RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
PHTF2-203ENST00000307305 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
PHTF2-203ENST00000307305 FANCAO15360 1455 aa13.79□□□□□ -0.2
PHTF2-203ENST00000307305 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 RTEL1-TNFRSF6BF6WH68 1400 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 USHBP1Q8N6Y0 703 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 SPC24Q8NBT2 197 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 PLCH2O75038 1416 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
PHTF2-203ENST00000307305 TRMT2AQ8IZ69 625 aaKnown RBP13.77□□□□□ -0.2
PHTF2-203ENST00000307305 USP19O94966 1318 aa13.77□□□□□ -0.2
PHTF2-203ENST00000307305 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 GNAI2P04899 355 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 CSB-PGBD3P0DP91 1061 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 VAMP4O75379 141 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 ZNF592Q92610 1267 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 SLC52A1Q9NWF4 448 aa13.77□□□□□ -0.21
PHTF2-203ENST00000307305 ANXA1P04083 346 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 SDSP20132 328 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 CWC27Q6UX04 472 aaKnown RBP13.76□□□□□ -0.21
PHTF2-203ENST00000307305 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 SIL1Q9H173 461 aa13.76□□□□□ -0.21
PHTF2-203ENST00000307305 IFIT2P09913 472 aaKnown RBP13.75□□□□□ -0.21
PHTF2-203ENST00000307305 NUP160Q12769 1436 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
PHTF2-203ENST00000307305 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 DUOX2Q9NRD8 1548 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 FOXO3O43524 673 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 HDGFL1Q5TGJ6 251 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 KDM4AO75164 1064 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 CEBPZQ03701 1054 aaKnown RBP13.75□□□□□ -0.21
PHTF2-203ENST00000307305 STK3Q13188 491 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 A0A1W2PP64 1363 aa13.75□□□□□ -0.21
PHTF2-203ENST00000307305 CD2BP2O95400 341 aaKnown RBP13.75□□□□□ -0.21
PHTF2-203ENST00000307305 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
PHTF2-203ENST00000307305 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.74□□□□□ -0.21
PHTF2-203ENST00000307305 MRPL50Q8N5N7 158 aaKnown RBP13.74□□□□□ -0.21
PHTF2-203ENST00000307305 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
PHTF2-203ENST00000307305 PHF14O94880 888 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 SRGAP3O43295 1099 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 ABTB2Q8N961 1025 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 ZNF830Q96NB3 372 aaPredicted RBP13.73□□□□□ -0.21
PHTF2-203ENST00000307305 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 PPFIA3O75145 1194 aa13.73□□□□□ -0.21
PHTF2-203ENST00000307305 ZBTB7BO15156 539 aaPredicted RBP13.72□□□□□ -0.21
PHTF2-203ENST00000307305 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 PKP1Q13835 747 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
PHTF2-203ENST00000307305 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 GPATCH3Q96I76 525 aa13.72□□□□□ -0.21
PHTF2-203ENST00000307305 LRRFIP2Q9Y608 721 aaKnown RBP13.72□□□□□ -0.21
PHTF2-203ENST00000307305 H3BQV1 296 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 GNAI3P08754 354 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 TTC22Q5TAA0 569 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 TSPY26PQ9H489 355 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 CD109Q6YHK3 1445 aa13.71□□□□□ -0.21
PHTF2-203ENST00000307305 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.22
PHTF2-203ENST00000307305 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
PHTF2-203ENST00000307305 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
PHTF2-203ENST00000307305 PTPRTO14522 1441 aa13.7□□□□□ -0.22
PHTF2-203ENST00000307305 PLEKHM2Q8IWE5 1019 aa13.7□□□□□ -0.22
PHTF2-203ENST00000307305 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
PHTF2-203ENST00000307305 UQCRHP07919 91 aa13.7□□□□□ -0.22
PHTF2-203ENST00000307305 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
PHTF2-203ENST00000307305 G2E3Q7L622 706 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 ANTXR1Q9H6X2 564 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 PRDM10Q9NQV6 1147 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 MX1P20591 662 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
PHTF2-203ENST00000307305 CLCN1P35523 988 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 FAM184AQ8NB25 1140 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 USP25Q9UHP3 1055 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 WASLO00401 505 aaPredicted RBP13.68□□□□□ -0.22
PHTF2-203ENST00000307305 RAB3GAP1Q15042 981 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 CAMK4Q16566 473 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
PHTF2-203ENST00000307305 INSRP06213 1382 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
PHTF2-203ENST00000307305 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 NPHP1O15259 732 aa13.68□□□□□ -0.22
PHTF2-203ENST00000307305 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms