RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 NME9Q86XW9 330 aa21.3■■□□□ 1
H2AFV-201ENST00000222690 KIDINS220Q9ULH0 1771 aa21.3■■□□□ 1
H2AFV-201ENST00000222690 ERBB4Q15303 1308 aa21.29■■□□□ 1
H2AFV-201ENST00000222690 SMARCA5O60264 1052 aaPredicted RBP21.28■■□□□ 1
H2AFV-201ENST00000222690 NASPP49321 788 aaPredicted RBP21.28■■□□□ 1
H2AFV-201ENST00000222690 NEURL4Q96JN8 1562 aa21.28■■□□□ 1
H2AFV-201ENST00000222690 KRT24Q2M2I5 525 aa21.28■■□□□ 1
H2AFV-201ENST00000222690 IFT172Q9UG01 1749 aa21.27■■□□□ 1
H2AFV-201ENST00000222690 SLC52A1Q9NWF4 448 aa21.27■■□□□ 1
H2AFV-201ENST00000222690 HSP90AA2PQ14568 343 aaPredicted RBP21.27■■□□□ 1
H2AFV-201ENST00000222690 CAVIN1Q6NZI2 390 aaKnown RBP21.27■■□□□ 1
H2AFV-201ENST00000222690 API5Q9BZZ5 524 aaKnown RBP21.27■■□□□ 1
H2AFV-201ENST00000222690 OTUD7AQ8TE49 926 aaPredicted RBP21.26■□□□□ 0.99
H2AFV-201ENST00000222690 NUTM2FA1L443 756 aa21.26■□□□□ 0.99
H2AFV-201ENST00000222690 GSPT1P15170 499 aaKnown RBP21.25■□□□□ 0.99
H2AFV-201ENST00000222690 MLECQ14165 292 aa21.25■□□□□ 0.99
H2AFV-201ENST00000222690 DDIT3P35638 169 aa21.25■□□□□ 0.99
H2AFV-201ENST00000222690 ADGRB2O60241 1585 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 BAG4O95429 457 aaKnown RBP21.24■□□□□ 0.99
H2AFV-201ENST00000222690 TPRNQ4KMQ1 711 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 SLC4A10Q6U841 1118 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 NOL8Q76FK4 1167 aaKnown RBP21.24■□□□□ 0.99
H2AFV-201ENST00000222690 ZNF428Q96B54 188 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 PPLO60437 1756 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
H2AFV-201ENST00000222690 CASC1Q6TDU7 716 aa21.23■□□□□ 0.99
H2AFV-201ENST00000222690 PLEKHM2Q8IWE5 1019 aa21.23■□□□□ 0.99
H2AFV-201ENST00000222690 ISY1Q9ULR0 285 aaKnown RBP21.23■□□□□ 0.99
H2AFV-201ENST00000222690 LMTK2Q8IWU2 1503 aa21.22■□□□□ 0.99
H2AFV-201ENST00000222690 POGZQ7Z3K3 1410 aa21.22■□□□□ 0.99
H2AFV-201ENST00000222690 PTMSP20962 102 aa21.22■□□□□ 0.99
H2AFV-201ENST00000222690 PKP1Q13835 747 aa21.22■□□□□ 0.99
H2AFV-201ENST00000222690 GLIPR1L2Q4G1C9 344 aa21.21■□□□□ 0.99
H2AFV-201ENST00000222690 ARHGAP45Q92619 1136 aa21.21■□□□□ 0.99
H2AFV-201ENST00000222690 COG3Q96JB2 828 aa21.21■□□□□ 0.99
H2AFV-201ENST00000222690 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
H2AFV-201ENST00000222690 ABCC3O15438 1527 aa21.21■□□□□ 0.99
H2AFV-201ENST00000222690 MSNP26038 577 aaKnown RBP21.21■□□□□ 0.99
H2AFV-201ENST00000222690 FOXD4L6Q3SYB3 417 aaPredicted RBP21.2■□□□□ 0.98
H2AFV-201ENST00000222690 FOXD4L3Q6VB84 417 aaPredicted RBP21.2■□□□□ 0.98
H2AFV-201ENST00000222690 CAMSAP1Q5T5Y3 1602 aa21.2■□□□□ 0.98
H2AFV-201ENST00000222690 LMOD3Q0VAK6 560 aa21.2■□□□□ 0.98
H2AFV-201ENST00000222690 RABEP1Q15276 862 aa21.2■□□□□ 0.98
H2AFV-201ENST00000222690 CHAMP1Q96JM3 812 aa21.2■□□□□ 0.98
H2AFV-201ENST00000222690 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
H2AFV-201ENST00000222690 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
H2AFV-201ENST00000222690 PRPF40AO75400 957 aaKnown RBP21.2■□□□□ 0.98
H2AFV-201ENST00000222690 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
H2AFV-201ENST00000222690 MCM10Q7L590 875 aa21.19■□□□□ 0.98
H2AFV-201ENST00000222690 NCOA3Q9Y6Q9 1424 aa21.19■□□□□ 0.98
H2AFV-201ENST00000222690 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
H2AFV-201ENST00000222690 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 TTC22Q5TAA0 569 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
H2AFV-201ENST00000222690 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 TXNDC2Q86VQ3 553 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 AEBP1Q8IUX7 1158 aa21.18■□□□□ 0.98
H2AFV-201ENST00000222690 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
H2AFV-201ENST00000222690 ST18O60284 1047 aa21.17■□□□□ 0.98
H2AFV-201ENST00000222690 ABCC4O15439 1325 aa21.17■□□□□ 0.98
H2AFV-201ENST00000222690 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
H2AFV-201ENST00000222690 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
H2AFV-201ENST00000222690 IL13P35225 146 aa21.16■□□□□ 0.98
H2AFV-201ENST00000222690 SDSP20132 328 aa21.16■□□□□ 0.98
H2AFV-201ENST00000222690 TSHZ3Q63HK5 1081 aa21.16■□□□□ 0.98
H2AFV-201ENST00000222690 NUCB2P80303 420 aa21.16■□□□□ 0.98
H2AFV-201ENST00000222690 KLHL40Q2TBA0 621 aa21.16■□□□□ 0.98
H2AFV-201ENST00000222690 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
H2AFV-201ENST00000222690 PNPLA6Q8IY17 1366 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 DCTPP1Q9H773 170 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 MEIS3Q99687 375 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 FAM135BQ49AJ0 1406 aa21.15■□□□□ 0.98
H2AFV-201ENST00000222690 USP26Q9BXU7 913 aa21.14■□□□□ 0.97
H2AFV-201ENST00000222690 FRMPD1Q5SYB0 1578 aa21.13■□□□□ 0.97
H2AFV-201ENST00000222690 CD163L1Q9NR16 1453 aa21.13■□□□□ 0.97
H2AFV-201ENST00000222690 ZFYVE9O95405 1425 aa21.13■□□□□ 0.97
H2AFV-201ENST00000222690 BRPF1P55201 1214 aaPredicted RBP21.13■□□□□ 0.97
H2AFV-201ENST00000222690 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
H2AFV-201ENST00000222690 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
H2AFV-201ENST00000222690 SLC4A2P04920 1241 aa21.12■□□□□ 0.97
H2AFV-201ENST00000222690 MLH3Q9UHC1 1453 aa21.12■□□□□ 0.97
H2AFV-201ENST00000222690 F6X3S4 739 aa21.12■□□□□ 0.97
H2AFV-201ENST00000222690 AK9Q5TCS8 1911 aa21.12■□□□□ 0.97
H2AFV-201ENST00000222690 RNF214Q8ND24 703 aa21.12■□□□□ 0.97
H2AFV-201ENST00000222690 NEK4P51957 841 aa21.11■□□□□ 0.97
H2AFV-201ENST00000222690 ZSCAN23Q3MJ62 389 aa21.11■□□□□ 0.97
H2AFV-201ENST00000222690 PTPRMP28827 1452 aa21.11■□□□□ 0.97
H2AFV-201ENST00000222690 ZNF853P0CG23 659 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 REC8O95072 547 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 CEP85Q6P2H3 762 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 ANKRD44Q8N8A2 993 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
H2AFV-201ENST00000222690 RILPL2Q969X0 211 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 ARID3AQ99856 593 aa21.1■□□□□ 0.97
H2AFV-201ENST00000222690 EXOC6BQ9Y2D4 811 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms