RNA–Protein interactions for RNA: ENST00000344850.8

GTDC1-202, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-202ENST00000344850 IRF6O14896 467 aa6.39□□□□□ -1.39
GTDC1-202ENST00000344850 ROCK1Q13464 1354 aa6.39□□□□□ -1.39
GTDC1-202ENST00000344850 LRPPRCP42704 1394 aaKnown RBP6.38□□□□□ -1.39
GTDC1-202ENST00000344850 TNS1Q9HBL0 1735 aaKnown RBP6.38□□□□□ -1.39
GTDC1-202ENST00000344850 CCER1Q8TC90 406 aaPredicted RBP6.38□□□□□ -1.39
GTDC1-202ENST00000344850 NRAPQ86VF7 1730 aa6.38□□□□□ -1.39
GTDC1-202ENST00000344850 VPS8Q8N3P4 1428 aa6.38□□□□□ -1.39
GTDC1-202ENST00000344850 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 POM121Q96HA1 1249 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 PHF8Q9UPP1 1060 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 USP32Q8NFA0 1604 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 TECPR2O15040 1411 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 ABCA3Q99758 1704 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 NINLQ9Y2I6 1382 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 PCDHB8Q9UN66 801 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 PCDHB13Q9Y5F0 798 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 BRWD3Q6RI45 1802 aa6.37□□□□□ -1.39
GTDC1-202ENST00000344850 SPDYE1Q8NFV5 336 aaPredicted RBP6.36□□□□□ -1.39
GTDC1-202ENST00000344850 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
GTDC1-202ENST00000344850 RRBP1Q9P2E9 1410 aaKnown RBP6.36□□□□□ -1.39
GTDC1-202ENST00000344850 CFAP65Q6ZU64 1925 aaKnown RBP6.36□□□□□ -1.39
GTDC1-202ENST00000344850 PLCH1Q4KWH8 1693 aa6.36□□□□□ -1.39
GTDC1-202ENST00000344850 SPDYE16A6NNV3 312 aaPredicted RBP6.36□□□□□ -1.39
GTDC1-202ENST00000344850 EFCAB3Q8N7B9 438 aa6.36□□□□□ -1.39
GTDC1-202ENST00000344850 C11orf95C9JLR9 678 aaPredicted RBP6.35□□□□□ -1.39
GTDC1-202ENST00000344850 SH3D19Q5HYK7 790 aa6.35□□□□□ -1.39
GTDC1-202ENST00000344850 KCNA1Q09470 495 aa6.35□□□□□ -1.39
GTDC1-202ENST00000344850 RBM33Q96EV2 1170 aaKnown RBP6.35□□□□□ -1.39
GTDC1-202ENST00000344850 FMN2Q9NZ56 1722 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 PRR29P0C7W0 189 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 SLC26A8Q96RN1 970 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 USP21Q9UK80 565 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 COL14A1Q05707 1796 aaKnown RBP6.34□□□□□ -1.39
GTDC1-202ENST00000344850 ACIN1Q9UKV3 1341 aaKnown RBP6.34□□□□□ -1.39
GTDC1-202ENST00000344850 ZNF579Q8NAF0 562 aaKnown RBP6.34□□□□□ -1.39
GTDC1-202ENST00000344850 SIRT1Q96EB6 747 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
GTDC1-202ENST00000344850 SBNO1A3KN83 1393 aa6.34□□□□□ -1.39
GTDC1-202ENST00000344850 VPS72Q15906 364 aa6.33□□□□□ -1.4
GTDC1-202ENST00000344850 RPGRIP1LQ68CZ1 1315 aa6.33□□□□□ -1.4
GTDC1-202ENST00000344850 PDIA6Q15084 440 aa6.33□□□□□ -1.4
GTDC1-202ENST00000344850 NUTM2BA6NNL0 878 aaPredicted RBP6.32□□□□□ -1.4
GTDC1-202ENST00000344850 NUTM2EB1AL46 878 aaPredicted RBP6.32□□□□□ -1.4
GTDC1-202ENST00000344850 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
GTDC1-202ENST00000344850 NUTM2DQ5VT03 806 aaPredicted RBP6.32□□□□□ -1.4
GTDC1-202ENST00000344850 NUTM2AQ8IVF1 878 aaPredicted RBP6.32□□□□□ -1.4
GTDC1-202ENST00000344850 CCDC144AA2RUR9 1427 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 ANKRD50Q9ULJ7 1429 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 NUP188Q5SRE5 1749 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 MS4A1P11836 297 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 IFFO2Q5TF58 517 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 COG6Q9Y2V7 657 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 NPHP3Q7Z494 1330 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 COL24A1Q17RW2 1714 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 CRYBG1Q9Y4K1 1723 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 KIF1BO60333 1816 aa6.32□□□□□ -1.4
GTDC1-202ENST00000344850 UNC5CLQ8IV45 518 aa6.31□□□□□ -1.4
GTDC1-202ENST00000344850 GIGYF2Q6Y7W6 1299 aaKnown RBP6.31□□□□□ -1.4
GTDC1-202ENST00000344850 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
GTDC1-202ENST00000344850 PPLO60437 1756 aa6.31□□□□□ -1.4
GTDC1-202ENST00000344850 CASZ1Q86V15 1759 aa6.31□□□□□ -1.4
GTDC1-202ENST00000344850 SPDYE5A6NIY4 337 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 GNPATO15228 680 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 BRD1O95696 1058 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 OXER1Q8TDS5 423 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 C8orf37Q96NL8 207 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 BAG6P46379 1132 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 SKIV2LQ15477 1246 aaKnown RBP6.3□□□□□ -1.4
GTDC1-202ENST00000344850 CABP2Q9NPB3 220 aa6.3□□□□□ -1.4
GTDC1-202ENST00000344850 DPYSL4O14531 572 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 SF3B2Q13435 895 aaKnown RBP6.29□□□□□ -1.4
GTDC1-202ENST00000344850 MAP3K5Q99683 1374 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 BCL9O00512 1426 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 ANKARQ7Z5J8 1434 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 ARHGEF10O15013 1369 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 TRPM3Q9HCF6 1732 aaPredicted RBP6.29□□□□□ -1.4
GTDC1-202ENST00000344850 IFT172Q9UG01 1749 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 NUTM2FA1L443 756 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
GTDC1-202ENST00000344850 DLC1Q96QB1 1528 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 ALS2Q96Q42 1657 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 METP08581 1390 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 CLTCL1P53675 1640 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 QSER1Q2KHR3 1735 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 TNS3Q68CZ2 1445 aa6.28□□□□□ -1.4
GTDC1-202ENST00000344850 SPATA31A3Q5VYP0 1347 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 HIC1Q14526 733 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 CCDC27Q2M243 656 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 MS4A4AQ96JQ5 239 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 TSPYL2Q9H2G4 693 aaPredicted RBP6.27□□□□□ -1.41
GTDC1-202ENST00000344850 CLEC11AQ9Y240 323 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 USTQ9Y2C2 406 aa6.27□□□□□ -1.41
GTDC1-202ENST00000344850 EMILIN3Q9NT22 766 aa6.26□□□□□ -1.41
GTDC1-202ENST00000344850 ABCC11Q96J66 1382 aa6.26□□□□□ -1.41
GTDC1-202ENST00000344850 PARP4Q9UKK3 1724 aaKnown RBP6.26□□□□□ -1.41
GTDC1-202ENST00000344850 FCHSD2O94868 740 aa6.26□□□□□ -1.41
GTDC1-202ENST00000344850 BANK1Q8NDB2 785 aa6.26□□□□□ -1.41
GTDC1-202ENST00000344850 EIF3AQ14152 1382 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms