RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
ATP1A1-201ENST00000295598 TPRNQ4KMQ1 711 aa16.17■□□□□ 0.18
ATP1A1-201ENST00000295598 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 NUCB1Q02818 461 aa16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 HSCBQ8IWL3 235 aa16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 PANK2Q9BZ23 570 aa16.16■□□□□ 0.18
ATP1A1-201ENST00000295598 ZC3H13Q5T200 1668 aaKnown RBP16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 FOXD4L5Q5VV16 416 aaPredicted RBP16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 FOXD4L4Q8WXT5 416 aaPredicted RBP16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 MYO3AQ8NEV4 1616 aa16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 NLRP1Q9C000 1473 aa16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 LTKP29376 864 aa16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 GNAI1P63096 354 aa16.15■□□□□ 0.18
ATP1A1-201ENST00000295598 ACEP12821 1306 aa16.14■□□□□ 0.17
ATP1A1-201ENST00000295598 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
ATP1A1-201ENST00000295598 PNNQ9H307 717 aaKnown RBP16.14■□□□□ 0.17
ATP1A1-201ENST00000295598 G2E3Q7L622 706 aa16.14■□□□□ 0.17
ATP1A1-201ENST00000295598 COL3A1P02461 1466 aaPredicted RBP16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 NOL8Q76FK4 1167 aaKnown RBP16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 TBC1D9Q6ZT07 1266 aa16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 CHAMP1Q96JM3 812 aa16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 MEIS3Q99687 375 aa16.13■□□□□ 0.17
ATP1A1-201ENST00000295598 LRRC7Q96NW7 1537 aa16.12■□□□□ 0.17
ATP1A1-201ENST00000295598 DTNBO60941 627 aa16.12■□□□□ 0.17
ATP1A1-201ENST00000295598 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
ATP1A1-201ENST00000295598 NEO1Q92859 1461 aa16.12■□□□□ 0.17
ATP1A1-201ENST00000295598 NGDNQ8NEJ9 315 aaKnown RBP16.12■□□□□ 0.17
ATP1A1-201ENST00000295598 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
ATP1A1-201ENST00000295598 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
ATP1A1-201ENST00000295598 MCM4P33991 863 aa16.1■□□□□ 0.17
ATP1A1-201ENST00000295598 ZMYM3Q14202 1370 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 ALDH1L2Q3SY69 923 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 CPS1P31327 1500 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 ROBO2Q9HCK4 1378 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 IL16Q14005 1332 aa16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
ATP1A1-201ENST00000295598 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.17
ATP1A1-201ENST00000295598 AMPHP49418 695 aa16.08■□□□□ 0.17
ATP1A1-201ENST00000295598 EXOC6BQ9Y2D4 811 aa16.08■□□□□ 0.16
ATP1A1-201ENST00000295598 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.16
ATP1A1-201ENST00000295598 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
ATP1A1-201ENST00000295598 TRAK2O60296 914 aa16.07■□□□□ 0.16
ATP1A1-201ENST00000295598 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
ATP1A1-201ENST00000295598 ARHGAP31Q2M1Z3 1444 aa16.07■□□□□ 0.16
ATP1A1-201ENST00000295598 FAM135BQ49AJ0 1406 aa16.07■□□□□ 0.16
ATP1A1-201ENST00000295598 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
ATP1A1-201ENST00000295598 NEURL4Q96JN8 1562 aa16.06■□□□□ 0.16
ATP1A1-201ENST00000295598 XPCQ01831 940 aaPredicted RBP16.06■□□□□ 0.16
ATP1A1-201ENST00000295598 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
ATP1A1-201ENST00000295598 LMOD2Q6P5Q4 547 aa16.06■□□□□ 0.16
ATP1A1-201ENST00000295598 CHMP5Q9NZZ3 219 aa16.06■□□□□ 0.16
ATP1A1-201ENST00000295598 NLRP6P59044 892 aa16.05■□□□□ 0.16
ATP1A1-201ENST00000295598 NCLP19338 710 aaKnown RBP16.05■□□□□ 0.16
ATP1A1-201ENST00000295598 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
ATP1A1-201ENST00000295598 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
ATP1A1-201ENST00000295598 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
ATP1A1-201ENST00000295598 ANXA1P04083 346 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 AAMPQ13685 434 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 SSFA2P28290 1259 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 PREX1Q8TCU6 1659 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 KIF2CQ99661 725 aa16.04■□□□□ 0.16
ATP1A1-201ENST00000295598 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 ZFYVE9O95405 1425 aa16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 CALD1Q05682 793 aaKnown RBP16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 PKP1Q13835 747 aa16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
ATP1A1-201ENST00000295598 ADGRB2O60241 1585 aa16.02■□□□□ 0.16
ATP1A1-201ENST00000295598 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.15
ATP1A1-201ENST00000295598 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 MSH6P52701 1360 aa16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 RICTORQ6R327 1708 aa16.01■□□□□ 0.15
ATP1A1-201ENST00000295598 EYA1Q99502 592 aa16■□□□□ 0.15
ATP1A1-201ENST00000295598 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
ATP1A1-201ENST00000295598 GCC1Q96CN9 775 aa16■□□□□ 0.15
ATP1A1-201ENST00000295598 ABCC4O15439 1325 aa16■□□□□ 0.15
ATP1A1-201ENST00000295598 IL1RAPL2Q9NP60 686 aa16■□□□□ 0.15
ATP1A1-201ENST00000295598 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 LARP6Q9BRS8 491 aaKnown RBP15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 RRAGDQ9NQL2 400 aaPredicted RBP15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 CLTCQ00610 1675 aaKnown RBP15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 SDSP20132 328 aa15.99■□□□□ 0.15
ATP1A1-201ENST00000295598 CEP85Q6P2H3 762 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms