6B1Q6IMI4 303 aa18.08■□□□□ 0.48
SMTN-202ENST00000347557 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
SMTN-202ENST00000347557 PIK3C2BO00750 1634 aa18.08■□□□□ 0.48
SMTN-202ENST00000347557 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
SMTN-202ENST00000347557 GAS2L3Q86XJ1 694 aa18.07■□□□□ 0.48
SMTN-202ENST00000347557 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
SMTN-202ENST00000347557 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
SMTN-202ENST00000347557 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
SMTN-202ENST00000347557 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
SMTN-202ENST00000347557 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
SMTN-202ENST00000347557 FOXD4L5Q5VV16 416 aaPredicted RBP18.06■□□□□ 0.48
SMTN-202ENST00000347557 FOXD4L4Q8WXT5 416 aaPredicted RBP18.06■□□□□ 0.48
SMTN-202ENST00000347557 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
SMTN-202ENST00000347557 ARHGAP45Q92619 1136 aa18.05■□□□□ 0.48
SMTN-202ENST00000347557 WASLO00401 505 aaPredicted RBP18.05■□□□□ 0.48
SMTN-202ENST00000347557 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
SMTN-202ENST00000347557 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
SMTN-202ENST00000347557 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
SMTN-202ENST00000347557 PLEKHM2Q8IWE5 1019 aa18.05■□□□□ 0.48
SMTN-202ENST00000347557 ZFYVE9O95405 1425 aa18.04■□□□□ 0.48
SMTN-202ENST00000347557 GOLGA6L22H0YM25 854 aa18.04■□□□□ 0.48
SMTN-202ENST00000347557 ABCC4O15439 1325 aa18.03■□□□□ 0.48
SMTN-202ENST00000347557 MCTP1Q6DN14 999 aa18.03■□□□□ 0.48
SMTN-202ENST00000347557 DDIT3P35638 169 aa18.02■□□□□ 0.48
SMTN-202ENST00000347557 CIZ1Q9ULV3 898 aaPredicted RBP18.02■□□□□ 0.48
SMTN-202ENST00000347557 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.47
SMTN-202ENST00000347557 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
SMTN-202ENST00000347557 HSP90AA2PQ14568 343 aaPredicted RBP18.01■□□□□ 0.47
SMTN-202ENST00000347557 MEIS3Q99687 375 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 ARHGEF40Q8TER5 1519 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
SMTN-202ENST00000347557 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
SMTN-202ENST00000347557 F6X3S4 739 aa18■□□□□ 0.47
SMTN-202ENST00000347557 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
SMTN-202ENST00000347557 ARHGAP31Q2M1Z3 1444 aa18■□□□□ 0.47
SMTN-202ENST00000347557 SLC4A2P04920 1241 aa18■□□□□ 0.47
SMTN-202ENST00000347557 PDIA4P13667 645 aaKnown RBP18■□□□□ 0.47
SMTN-202ENST00000347557 BRPF1P55201 1214 aaPredicted RBP18■□□□□ 0.47
SMTN-202ENST00000347557 TSHZ3Q63HK5 1081 aa18■□□□□ 0.47
SMTN-202ENST00000347557 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
SMTN-202ENST00000347557 DCTPP1Q9H773 170 aa17.99■□□□□ 0.47
SMTN-202ENST00000347557 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
SMTN-202ENST00000347557 SDSP20132 328 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 PKP1Q13835 747 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 SKOR2Q2VWA4 1001 aaPredicted RBP17.98■□□□□ 0.47
SMTN-202ENST00000347557 ESPNB1AK53 854 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 CHAMP1Q96JM3 812 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 MED14O60244 1454 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 BAG4O95429 457 aaKnown RBP17.98■□□□□ 0.47
SMTN-202ENST00000347557 EIF4A2Q14240 407 aaKnown RBP17.98■□□□□ 0.47
SMTN-202ENST00000347557 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 CASC1Q6TDU7 716 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 RIMS2Q9UQ26 1411 aa17.98■□□□□ 0.47
SMTN-202ENST00000347557 TPRNQ4KMQ1 711 aa17.97■□□□□ 0.47
SMTN-202ENST00000347557 INTS3Q68E01 1043 aaKnown RBP17.97■□□□□ 0.47
SMTN-202ENST00000347557 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
SMTN-202ENST00000347557 FOXO3O43524 673 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms