RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 STK11IPQ8N1F8 1099 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 DACH1Q9UI36 760 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 A0A1B0GUL7 405 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 NEXNQ0ZGT2 675 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-201ENST00000265641 TBC1D32Q96NH3 1257 aa12.67□□□□□ -0.38
CPT1A-201ENST00000265641 CEP57L1Q8IYX8 460 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 NF2P35240 595 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 MAP3K11Q16584 847 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
CPT1A-201ENST00000265641 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
CPT1A-201ENST00000265641 TRIM29Q14134 588 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 LUZP1Q86V48 1076 aa12.66□□□□□ -0.38
CPT1A-201ENST00000265641 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
CPT1A-201ENST00000265641 ERC2O15083 957 aa12.65□□□□□ -0.38
CPT1A-201ENST00000265641 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
CPT1A-201ENST00000265641 ZSCAN31Q96LW9 406 aaPredicted RBP12.65□□□□□ -0.38
CPT1A-201ENST00000265641 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
CPT1A-201ENST00000265641 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
CPT1A-201ENST00000265641 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CPT1A-201ENST00000265641 GNAI1P63096 354 aa12.65□□□□□ -0.38
CPT1A-201ENST00000265641 MVPQ14764 893 aaKnown RBP12.65□□□□□ -0.38
CPT1A-201ENST00000265641 GGT6Q6P531 493 aa12.65□□□□□ -0.39
CPT1A-201ENST00000265641 GOLGA6L10A0A0M3HER8 536 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 MNAT1P51948 309 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 ANKRD1Q15327 319 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 CRACR2AQ9BSW2 395 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 NPHP1O15259 732 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 SLFN5Q08AF3 891 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 SYNE3Q6ZMZ3 975 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 KIF3BO15066 747 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 ERLIN2O94905 339 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
CPT1A-201ENST00000265641 DMTNQ08495 405 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 PDILTQ8N807 584 aa12.64□□□□□ -0.39
CPT1A-201ENST00000265641 CFAP43Q8NDM7 1665 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 PTPRGP23470 1445 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 SNX21Q969T3 373 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
CPT1A-201ENST00000265641 MAGI1Q96QZ7 1491 aaPredicted RBP12.63□□□□□ -0.39
CPT1A-201ENST00000265641 FIBPO43427 364 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
CPT1A-201ENST00000265641 PAIP2Q9BPZ3 127 aaKnown RBP12.63□□□□□ -0.39
CPT1A-201ENST00000265641 HIP1O00291 1037 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 MPNDQ8N594 471 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
CPT1A-201ENST00000265641 CTAGE5O15320 804 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 ZSCAN23Q3MJ62 389 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 BAG4O95429 457 aaKnown RBP12.62□□□□□ -0.39
CPT1A-201ENST00000265641 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
CPT1A-201ENST00000265641 SNAPC4Q5SXM2 1469 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPT1A-201ENST00000265641 NCOA1Q15788 1441 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
CPT1A-201ENST00000265641 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
CPT1A-201ENST00000265641 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
CPT1A-201ENST00000265641 ADCY5O95622 1261 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 CHD1LQ86WJ1 897 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
CPT1A-201ENST00000265641 TUBBP07437 444 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 JMYQ8N9B5 988 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 MYCBPQ99417 103 aaPredicted RBP12.6□□□□□ -0.39
CPT1A-201ENST00000265641 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
CPT1A-201ENST00000265641 PPFIBP1Q86W92 1011 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPT1A-201ENST00000265641 PCMTD1Q96MG8 357 aaPredicted RBP12.6□□□□□ -0.39
CPT1A-201ENST00000265641 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 A0A0G2JS52 829 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 LMAN1P49257 510 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
CPT1A-201ENST00000265641 LUC7LQ9NQ29 371 aaKnown RBP12.6□□□□□ -0.39
CPT1A-201ENST00000265641 ZNF644Q9H582 1327 aaPredicted RBP12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CASQ1P31415 396 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CPLX1O14810 134 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 SERPINC1P01008 464 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CNTROBQ8N137 903 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 CCDC150Q8NCX0 1101 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 TROQ12816 1431 aaPredicted RBP12.59□□□□□ -0.39
CPT1A-201ENST00000265641 MTHFSP49914 203 aa12.59□□□□□ -0.39
CPT1A-201ENST00000265641 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
CPT1A-201ENST00000265641 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
CPT1A-201ENST00000265641 LIG1P18858 919 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
CPT1A-201ENST00000265641 RBM33Q96EV2 1170 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms